FFCP PHASE1:Hg19::chr1:22973822..22973834,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:22973822..22973834,+ | |||
|coexpression_cluster_id=C67 | |coexpression_cluster_id=C67 | ||
|description=CAGE_peak_at_chr1:22973822..22973834,+ | |description=CAGE_peak_at_chr1:22973822..22973834,+ | ||
|id=chr1:22973822..22973834,+ | |id=chr1:22973822..22973834,+ | ||
|ontology_enrichment_celltype=CL:0002619!2.02e-09!3;CL:0000235!3.41e-09!10 | |ontology_enrichment_celltype=CL:0002619!2.02e-09!3;CL:0000235!3.41e-09!10 | ||
|ontology_enrichment_celltype_v019=CL:0002619;9.74e-39;3!CL:0000235;1.77e-19;6!CL:0000840;5.77e-19;5!CL:0000990;7.37e-13;8!CL:0000451;1.25e-10;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002619,9.75e-39,3;CL:0000235,2.20e-19,6;CL:0000840,4.11e-19,5;CL:0001029,4.11e-19,5;CL:0002194,6.80e-16,59;CL:0000576,6.80e-16,59;CL:0000040,6.80e-16,59;CL:0000559,6.80e-16,59;CL:0002009,2.38e-15,61;CL:0000839,3.95e-14,66;CL:0000557,6.59e-14,67;CL:0000990,5.88e-13,8;CL:0000766,6.93e-13,72;CL:0000451,1.04e-10,10;CL:0000763,2.77e-08,108;CL:0000049,2.77e-08,108;CL:0002087,1.02e-07,115;CL:0002031,2.36e-07,120 | |||
|ontology_enrichment_development_v019=UBERON:0010115;1.33e-13;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000029;6.65e-14;1!UBERON:0002171;6.65e-14;1!UBERON:0006518;6.65e-14;1!UBERON:0008949;6.65e-14;1!UBERON:0000101;6.65e-14;1!UBERON:0002167;6.65e-14;1!UBERON:0002363;1.33e-13;1!UBERON:0002360;1.93e-07;2!UBERON:0000094;1.93e-07;2!UBERON:0010743;1.93e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,1.02e-14,93;UBERON:0000029,5.85e-14,1;UBERON:0002171,7.55e-14,1;UBERON:0006518,7.55e-14,1;UBERON:0008949,7.55e-14,1;UBERON:0000101,7.55e-14,1;UBERON:0002167,7.55e-14,1;UBERON:0002363,1.61e-13,1;UBERON:0007645,1.61e-13,1;UBERON:0007647,1.61e-13,1;UBERON:0010115,1.61e-13,1;UBERON:0002193,1.66e-12,108;UBERON:0002371,3.66e-12,76;UBERON:0002390,2.08e-11,98;UBERON:0003061,2.08e-11,98;UBERON:0001474,3.29e-11,82;UBERON:0004765,3.93e-10,90;UBERON:0001434,5.04e-09,100;UBERON:0002360,2.12e-07,2;UBERON:0000094,2.12e-07,2;UBERON:0010743,2.12e-07,2 | |||
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| ||
|short_description=p@chr1:22973822..22973834,+ | |short_description=p@chr1:22973822..22973834,+ | ||
}} | }} |
Latest revision as of 04:54, 28 July 2015
Short description: | p@chr1:22973822..22973834, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:22973822..22973834, + |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 9.75e-39 | 3 |
macrophage | 2.20e-19 | 6 |
immature conventional dendritic cell | 4.11e-19 | 5 |
common dendritic progenitor | 4.11e-19 | 5 |
monopoietic cell | 6.80e-16 | 59 |
monocyte | 6.80e-16 | 59 |
monoblast | 6.80e-16 | 59 |
promonocyte | 6.80e-16 | 59 |
macrophage dendritic cell progenitor | 2.38e-15 | 61 |
myeloid lineage restricted progenitor cell | 3.95e-14 | 66 |
granulocyte monocyte progenitor cell | 6.59e-14 | 67 |
conventional dendritic cell | 5.88e-13 | 8 |
myeloid leukocyte | 6.93e-13 | 72 |
dendritic cell | 1.04e-10 | 10 |
myeloid cell | 2.77e-08 | 108 |
common myeloid progenitor | 2.77e-08 | 108 |
nongranular leukocyte | 1.02e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 2.36e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
immune system | 1.02e-14 | 93 |
lymph node | 5.85e-14 | 1 |
lower lobe of right lung | 7.55e-14 | 1 |
right lung lobe | 7.55e-14 | 1 |
lower lobe of lung | 7.55e-14 | 1 |
lobe of lung | 7.55e-14 | 1 |
right lung | 7.55e-14 | 1 |
dura mater | 1.61e-13 | 1 |
future meninx | 1.61e-13 | 1 |
ectomeninx | 1.61e-13 | 1 |
future dura mater | 1.61e-13 | 1 |
hemolymphoid system | 1.66e-12 | 108 |
bone marrow | 3.66e-12 | 76 |
hematopoietic system | 2.08e-11 | 98 |
blood island | 2.08e-11 | 98 |
bone element | 3.29e-11 | 82 |
skeletal element | 3.93e-10 | 90 |
skeletal system | 5.04e-09 | 100 |
meninx | 2.12e-07 | 2 |
membrane organ | 2.12e-07 | 2 |
meningeal cluster | 2.12e-07 | 2 |