FFCP PHASE1:Hg19::chr1:22987795..22987818,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C67|description=CAGE_peak_at_chr1:22987795..22987818,-|id=chr1:22987795..22987818,-|ontology_enrichment_celltype=CL:0002619!7.43e-11!3|ontology_enrichment_celltype_v019=CL:0002619;2.96e-47;3!CL:0000840;1.34e-23;5!CL:0000990;5.72e-16;8!CL:0000451;3.48e-13;10!CL:0000235;3.22e-11;6|ontology_enrichment_celltype_v019_2=CL:0002619,2.96e-47,3;CL:0000840,1.34e-23,5;CL:0001029,1.34e-23,5;CL:0000990,5.72e-16,8;CL:0002194,7.83e-16,59;CL:0000576,7.83e-16,59;CL:0000040,7.83e-16,59;CL:0000559,7.83e-16,59;CL:0002009,2.65e-15,61;CL:0000839,4.09e-14,66;CL:0000557,6.73e-14,67;CL:0000451,3.48e-13,10;CL:0000766,6.65e-13,72;CL:0000235,3.39e-11,6;CL:0000763,2.04e-08,108;CL:0000049,2.04e-08,108;CL:0002087,7.27e-08,115;CL:0002031,1.65e-07,120|ontology_enrichment_development_v019=UBERON:0010115;2.43e-16;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.07e-45!115;UBERON:0001049!7.81e-22!57;UBERON:0005068!7.81e-22!57;UBERON:0006241!7.81e-22!57;UBERON:0007135!7.81e-22!57;UBERON:0002616!7.42e-19!59;UBERON:0002780!2.81e-17!41;UBERON:0001890!2.81e-17!41;UBERON:0006240!2.81e-17!41;UBERON:0003080!9.05e-17!42;UBERON:0000955!1.25e-16!69;UBERON:0006238!1.25e-16!69;UBERON:0005743!1.47e-16!86;UBERON:0001017!4.20e-16!82;UBERON:0003075!2.37e-15!86;UBERON:0007284!2.37e-15!86;UBERON:0002020!1.83e-14!34;UBERON:0003528!1.83e-14!34;UBERON:0001893!1.96e-14!34;UBERON:0002346!2.18e-14!90;UBERON:0000073!2.19e-14!94;UBERON:0001016!2.19e-14!94;UBERON:0002791!6.00e-13!33;UBERON:0002298!3.96e-12!8;UBERON:0003056!1.02e-11!61;UBERON:0001869!2.03e-11!32;UBERON:0002308!9.04e-11!9;UBERON:0000125!9.04e-11!9;UBERON:0000153!1.10e-09!129;UBERON:0007811!1.10e-09!129;UBERON:0006331!4.83e-09!3;UBERON:0000988!5.26e-09!3;UBERON:0000033!1.16e-08!123;UBERON:0002619!2.67e-08!22;UBERON:0000062!3.65e-08!511;UBERON:0000200!1.28e-07!6;UBERON:0002420!1.40e-07!9;UBERON:0007245!1.40e-07!9;UBERON:0010009!1.40e-07!9;UBERON:0010011!1.40e-07!9;UBERON:0000454!1.40e-07!9;UBERON:0001950!2.85e-07!20;UBERON:0000956!3.70e-07!25;UBERON:0000203!3.70e-07!25;UBERON:0001897!5.02e-07!2;UBERON:0004177!5.37e-07!7|ontology_enrichment_uberon_v019=UBERON:0002363;2.43e-16;1!UBERON:0002360;7.79e-09;2!UBERON:0000094;7.79e-09;2!UBERON:0010743;7.79e-09;2|ontology_enrichment_uberon_v019_2=UBERON:0002363,2.25e-16,1;UBERON:0007645,2.25e-16,1;UBERON:0007647,2.25e-16,1;UBERON:0010115,2.25e-16,1;UBERON:0002405,1.70e-12,93;UBERON:0002371,3.36e-12,76;UBERON:0002390,7.99e-12,98;UBERON:0003061,7.99e-12,98;UBERON:0001474,2.86e-11,82;UBERON:0002193,1.16e-10,108;UBERON:0004765,3.21e-10,90;UBERON:0001434,3.86e-09,100;UBERON:0002360,7.49e-09,2;UBERON:0000094,7.49e-09,2;UBERON:0010743,7.49e-09,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,38.9612925177468,21.0530882912337,12.8787783817093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,3.57002133020152,2.61194605948901,3.98873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.67812311566055,0.468008530278475,0.743155811443641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.00902836572851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54561517471583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,1.12972560932135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0.234264445725339,0,0,0,0,0,0,1.45329133145522,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0.630445658393585,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0,0.58620893471233,0,0.129282956361551,0.39669780522807,0,0,0.640724475406168,0,0.414239055347196,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0.434674820589684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C67 | |||
|description=CAGE_peak_at_chr1:22987795..22987818,- | |||
|id=chr1:22987795..22987818,- | |||
|ontology_enrichment_celltype=CL:0002619!7.43e-11!3 | |||
