FFCP PHASE1:Hg19::chr1:66993130..66993141,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:66993130..66993141,+ | |||
|coexpression_cluster_id=C40 | |coexpression_cluster_id=C40 | ||
|description=CAGE_peak_at_chr1:66993130..66993141,+ | |description=CAGE_peak_at_chr1:66993130..66993141,+ | ||
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|ontology_enrichment_celltype=CL:1000306!4.64e-11!4;CL:0002547!4.64e-11!4;CL:0002544!6.83e-08!6;CL:0002586!1.98e-07!3 | |ontology_enrichment_celltype=CL:1000306!4.64e-11!4;CL:0002547!4.64e-11!4;CL:0002544!6.83e-08!6;CL:0002586!1.98e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002097;1.07e-17;2!CL:0000174;2.89e-12;3 | |ontology_enrichment_celltype_v019=CL:0002097;1.07e-17;2!CL:0000174;2.89e-12;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002097,1.07e-17,2;CL:0000174,2.89e-12,3 | |||
|ontology_enrichment_development_v019=UBERON:0003056;7.81e-45;3 | |ontology_enrichment_development_v019=UBERON:0003056;7.81e-45;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5409;1.44e-09;4!DOID:170;8.97e-07;6 | |ontology_enrichment_disease_v019=DOID:5409;1.44e-09;4!DOID:170;8.97e-07;6 | ||
|ontology_enrichment_disease_v019_2=DOID:5409,1.44e-09,4;DOID:170,8.97e-07,6 | |||
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|short_description=p@chr1:66993130..66993141,+ | |short_description=p@chr1:66993130..66993141,+ | ||
}} | }} |
Latest revision as of 10:00, 28 July 2015
Short description: | p@chr1:66993130..66993141, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:66993130..66993141, + |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cortical cell of adrenal gland | 1.07e-17 | 2 |
steroid hormone secreting cell | 2.89e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
retina | 4.86e-23 | 6 |
photoreceptor array | 4.86e-23 | 6 |
posterior segment of eyeball | 4.86e-23 | 6 |
pineal body | 1.27e-17 | 2 |
regional part of epithalamus | 1.27e-17 | 2 |
secretory circumventricular organ | 1.27e-17 | 2 |
circumventricular organ | 1.27e-17 | 2 |
epithalamus | 1.27e-17 | 2 |
eye | 5.40e-15 | 21 |
visual system | 5.40e-15 | 21 |
sense organ | 3.20e-13 | 24 |
sensory system | 3.20e-13 | 24 |
entire sense organ system | 3.20e-13 | 24 |
adrenal gland | 2.89e-12 | 3 |
adrenal cortex | 2.89e-12 | 3 |
adrenal/interrenal gland | 2.89e-12 | 3 |
gland of diencephalon | 1.70e-09 | 4 |
neuroendocrine gland | 1.70e-09 | 4 |
regional part of diencephalon | 1.70e-09 | 4 |
camera-type eye | 1.25e-07 | 20 |
simple eye | 1.25e-07 | 20 |
immature eye | 1.25e-07 | 20 |
ocular region | 1.25e-07 | 20 |
eyeball of camera-type eye | 1.25e-07 | 20 |
optic cup | 1.25e-07 | 20 |
optic vesicle | 1.25e-07 | 20 |
eye primordium | 1.25e-07 | 20 |
face | 5.09e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.44e-09 | 4 |
endocrine gland cancer | 8.97e-07 | 6 |