FFCP PHASE1:Hg19::chr3:10052869..10052892,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000454232_5end | |association_with_transcript=0bp_to_ENST00000454232_5end | ||
|cluster_id=chr3:10052869..10052892,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_1_at_ENST00000454232_5end | |description=CAGE_peak_1_at_ENST00000454232_5end | ||
|id=chr3:10052869..10052892,- | |id=chr3:10052869..10052892,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;6.17e-09;2!UBERON:0009117;3.33e-07;10!UBERON:0005564;3.33e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.81e-35!57;UBERON:0005068!4.81e-35!57;UBERON:0006241!4.81e-35!57;UBERON:0007135!4.81e-35!57;UBERON:0001017!3.52e-34!82;UBERON:0000955!2.50e-33!69;UBERON:0006238!2.50e-33!69;UBERON:0005743!6.59e-32!86;UBERON:0002616!1.44e-31!59;UBERON:0002346!6.93e-31!90;UBERON:0000073!2.64e-30!94;UBERON:0001016!2.64e-30!94;UBERON:0001869!4.43e-30!32;UBERON:0003075!7.13e-30!86;UBERON:0007284!7.13e-30!86;UBERON:0001893!7.52e-30!34;UBERON:0002791!1.05e-28!33;UBERON:0002020!4.47e-28!34;UBERON:0003528!4.47e-28!34;UBERON:0002780!2.93e-27!41;UBERON:0001890!2.93e-27!41;UBERON:0006240!2.93e-27!41;UBERON:0003080!2.13e-26!42;UBERON:0002619!6.77e-24!22;UBERON:0001950!7.58e-21!20;UBERON:0003056!1.42e-20!61;UBERON:0000956!2.07e-20!25;UBERON:0000203!2.07e-20!25;UBERON:0000033!1.87e-18!123;UBERON:0000924!3.87e-18!173;UBERON:0006601!3.87e-18!173;UBERON:0007023!4.98e-18!115;UBERON:0000153!6.86e-18!129;UBERON:0007811!6.86e-18!129;UBERON:0004121!3.37e-17!169;UBERON:0002420!3.63e-12!9;UBERON:0007245!3.63e-12!9;UBERON:0010009!3.63e-12!9;UBERON:0010011!3.63e-12!9;UBERON:0000454!3.63e-12!9;UBERON:0001871!2.42e-10!7;UBERON:0000025!3.82e-10!194;UBERON:0003076!1.17e-09!15;UBERON:0003057!1.17e-09!15;UBERON:0000349!1.20e-09!5;UBERON:0000483!1.30e-09!309;UBERON:0000119!2.39e-09!312;UBERON:0000200!2.85e-09!6;UBERON:0002308!4.21e-09!9;UBERON:0000125!4.21e-09!9;UBERON:0009663!5.15e-09!7;UBERON:0004733!3.48e-08!12;UBERON:0002028!3.48e-08!12;UBERON:0007277!3.48e-08!12;UBERON:0000369!4.04e-08!4;UBERON:0002435!4.04e-08!4;UBERON:0000204!4.04e-08!4;UBERON:0010082!4.04e-08!4;UBERON:0000475!7.48e-08!365;UBERON:0004111!8.81e-08!241;UBERON:0000477!9.94e-08!286;UBERON:0000064!1.82e-07!219;UBERON:0004732!2.02e-07!13;UBERON:0000481!5.01e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.52e-16;22!UBERON:0002791;1.88e-15;32!UBERON:0001869;2.38e-15;32!UBERON:0000956;1.21e-14;25!UBERON:0000203;1.21e-14;25!UBERON:0002780;3.33e-13;41!UBERON:0001890;3.33e-13;41!UBERON:0002021;3.88e-13;5!UBERON:0003528;4.82e-12;34!UBERON:0002020;4.82e-12;34!UBERON:0001893;6.08e-12;34!UBERON:0001950;6.75e-12;20!UBERON:0000922;5.21e-09;49!UBERON:0001873;6.17e-09;2!UBERON:0002360;6.17e-09;2!UBERON:0001954;6.17e-09;2!UBERON:0000094;6.17e-09;2!UBERON:0003022;6.17e-09