FFCP PHASE1:Hg19::chr17:7077571..7077586,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:7077571..7077586,- | |||
|description=CAGE_peak_at_chr17:7077571..7077586,- | |||
|id=chr17:7077571..7077586,- | |||
|ontology_enrichment_celltype=CL:0002057!1.89e-17!42;CL:0000860!1.90e-15!45;CL:0002009!3.52e-13!65;CL:0002194!2.64e-12!63;CL:0000576!2.64e-12!63;CL:0000040!2.64e-12!63;CL:0000559!2.64e-12!63;CL:0000557!7.06e-12!71;CL:0000839!1.02e-11!70;CL:0000766!2.53e-11!76;CL:0000134!2.54e-08!358;CL:0002320!4.90e-08!365;CL:0000048!6.07e-08!430;CL:0000763!1.05e-07!112;CL:0000049!1.05e-07!112;CL:0000723!1.25e-07!436;CL:0000034!1.56e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.12e-29;33!CL:0002057;9.12e-29;33!CL:0000576;3.71e-24;48!CL:0000473;5.67e-21;39!CL:0000234;5.67e-21;39!CL:0000766;3.79e-15;69!CL:0002393;7.88e-11;6!CL:0002397;7.88e-11;6!CL:0000346;1.38e-07;3!CL:1000428;1.38e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.82e-39,42;CL:0002057,7.82e-39,42;CL:0000473,1.00e-35,48;CL:0000234,1.00e-35,48;CL:0002009,6.08e-30,61;CL:0002194,5.62e-29,59;CL:0000576,5.62e-29,59;CL:0000040,5.62e-29,59;CL:0000559,5.62e-29,59;CL:0000557,1.66e-26,67;CL:0000766,6.14e-26,72;CL:0000839,4.83e-25,66;CL:0000763,1.23e-15,108;CL:0000049,1.23e-15,108;CL:0002087,4.85e-14,115;CL:0000738,1.92e-13,136;CL:0002031,4.07e-12,120;CL:0002393,1.09e-09,9;CL:0002397,1.09e-09,9;CL:0000134,2.84e-09,354;CL:0000037,3.44e-09,168;CL:0002320,7.92e-09,361;CL:0000723,1.02e-08,433;CL:0000048,1.59e-08,427;CL:0002032,1.83e-08,161;CL:0000837,1.83e-08,161;CL:0000219,2.29e-08,386;CL:0000988,2.72e-08,177;CL:0000034,2.76e-08,441;CL:0000346,7.93e-08,3;CL:1000428,7.93e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002057;5.51e-27;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.01e-12!102;UBERON:0003061!4.01e-12!102;UBERON:0002371!3.40e-11!80;UBERON:0002193!3.14e-10!112;UBERON:0001474!4.13e-10!86;UBERON:0003081!4.28e-10!216;UBERON:0004765!2.38e-09!101;UBERON:0001434!2.38e-09!101;UBERON:0002204!1.49e-08!167;UBERON:0002405!7.14e-08!115;UBERON:0002384!7.40e-08!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;1.38e-07;3!UBERON:0001992;1.38e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.90e-26,76;UBERON:0002390,1.91e-25,98;UBERON:0003061,1.91e-25,98;UBERON:0001474,4.90e-25,82;UBERON:0002193,3.87e-22,108;UBERON:0004765,5.43e-22,90;UBERON:0002405,1.94e-19,93;UBERON:0001434,7.03e-19,100;UBERON:0003081,4.53e-18,203;UBERON:0002204,1.07e-13,167;UBERON:0000926,5.77e-13,315;UBERON:0004120,5.77e-13,315;UBERON:0006603,5.77e-13,315;UBERON:0002384,9.42e-09,371;UBERON:0000412,7.93e-08,3;UBERON:0001992,7.93e-08,3 | |||
|phase1_expression=0.363356758541113,0.856402095563933,0.140954404095971,2.00146596706261,1.78784437770915,1.74467704820074,0,1.26343974685366,0.261185628199839,0.982935746006035,0,0.655324116390517,0.263766978228454,0.37129905888014,0.331397375727916,0,0,2.19093027116212,0,0.123121058076788,0.204000691244253,0.313454721478088,0,0.136874425072884,0.125542639594803,0,0,0,1.18009283054671,0.767658796194425,0.619264493264304,0,0,0.739508020333575,0.154934401160603,0,0,4.43196326825502,1.20326