FFCP PHASE1:Hg19::chr2:216251489..216251515,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C79|description=CAGE_peak_at_chr2:216251489..216251515,+|id=chr2:216251489..216251515,+|ontology_enrichment_celltype=CL:0000055!1.06e-23!180;CL:0000057!6.25e-21!75;CL:0002371!3.57e-17!591;CL:0000144!6.02e-16!625;CL:0000548!1.14e-10!679;CL:0000004!1.14e-10!679;CL:0000255!1.14e-10!679;CL:0000048!1.63e-10!430;CL:0000723!2.80e-10!436;CL:0000012!2.94e-10!682;CL:0000034!1.09e-09!444;CL:0002620!1.28e-09!23;CL:0000183!2.03e-08!59;CL:0000680!3.91e-08!57;CL:0000056!3.91e-08!57;CL:0000355!3.91e-08!57;CL:0000187!4.08e-07!54;CL:0002334!6.84e-07!12|ontology_enrichment_celltype_v019=CL:0000134;2.84e-17;55!CL:0000723;4.04e-16;61!CL:0000048;9.24e-15;58!CL:0000034;1.48e-11;69!CL:0000349;6.20e-11;19!CL:0002334;1.27e-09;12!CL:0002620;9.86e-09;23!CL:0002320;4.33e-08;188!CL:0000188;1.84e-07;9!CL:0002570;1.93e-07;8!CL:0002494;4.26e-07;16!CL:0000057;9.77e-07;73|ontology_enrichment_celltype_v019_2=CL:0000057,1.84e-19,76;CL:0000048,2.87e-17,427;CL:0000723,5.37e-17,433;CL:0000034,5.49e-16,441;CL:0002320,6.20e-14,361;CL:0000134,2.71e-11,354;CL:0000349,1.13e-10,19;CL:0002334,1.17e-09,12;CL:0002620,1.25e-08,23;CL:0000219,2.79e-08,386;CL:0002570,2.05e-07,8;CL:0000188,2.46e-07,9;CL:0002494,3.53e-07,16|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:2394;2.59e-09;14|ontology_enrichment_disease_v019_2=DOID:2394,2.48e-09,14|ontology_enrichment_uberon=UBERON:0005256!5.94e-10!143;UBERON:0000914!9.03e-10!83;UBERON:0002329!9.03e-10!83;UBERON:0003077!9.03e-10!83;UBERON:0003059!9.03e-10!83;UBERON:0007282!9.03e-10!83;UBERON:0009618!9.03e-10!83;UBERON:0007285!9.03e-10!83;UBERON:0000478!3.88e-09!24;UBERON:0004923!4.72e-09!57;UBERON:0004290!1.27e-08!70;UBERON:0002199!3.91e-08!45;UBERON:0002416!3.91e-08!45;UBERON:0005631!4.19e-08!14;UBERON:0000158!4.19e-08!14;UBERON:0001013!5.91e-08!14;UBERON:0003102!3.17e-07!95;UBERON:0002385!3.56e-07!63;UBERON:0001015!3.56e-07!63;UBERON:0000383!3.56e-07!63;UBERON:0000486!3.64e-07!82;UBERON:0004872!4.49e-07!84;UBERON:0002100!7.05e-07!216;UBERON:0001134!7.76e-07!61;UBERON:0002036!7.76e-07!61;UBERON:0003082!7.76e-07!61|ontology_enrichment_uberon_v019=UBERON:0000478;3.31e-10;24!UBERON:0001013;7.40e-10;14!UBERON:0002384;7.90e-09;198!UBERON:0002385;4.49e-08;31!UBERON:0001015;4.49e-08;31!UBERON:0000383;4.49e-08;31!UBERON:0002199;1.15e-07;46!UBERON:0002416;1.15e-07;46!UBERON:0002204;5.36e-07;70!UBERON:0004457;5.71e-07;9!UBERON:0000042;5.71e-07;9!UBERON:0004905;8.17e-07;8!UBERON:0000982;8.17e-07;8!UBERON:0004770;8.17e-07;8|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.15e-14,371;UBERON:0002199,1.16e-10,46;UBERON:0002416,1.16e-10,46;UBERON:0000478,5.03e-10,24;UBERON:0001013,6.39e-10,14;UBERON:0002097,1.24e-07,41;UBERON:0000926,1.42e-07,315;UBERON:0004120,1.42e-07,315;UBERON:0006603,1.42e-07,315;UBERON:0005631,2.63e-07,14;UBERON:0000158,2.63e-07,14;UBERON:0004905,5.73e-07,8;UBERON:0000982,5.73e-07,8;UBERON:0004770,5.73e-07,8;UBERON:0004872,6.92e-07,83|phase1_expression=3.45188920614058,4.49611100171065