;2!UBERON:0002421;6.17e-09;2!UBERON:0002600;6.17e-09;2!UBERON:0010743;6.17e-09;2!UBERON:0000473;8.61e-09;8!UBERON:0001017;4.02e-08;75!UBERON:0000955;1.36e-07;68!UBERON:0000073;1.87e-07;53!UBERON:0002616;1.87e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.55e-16,22;UBERON:0002791,2.65e-16,32;UBERON:0001869,2.65e-16,32;UBERON:0003528,2.32e-15,34;UBERON:0002020,2.32e-15,34;UBERON:0001893,2.32e-15,34;UBERON:0000956,1.23e-14,25;UBERON:0000203,1.23e-14,25;UBERON:0002021,4.96e-13,5;UBERON:0002780,9.04e-13,41;UBERON:0001890,9.04e-13,41;UBERON:0003080,9.04e-13,41;UBERON:0006240,9.04e-13,41;UBERON:0001950,7.57e-12,20;UBERON:0001017,4.46e-11,81;UBERON:0000955,3.38e-10,68;UBERON:0006238,3.38e-10,68;UBERON:0001016,6.29e-10,89;UBERON:0000073,7.00e-10,53;UBERON:0002616,7.00e-10,53;UBERON:0001049,2.39e-09,56;UBERON:0005068,2.39e-09,56;UBERON:0006241,2.39e-09,56;UBERON:0007135,2.39e-09,56;UBERON:0001954,4.70e-09,2;UBERON:0003022,4.70e-09,2;UBERON:0002421,4.70e-09,2;UBERON:0002600,4.70e-09,2;UBERON:0002360,6.94e-09,2;UBERON:0000094,6.94e-09,2;UBERON:0010743,6.94e-09,2;UBERON:0001873,8.09e-09,2;UBERON:0010122,8.09e-09,2;UBERON:0000473,8.62e-09,8;UBERON:0003056,1.42e-08,61 | |||
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| ||
|short_description=p1@ENST00000454232 | |short_description=p1@ENST00000454232 | ||
}} | }} |
Latest revision as of 13:39, 29 July 2015
Short description: | p1@ENST00000454232 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000454232_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000454232_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 1.55e-16 | 22 |
regional part of telencephalon | 2.65e-16 | 32 |
cerebral hemisphere | 2.65e-16 | 32 |
brain grey matter | 2.32e-15 | 34 |
gray matter | 2.32e-15 | 34 |
telencephalon | 2.32e-15 | 34 |
cerebral cortex | 1.23e-14 | 25 |
pallium | 1.23e-14 | 25 |
occipital lobe | 4.96e-13 | 5 |
regional part of forebrain | 9.04e-13 | 41 |
forebrain | 9.04e-13 | 41 |
anterior neural tube | 9.04e-13 | 41 |
future forebrain | 9.04e-13 | 41 |
neocortex | 7.57e-12 | 20 |
central nervous system | 4.46e-11 | 81 |
brain | 3.38e-10 | 68 |
future brain | 3.38e-10 | 68 |
nervous system | 6.29e-10 | 89 |
regional part of nervous system | 7.00e-10 | 53 |
regional part of brain | 7.00e-10 | 53 |
neural tube | 2.39e-09 | 56 |
neural rod | 2.39e-09 | 56 |
future spinal cord | 2.39e-09 | 56 |
neural keel | 2.39e-09 | 56 |
Ammon's horn | 4.70e-09 | 2 |
lobe parts of cerebral cortex | 4.70e-09 | 2 |
hippocampal formation | 4.70e-09 | 2 |
limbic lobe | 4.70e-09 | 2 |
meninx | 6.94e-09 | 2 |
membrane organ | 6.94e-09 | 2 |
meningeal cluster | 6.94e-09 | 2 |
caudate nucleus | 8.09e-09 | 2 |
future caudate nucleus | 8.09e-09 | 2 |
testis | 8.62e-09 | 8 |
pre-chordal neural plate | 1.42e-08 | 61 |