668482085,0.651032612147555,0,0,1.28787783817093,1.89017710413434,1.51150377475524,3.15359279544161,0.697287110717054,2.05583944010913,1.23882548358041,1.43846196161075,1.0246428261164,2.12834006899727,1.03423704220986,3.22742341791913,1.35426486594342,0.376484679085209,0.818718450173537,0.449446968890169,0.612167784741805,1.28371610830437,0.639337125799041,0,1.59570926097305,1.27867425159808,0.580418477257168,0,0,1.25624332628372,1.0429658368404,1.3031330682307,0,1.47311054395026,2.21523671208619,3.16882929467913,1.4882300997553,5.87044207423452,6.40273197535022,7.2084908563923,4.018139667427,0,1.19350006319454,0.730656615058536,0,0,0,0,0.400395987036012,1.14950487990897,0,0,0.569212969109448,0.587237189370939,0.764546456250458,0,0,0.526768169550154,0.393419540227666,0.393010762749165,0.205601498999509,0,0,0,5.84480185223734,0.222820913770347,0.294605907474837,0.221533894583621,0.812411591295047,0,0.130059347559878,0.164437904603676,0,0.289803085735052,0.14828656316206,0.267540828089713,2.09071047609954,0.113309342697566,0,0,0.253019692019503,0,0,0,0.150575119077773,0,0,0.710331756132051,0,0.201606743224732,0,0,0,0,0.12786256184353,0,0.50133791063589,0.434539556882471,0.795285947051099,1.94653948121054,0.0945348171640679,0.443458794925128,0.351339142772504,0.0654895377488563,0.728590576585084,0.370784442784429,0.324547393654683,0.174129737299267,0.26591592103773,0.238490624305342,0,0,0,0,0,0,0.419499436209906,0.550236083880135,0.208994966536811,0.258416759169329,0.71153252537342,0,0.402829317109147,0,0.488124115096339,0,0,0,0,0,0,0.949265659568129,0.916008719652036,0,0,0,0,0.25326102332916,0,0.860509862246441,0.709336764396714,0.560677600142307,3.20246987189115,0.49333509683432,0,0.134710672069688,0,0.302714855289863,0,0.234321431833797,0,0.570471821544449,0,0.117434498643765,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0,0.277064115484183,0,0.30648779579902,0.300476117813194,0.113432183160021,0,0.640672166455702,0.847727604638247,0.300091096084402,0,0.257640540045629,0.18611685633159,0.675105328965065,0,0,0,0,0.355009592516614,0.201504196455281,0.67824236924195,0,0.272746120590835,0,0.121973706129595,0.132529768321485,0,0.10366105501537,0.252320850875628,0,1.56449532329816,1.28648187638577,1.38134921352481,0.928735856063958,0,0.591534000199219,0.505754070234305,0.482022059766964,0,0.435758888184812,0,0.269662616320329,0.196221465125346,0,0,0,1.2347220339942,1.47008711385542,1.26755034821831,1.96565443335525,1.18157981336281,0,0.122988438543114,0.343135620597051,0,1.1240175325762,0,0,0.325808305310325,1.03993478527958,0,0.115930404975077,0,0.288732895522148,0,0,0,1.71697232418975,0.246217006087397,0.234004265139238,0.297262324577456,0,0.16798212819886,0.141775097242386,0.0895585227028483,0.290633938513962,0,0,0.088048434013226,0.414656231081544,0,0.25248486685276,0.126995788584338,0,1.17217447210047,3.4214489204541,0,0,0,0,0,0,0.258543431515556,3.57656445851882,0.845302752556,1.06375246633948,1.04007436911366,0.257207374262142,1.41849132023278,0,0,2.17048642156577,0.823240336780769,0,0,0,1.20575750823834,0,0.199945982364114,0,0.502257091432126,2.10833