FFCP PHASE1:Hg19::chr1:209979449..209979460,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3664 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6121 | |||
|TSSclassifier=strong | |||
|UniProt=F5GWX8 | |||
|association_with_transcript=4bp_to_ENST00000542854_5end | |||
|coexpression_cluster_id=C226 | |||
|description=CAGE_peak_3_at_IRF6_5end | |||
|id=chr1:209979449..209979460,- | |||
|ontology_enrichment_celltype=CL:0000066!7.57e-25!254;CL:0002076!1.99e-24!43;CL:0000223!9.31e-17!59;CL:0002251!3.21e-13!21;CL:0002368!1.03e-12!13;CL:0002159!1.29e-10!13;CL:0002202!1.54e-08!9;CL:0002632!1.54e-08!9;CL:0002077!5.00e-07!33 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.30e-21;42!CL:0002368;1.23e-17;13!CL:0002251;5.50e-16;20!CL:0002202;1.00e-11;9!CL:0002632;1.00e-11;9!CL:0002159;1.71e-11;14!CL:0000244;1.09e-08;4!CL:0000731;1.09e-08;4!CL:0002327;1.42e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.40e-29,42;CL:0000066,4.78e-23,253;CL:0000223,3.79e-20,58;CL:0002368,1.57e-17,13;CL:0002251,5.49e-16,20;CL:0002202,1.24e-11,9;CL:0002632,1.24e-11,9;CL:0002159,1.55e-11,14;CL:0000244,1.09e-08,4;CL:0000731,1.09e-08,4;CL:0002327,1.42e-07,4;CL:0000076,8.85e-07,63 | |||
|ontology_enrichment_development_v019=CL:0000223;9.14e-11;58 | |||
|ontology_enrichment_disease=DOID:1749!1.13e-14!14;DOID:305!1.07e-11!106;DOID:0050687!6.53e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:1749;9.80e-18;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,6.52e-18,14;DOID:305,2.12e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.41e-24!169;UBERON:0000925!1.41e-24!169;UBERON:0006595!1.41e-24!169;UBERON:0001007!3.06e-18!155;UBERON:0001555!3.06e-18!155;UBERON:0007026!3.06e-18!155;UBERON:0001004!7.80e-16!72;UBERON:0004921!6.56e-15!129;UBERON:0004185!6.56e-15!129;UBERON:0000161!2.28e-13!35;UBERON:0000464!6.28e-13!104;UBERON:0000077!1.05e-12!130;UBERON:0000166!7.56e-11!21;UBERON:0005911!1.50e-10!82;UBERON:0005153!1.55e-10!37;UBERON:0000466!2.10e-10!126;UBERON:0000065!5.15e-10!53;UBERON:0005178!2.77e-09!34;UBERON:0002224!2.77e-09!34;UBERON:0005181!7.69e-09!35;UBERON:0000344!1.35e-08!12;UBERON:0001041!3.01e-08!98;UBERON:0000165!3.41e-08!28;UBERON:0000930!3.41e-08!28;UBERON:0000062!6.37e-08!511;UBERON:0005156!1.04e-07!59;UBERON:0000990!1.04e-07!59;UBERON:0005157!1.31e-07!51;UBERON:0000365!1.64e-07!5;UBERON:0005631!1.83e-07!14;UBERON:0000158!1.83e-07!14;UBERON:0007196!2.98e-07!14;UBERON:0001558!2.98e-07!14;UBERON:0001008!3.32e-07!45;UBERON:0003102!3.54e-07!95;UBERON:0003729!6.67e-07!5;UBERON:0006554!8.51e-07!44 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;6.74e-12;33!UBERON:0001555;3.77e-11;54!UBERON:0000161;3.09e-10;19!UBERON:0000166;3.09e-10;19!UBERON:0000344;5.00e-10;20!UBERON:0000365;5.21e-10;5!UBERON:0000165;6.46e-10;28!UBERON:0005911;1.34e-09;36!UBERON:0000974;2.21e-09;6!UBERON:0000486;2.55e-09;12!UBERON:0004807;2.31e-08;22!UBERON:0005910;3.23e-08;6!UBERON:0003729;6.19e-08;13!UBERON:0007196;6.44e-08;15!UBERON:0001558;6.44e-08;15!UBERON:0005178;1.15e-07;34!UBERON:0002224;1.15e-07;34!UBERON:0001041;1.15e-07;14!UBERON:0001911;1.42e-07;4!UBERON:0003343;2.17e-07;4!UBERON:0004785;2.17e-07;4!UBERON:0005409;2.51e-07;22!UBERON:0005181;3.71e-07;35!UBERON:0005631;4.74e-07;10!UBERON:0000158;4.74e