,1.83240725324762,3.00219895059391,1.78784437770915,1.74467704820074,2.53299878168311,5.05375898741465,1.30592814099919,0.245733936501509,0,0.873765488520689,2.90143676051299,4.82688776544182,1.32558950291166,2.01697543935533,4.21886169616784,4.38186054232424,1.95173119516203,0.369363174230364,0.612002073732759,0.313454721478088,0,0.136874425072884,0.502170558379211,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.38981203585091,5.37022759742827,1.44575660953827,0,3.33146993609895,0.795285947051099,40.8773291054214,0.0945348171640679,1.55210578223795,0.702678285545008,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,2.93649605346934,0.550236083880135,0.208994966536811,0,0,1.00416183829401,0,0,0.732186172644509,0,3.24056779152704,0.17859945656816,0.22452937262617,0,0,0,0,0,0,0,6.95760732373446,3.16576279161449,10.0630977418046,11.7603014507014,5.32002573297536,1.68203280042692,0,11.5933747756065,0.933633106199299,2.42479209725439,4.41347138406339,1.21085942115945,2.88087962239999,0.234321431833797,8.11616199758833,0,11.3580997219369,0.704606991862589,0.971237666208789,0.98315564691574,0.204154171254893,0.61417158655884,0.516628905878827,2.37600571456411,0,0,2.87447256726495,0.505008341862199,0.625592599359821,0,0,1.5324389789951,0.300476117813194,4.19699077692078,3.94657198515496,2.34913127700424,2.7551147150743,2.40072876867522,1.44273540933814,8.24449728146013,0.930584281657949,6.91982962189192,1.65642908774038,7.82544700156755,1.47279837827679,1.2931684545505,3.90510551768276,1.0075209822764,1.01736355386293,0,0,0,0,0,0.116193942869518,0.310983165046111,0,0,1.56449532329816,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C79 | |||
|description=CAGE_peak_at_chr2:216251489..216251515,+ | |||
|id=chr2:216251489..216251515,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.06e-23!180;CL:0000057!6.25e-21!75;CL:0002371!3.57e-17!591;CL:0000144!6.02e-16!625;CL:0000548!1.14e-10!679;CL:0000004!1.14e-10!679;CL:0000255!1.14e-10!679;CL:0000048!1.63e-10!430;CL:0000723!2.80e-10!436;CL:0000012!2.94e-10!682;CL:0000034!1.09e-09!444;CL:0002620!1.28e-09!23;CL:0000183!2.03e-08!59;CL:0000680!3.91e-08!57;CL:0000056!3.91e-08!57;CL:0000355!3.91e-08!57;CL:0000187!4.08e-07!54;CL:0002334!6.84e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000134;2.84e-17;55!CL:0000723;4.04e-16;61!CL:0000048;9.24e-15;58!CL:0000034;1.48e-11;69!CL:0000349;6.20e-11;19!CL:0002334;1.27e-09;12!CL:0002620;9.86e-09;23!CL:0002320;4.33e-08;188!CL:0000188;1.84e-07;9!CL:0002570;1.93e-07;8!CL:0002494;4.26e-07;16!CL:0000057;9.77e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.84e-19,76;CL:0000048,2.87e-17,427;CL:0000723,5.37e-17,433;CL:0000034,5.49e-16,441;CL:0002320,6.20e-14,361;CL:0000134,2.71e-11,354;CL:0000349,1.13e-10,19;CL:0002334,1.17e-09,12;CL:0002620,1.25e-08,23;CL:0000219,2.79e-08,386;CL:0002570,2.05e-07,8;CL:0000188,2.46e-07,9;CL:0002494,3.53e-07,16 