939483032,0.718874566474748,0,0,0.144781306667579,0,0.179060963239896,0.224170287987055,0.197030760201927,0,0.256686072559497,0,0,0,0,0,0,2.99161459204025,0,0,0,0,0.207970861530807,0.178428988797162,0,0.234282829985426,0.601892199455438,0,0,0,0,0.173767228936166,0.195801157462741,0,1.44737618286021,1.2942852049117,0.74709290462411,0,8.32177197552485,0.30239029332968,0,0.153461973288062,0.841980283299221,0.128139149255701,0,0.64341568457443,0,0.154209693802656,0.177561725313127,0,0,0.116210378459959,0,0.200506470303285,0.184161977871793,0.114814448164607,0.182091168006717,0.393373244878272,0.451199612907412,0,1.56869953835371,0,0,0,0.340187410553031,0,1.54227252690289,0.541892875087706,0.501689773854853,0,0.831076008928724,0,0.219259876645935,0.261435451024901,0,0.328014645699706,0,0.206082023295445,0,0,0,0.650060246036521,0,0.096670718292122,0,0.15350367472613,0,0.214840489736547,0.290033387828457,0.0852266274161009,0,0,0,0,0,2.32422774648643,0,0,0,0,0,0.9266210955196,0,0.372158369359667,0.316379424718726,0.38126038784765,0.767693373934002,0.855877976067841,0,4.70969184119538,0.359744915166629,0,0.353437207037059,0.202182481573316,1.58510321173008,0,0.48763373908959,0,0,0,0.424216295861138,1.13008116620243,0,0,0.876901770507525,2.89387767133344,0.655894752046633,0,0.30982349809975,0.563391205064483,0,0.294747123039363,0.35667105148125,0,0.633322905892992,0.329294892959902,0.75894634753143,0.349934720244983,0,0.670302275535787,0,0.0941438007767792,1.29151611801369,0,0.886860307073351,0.229723400206959,1.01489521846434,0,0.569647187174163,0.476463550915578,0.411362273086194,1.94541993357815,0.540031437238115,0.79312517629427,0.106824071127473,0,0.490080431962063,0,0,0,0.159426272728822,0,0,0.211673582723883,0.649243880549111,0,0,0,0,0.338583555603207,0.321176150207399,0,0.851692475380653,0.343505344755765,0,0,0.166849141711909,0,0.278406173895242,0,0.270455678475983,0,0,0.18714054040822,0.293016358543788,0.121360521749513,0.111443384277478,0,1.19372242368845,0.593929361665277,0.307160702099232,0.994147647766298,0.140669416410513,0,0.329607748453519,0,0,0,0,0.102268682502155,0,0.311039587661807,0,0,0.511572370226872,0.0986434056369336,2.3948309234694,1.11136990144637,0.969332746095218,0.278304294485554,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0.995213339381022,0.591095237907095,0.438770794307945,0,0,0.0769502585037971,0.113942055847001,0,0,0.217294743844016,0,0.183195186803725,2.66517388009317,0,0,0.166211681900156,0,0,0,0,0,0.632994193584081,0.163232808159148,0,0,0,0.0884575645033392,0,0,0,0,0,0.802577647298789,0,0.182454789215666,0,0,0,0,0,0.126373159256976,0,0.103688191397247,0,0.330991955875499,0,0,0,0,0.520679215005393,0,0,0.17472666824203,0.171986032471617,0,0,0.0821154570532092,0,0,0.225980740780532,0.274083849293502,0,0,0.195551382734803,0,0.213452994739353,0,0.288180834308212,0.114536596165916,0.171594997861965,0,0,0,0.135904206073614,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0.458320848023367,0,0.199679000498991,0,0.89268582976749,0,0,0,0.0787831823072236,0,0.0674035438541849,0.0984274815147488,0,0,0,0.321506296930038,0,0.415440338