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,5.40e-23,160;UBERON:0000925,5.40e-23,160;UBERON:0006595,5.40e-23,160;UBERON:0001007,6.97e-17,145;UBERON:0001555,6.97e-17,145;UBERON:0007026,6.97e-17,145;UBERON:0001004,6.95e-15,74;UBERON:0004921,1.34e-12,118;UBERON:0000166,1.50e-11,22;UBERON:0000161,2.20e-11,36;UBERON:0000344,4.79e-10,20;UBERON:0000365,5.78e-10,5;UBERON:0000065,6.73e-10,54;UBERON:0000165,2.24e-09,29;UBERON:0000930,2.24e-09,29;UBERON:0003102,1.26e-08,99;UBERON:0005178,1.48e-08,34;UBERON:0002224,1.48e-08,34;UBERON:0005153,2.09e-08,37;UBERON:0005181,3.40e-08,35;UBERON:0005910,3.52e-08,6;UBERON:0003729,5.67e-08,13;UBERON:0000153,6.35e-08,62;UBERON:0007811,6.35e-08,62;UBERON:0005911,7.20e-08,82;UBERON:0007196,7.47e-08,15;UBERON:0001558,7.47e-08,15;UBERON:0005157,8.56e-08,47;UBERON:0001911,1.42e-07,4;UBERON:0005333,1.42e-07,4;UBERON:0008425,1.42e-07,4;UBERON:0005311,1.42e-07,4;UBERON:0001041,1.70e-07,87;UBERON:0003343,2.09e-07,4;UBERON:0004785,2.09e-07,4;UBERON:0000974,5.14e-07,10;UBERON:0004807,5.39e-07,28;UBERON:0000033,7.47e-07,56 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,2.45733936501509,0.697801167972428,1.74753097704138,4.48403862988371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,5.51652734687356,8.13255980701275,6.28581817283539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,11.6574492253614,7.78647329847302,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,10.4662572514208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337552664482532,0.194874010322397,0,0,0,0,0,0,7.73043412653187,7.63689137654337,8.60413786167011,0.609868530647977,0.662648841607426,0.69716365721711,0.310983165046111,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33678033231916,0,7.02401826615204,7.86812272803337,7.23808601363742,8.24037161910913,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74935335947108,4.03157107677263,2.69372684760534,6.00042102109084,4.65014301622339,9.96794965829549,0,0,0.207328115540772,0,0,0,0,1.17217447210047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,5.01266175758212,6.44566922551274,0,0,0,2.25599806453706,1.15523005656622,0,0,0.316654886678627,0,0,0,0,0,0,1.27438136522519,2.49322802678617,0.671624264166535,0,0,0,0,0,0.309123034943167,0,0,8.03971753194641,6.50060246036521,0,0,0,0,0,0,0,0,0,6.28082678371717,5.95789208831829,4.59405764980503,5.2602046044886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.48466042535419,7.37332503089366,8.71127878890581,0.659006605437454,11.6236450621232,8.42357378338128,18.6240664485404,11.7158934105549,0,0,0,0,0,0,0,0,0,0,4.90080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61996756571508,0,0,0,0,6.20735660317994,1.18785872333055,6.75753544618311,0,0,0,0,1.26675244876796,0,1.65770349318689,1.0077309914171,0,0,0,0.988551862620595,0.895105873378046,0,1.1837208676432,0,0,0,0,0,1.30213880542617,2.44887999989348,0,3.41380344856499,1.01701460117107,1.65471377237555,0,0,0,0,0,1.52581736317083,0.663475559587348,1.18219047581419,0,0,3.90386483980089,1.23120413606075,0,0.23056390438806,0.718061155278177,0.651884231532048,1.27600463892768,0.824378340616761,4.26427820814908,0,0,0,0,0,0,0,0,0,0.979396848954886,0.848118428603645,0,3.98104772431402,3.27292988662355,3.05515072466813,0,0,