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;2.59e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.48e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0005256!5.94e-10!143;UBERON:0000914!9.03e-10!83;UBERON:0002329!9.03e-10!83;UBERON:0003077!9.03e-10!83;UBERON:0003059!9.03e-10!83;UBERON:0007282!9.03e-10!83;UBERON:0009618!9.03e-10!83;UBERON:0007285!9.03e-10!83;UBERON:0000478!3.88e-09!24;UBERON:0004923!4.72e-09!57;UBERON:0004290!1.27e-08!70;UBERON:0002199!3.91e-08!45;UBERON:0002416!3.91e-08!45;UBERON:0005631!4.19e-08!14;UBERON:0000158!4.19e-08!14;UBERON:0001013!5.91e-08!14;UBERON:0003102!3.17e-07!95;UBERON:0002385!3.56e-07!63;UBERON:0001015!3.56e-07!63;UBERON:0000383!3.56e-07!63;UBERON:0000486!3.64e-07!82;UBERON:0004872!4.49e-07!84;UBERON:0002100!7.05e-07!216;UBERON:0001134!7.76e-07!61;UBERON:0002036!7.76e-07!61;UBERON:0003082!7.76e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;3.31e-10;24!UBERON:0001013;7.40e-10;14!UBERON:0002384;7.90e-09;198!UBERON:0002385;4.49e-08;31!UBERON:0001015;4.49e-08;31!UBERON:0000383;4.49e-08;31!UBERON:0002199;1.15e-07;46!UBERON:0002416;1.15e-07;46!UBERON:0002204;5.36e-07;70!UBERON:0004457;5.71e-07;9!UBERON:0000042;5.71e-07;9!UBERON:0004905;8.17e-07;8!UBERON:0000982;8.17e-07;8!UBERON:0004770;8.17e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.15e-14,371;UBERON:0002199,1.16e-10,46;UBERON:0002416,1.16e-10,46;UBERON:0000478,5.03e-10,24;UBERON:0001013,6.39e-10,14;UBERON:0002097,1.24e-07,41;UBERON:0000926,1.42e-07,315;UBERON:0004120,1.42e-07,315;UBERON:0006603,1.42e-07,315;UBERON:0005631,2.63e-07,14;UBERON:0000158,2.63e-07,14;UBERON:0004905,5.73e-07,8;UBERON:0000982,5.73e-07,8;UBERON:0004770,5.73e-07,8;UBERON:0004872,6.92e-07,83 | |||
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| |||
|short_description=p@chr2:216251489..216251515,+ | |||
}} |
Revision as of 16:34, 12 September 2013
Short description: | p@chr2:216251489..216251515, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:216251489..216251515, + |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.84e-19 | 76 |
multi fate stem cell | 2.87e-17 | 427 |
somatic stem cell | 5.37e-17 | 433 |
stem cell | 5.49e-16 | 441 |
connective tissue cell | 6.20e-14 | 361 |
mesenchymal cell | 2.71e-11 | 354 |
extraembryonic cell | 1.13e-10 | 19 |
preadipocyte | 1.17e-09 | 12 |
skin fibroblast | 1.25e-08 | 23 |
motile cell | 2.79e-08 | 386 |
mesenchymal stem cell of adipose | 2.05e-07 | 8 |
cell of skeletal muscle | 2.46e-07 | 9 |
cardiocyte | 3.53e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.15e-14 | 371 |
integument | 1.16e-10 | 46 |
integumental system | 1.16e-10 | 46 |
extraembryonic structure | 5.03e-10 | 24 |
adipose tissue | 6.39e-10 | 14 |
skin of body | 1.24e-07 | 41 |
mesoderm | 1.42e-07 | 315 |
mesoderm-derived structure | 1.42e-07 | 315 |
presumptive mesoderm | 1.42e-07 | 315 |
extraembryonic membrane | 2.63e-07 | 14 |
membranous layer | 2.63e-07 | 14 |
articulation | 5.73e-07 | 8 |
skeletal joint | 5.73e-07 | 8 |
articular system | 5.73e-07 | 8 |
splanchnic layer of lateral plate mesoderm | 6.92e-07 | 83 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.48e-09 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.