029185,0.674921674654501,1.5476039091159,0.0607495566580247,0.335434687599266,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0.511164065356265,0.113312091520126,0.439656701034247,0,0.129282956361551,0.13223260174269,0,0,0,0,0.828478110694391,0,0.197611631897944,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0.221858103073705,0.0620964029413835,0,0,0,0.285465333544967,0,0,0.144921028610825,0.298509605773748,0,0.554805861502613,0,0.251567901752575,0,0,0.302461847526478,0.15543720058278,0.147855149989634,0,0.449803112163605,0,0.829412415681711,0.265841714557995,0,0,0.761610424337591,0.406870733204662,0.181848659202559,0.214821114084977,0.464033759878494,0.796191777397232,0,0,0.336749488765919,0,0,0,0.260994291965212,0.226705925512272,0,0.734210113519403,0,0.926404341482917,0,0,0,0,0,0,0,0,0.194860308839388,0.265729680626726,0.163565394255844,0.327609848846413,0,0,0.19998739585493,0.106691729694141,0.172214979660816,0,0.736423801007363,0.279759015438889,0,0,0,0,0,0,0.212574920101683,0.247871528518004,0,0,0,0,2.1160556621441,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0.366857197043358,0.115525666150338,0,0,0.198916222116275,0.0752103283492573,0,0,0,0,0,0,0,0.206686796501184,0.126831620387814,0.546974809018219,0,1.48863353516788,0.175871244359621,0.255524855279191,0,0.336283722218824,0,0,0.0887023701626388,0,0.171488009437418,0,0,0.236387681767936,0.111231401892069,0,0,0,0,0.215927591218621,1.43325506366115,0.285906176706625,0,0,0.173858272302579,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0.4582137370881,0.93061915699296,0,0,0,0.121917924982269,0.647428837187895,0.102662806856247,1.1598144313382,0.485710993059139,0.233939463462106,0.198950775161368,0,0,0,0.301925687133347,0.0771741581079447,0,0.470317296361523,0,0,0,0,0,0,0,0.257831551894309,0,0.357107877211315,0.352894871715692,0,0,0.458729283404541,0,0,0,0,1.0580536810308,0.743990036333503,0.924351257262837,0,0,0.218531143927391,0.126698501011437,0.203977659483963,0,0,0,0.0757786982182394,1.07185652062471,0,0,0.213233981900981,0.23806443146374,0.129177819672012,0,0,0.0636471582781649,0.808468755832877,0.217716747896961,0,0,0,0,0.0814032686109745,0.106727345877715,0,0.0898252021065869,0,0.244482888365733,0,0.665756774185513,0.201273793591026,0.320568492303233 | |||
|short_description=p@chr17:7077571..7077586,- | |||
}} |
Latest revision as of 20:34, 25 July 2015
Short description: | p@chr17:7077571..7077586, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:7077571..7077586, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.90e-26 | 76 |
hematopoietic system | 1.91e-25 | 98 |
blood island | 1.91e-25 | 98 |
bone element | 4.90e-25 | 82 |
hemolymphoid system | 3.87e-22 | 108 |
skeletal element | 5.43e-22 | 90 |
immune system | 1.94e-19 | 93 |
skeletal system | 7.03e-19 | 100 |
lateral plate mesoderm | 4.53e-18 | 203 |
musculoskeletal system | 1.07e-13 | 167 |
mesoderm | 5.77e-13 | 315 |
mesoderm-derived structure | 5.77e-13 | 315 |
presumptive mesoderm | 5.77e-13 | 315 |
connective tissue | 9.42e-09 | 371 |
dermal papilla | 7.93e-08 | 3 |
papillary layer of dermis | 7.93e-08 | 3 |