0,0,0,0,0,5.47860933009851,0,1.57833761139756,3.62972148145992,0,0,0,0,0,0,0,0,0,0,2.77695581336209,7.34942980607832,5.65884842772617,1.39781334593624,0,0,0,0,4.75246180793255,0,2.25980740780532,0,0,0,1.36885967914362,0.881747022766871,1.92107695265417,0,2.16135625731159,0,0,0,0,7.07082103850386,0,0,0,0,0,0,0,0,0,0,0,0,1.39775300349294,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.687697182986169,0,1.349843349309,9.2856234546954,0,7.04412843958459,0.945668487590378,0.629455057619977,0,0,1.91915197319445,0,0,0,0,0,0,0,0.082092520749339,0,0,0.146552233678082,0,0,0,0,2.11444506695002,0.427149650270779,0.314408610199332,1.65695622138878,0,0,0,3.83004754662109,0,0,0,0,0.471162288750703,0,0,0,0,0,0.0620964029413835,0,0,0,0,0.235265819698172,0,0.869526171664951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47918486351039,0,0,0,0,0,4.19638523158333,7.46492712039567,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,3.53331786603692,5.5445769973438,3.11828617486854,6.93153996902029,0,0,0,0.225630985047772,0,0.781514011233092,0.785720083444267,0,2.21784129325568,0,0,0.206686796501184,0,0,1.09651553371436,0.496211178389294,0,4.85497225030462,0.535701835878287,0,0,0.455324382702595,2.21755925406597,0,0,0,0,0.236387681767936,0.889851215136553,1.0989032999072,0,0.840816489941367,0,0,0,0,0,0,0,0,1.24329698497822,0.85359238546975,2.07377898544228,2.58136415292167,0,0,1.69354820076372,0.68732060563215,0,0,1.90154234056247,1.66855397145913,1.82876887473404,0,0,0,2.91426595835484,1.16969731731053,0.397901550322736,0,0.67767649223376,0,2.2644426535001,4.24457869593696,2.62271472604749,0.940634592723046,0.490296643507811,0.471353094203252,0,0,0,0,0,0,0,4.82095634235275,3.52894871715692,0.240724100067505,6.57302749421866,0.458729283404541,0,0,0,0,2.645134202577,0,0,0,0,0,0,1.73381010561369,0.534434810531121,2.02168778976659,0.752122617877125,0.303114792872958,0,0,0,1.70587185520785,1.66645102024618,0.645889098360061,1.30356900021302,0,1.20929600728513,1.21270313374932,2.39488422686657,2.39563310759697,3.30025059771479,2.29511057256564,0.99798106963804,3.01192093860606,0,0,0,7.03922827210363,0.122241444182866,2.03448089157869,0.665756774185513,0.201273793591026,0 | |||
|short_description=p3@IRF6 | |||
}} |
Revision as of 00:01, 11 January 2014
Short description: | p3@IRF6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_IRF6_5end |
Coexpression cluster: | C226_Corneal_Keratinocyte_Esophageal_Urothelial_Mammary_Bronchial_Tracheal |
Association with transcript: | 4bp_to_ENST00000542854_5end |
EntrezGene: | IRF6 |
HGNC: | 6121 |
UniProt: | F5GWX8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.40e-29 | 42 |
epithelial cell | 4.78e-23 | 253 |
endodermal cell | 3.79e-20 | 58 |
respiratory epithelial cell | 1.57e-17 | 13 |
epithelial cell of alimentary canal | 5.49e-16 | 20 |
epithelial cell of tracheobronchial tree | 1.24e-11 | 9 |
epithelial cell of lower respiratory tract | 1.24e-11 | 9 |
general ecto-epithelial cell | 1.55e-11 | 14 |
transitional epithelial cell | 1.09e-08 | 4 |
urothelial cell | 1.09e-08 | 4 |
mammary gland epithelial cell | 1.42e-07 | 4 |
squamous epithelial cell | 8.85e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 6.52e-18 | 14 |
carcinoma | 2.12e-08 | 106 |