|ontology_enrichment_celltype_v019=CL:0002619;2.96e-47;3!CL:0000840;1.34e-23;5!CL:0000990;5.72e-16;8!CL:0000451;3.48e-13;10!CL:0000235;3.22e-11;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002619,2.96e-47,3;CL:0000840,1.34e-23,5;CL:0001029,1.34e-23,5;CL:0000990,5.72e-16,8;CL:0002194,7.83e-16,59;CL:0000576,7.83e-16,59;CL:0000040,7.83e-16,59;CL:0000559,7.83e-16,59;CL:0002009,2.65e-15,61;CL:0000839,4.09e-14,66;CL:0000557,6.73e-14,67;CL:0000451,3.48e-13,10;CL:0000766,6.65e-13,72;CL:0000235,3.39e-11,6;CL:0000763,2.04e-08,108;CL:0000049,2.04e-08,108;CL:0002087,7.27e-08,115;CL:0002031,1.65e-07,120 | |||
|ontology_enrichment_development_v019=UBERON:0010115;2.43e-16;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.07e-45!115;UBERON:0001049!7.81e-22!57;UBERON:0005068!7.81e-22!57;UBERON:0006241!7.81e-22!57;UBERON:0007135!7.81e-22!57;UBERON:0002616!7.42e-19!59;UBERON:0002780!2.81e-17!41;UBERON:0001890!2.81e-17!41;UBERON:0006240!2.81e-17!41;UBERON:0003080!9.05e-17!42;UBERON:0000955!1.25e-16!69;UBERON:0006238!1.25e-16!69;UBERON:0005743!1.47e-16!86;UBERON:0001017!4.20e-16!82;UBERON:0003075!2.37e-15!86;UBERON:0007284!2.37e-15!86;UBERON:0002020!1.83e-14!34;UBERON:0003528!1.83e-14!34;UBERON:0001893!1.96e-14!34;UBERON:0002346!2.18e-14!90;UBERON:0000073!2.19e-14!94;UBERON:0001016!2.19e-14!94;UBERON:0002791!6.00e-13!33;UBERON:0002298!3.96e-12!8;UBERON:0003056!1.02e-11!61;UBERON:0001869!2.03e-11!32;UBERON:0002308!9.04e-11!9;UBERON:0000125!9.04e-11!9;UBERON:0000153!1.10e-09!129;UBERON:0007811!1.10e-09!129;UBERON:0006331!4.83e-09!3;UBERON:0000988!5.26e-09!3;UBERON:0000033!1.16e-08!123;UBERON:0002619!2.67e-08!22;UBERON:0000062!3.65e-08!511;UBERON:0000200!1.28e-07!6;UBERON:0002420!1.40e-07!9;UBERON:0007245!1.40e-07!9;UBERON:0010009!1.40e-07!9;UBERON:0010011!1.40e-07!9;UBERON:0000454!1.40e-07!9;UBERON:0001950!2.85e-07!20;UBERON:0000956!3.70e-07!25;UBERON:0000203!3.70e-07!25;UBERON:0001897!5.02e-07!2;UBERON:0004177!5.37e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002363;2.43e-16;1!UBERON:0002360;7.79e-09;2!UBERON:0000094;7.79e-09;2!UBERON:0010743;7.79e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002363,2.25e-16,1;UBERON:0007645,2.25e-16,1;UBERON:0007647,2.25e-16,1;UBERON:0010115,2.25e-16,1;UBERON:0002405,1.70e-12,93;UBERON:0002371,3.36e-12,76;UBERON:0002390,7.99e-12,98;UBERON:0003061,7.99e-12,98;UBERON:0001474,2.86e-11,82;UBERON:0002193,1.16e-10,108;UBERON:0004765,3.21e-10,90;UBERON:0001434,3.86e-09,100;UBERON:0002360,7.49e-09,2;UBERON:0000094,7.49e-09,2;UBERON:0010743,7.49e-09,2 | |||
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|short_description=p@chr1:22987795..22987818,- | |||
}} |
Revision as of 04:10, 12 September 2013
Short description: | p@chr1:22987795..22987818, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:22987795..22987818, - |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 2.96e-47 | 3 |
immature conventional dendritic cell | 1.34e-23 | 5 |
common dendritic progenitor | 1.34e-23 | 5 |
conventional dendritic cell | 5.72e-16 | 8 |
monopoietic cell | 7.83e-16 | 59 |
monocyte | 7.83e-16 | 59 |
monoblast | 7.83e-16 | 59 |
promonocyte | 7.83e-16 | 59 |
macrophage dendritic cell progenitor | 2.65e-15 | 61 |
myeloid lineage restricted progenitor cell | 4.09e-14 | 66 |
granulocyte monocyte progenitor cell | 6.73e-14 | 67 |
dendritic cell | 3.48e-13 | 10 |
myeloid leukocyte | 6.65e-13 | 72 |
macrophage | 3.39e-11 | 6 |
myeloid cell | 2.04e-08 | 108 |
common myeloid progenitor | 2.04e-08 | 108 |
nongranular leukocyte | 7.27e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 1.65e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
dura mater | 2.25e-16 | 1 |
future meninx | 2.25e-16 | 1 |
ectomeninx | 2.25e-16 | 1 |
future dura mater | 2.25e-16 | 1 |
immune system | 1.70e-12 | 93 |
bone marrow | 3.36e-12 | 76 |
hematopoietic system | 7.99e-12 | 98 |
blood island | 7.99e-12 | 98 |
bone element | 2.86e-11 | 82 |
hemolymphoid system | 1.16e-10 | 108 |
skeletal element | 3.21e-10 | 90 |
skeletal system | 3.86e-09 | 100 |
meninx | 7.49e-09 | 2 |
membrane organ | 7.49e-09 | 2 |
meningeal cluster | 7.49e-09 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.