FFCP PHASE1:Hg19::chr4:74609281..74609292,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:74609281..74609292,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_at_chr4:74609281..74609292,+ | |description=CAGE_peak_at_chr4:74609281..74609292,+ | ||
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|ontology_enrichment_celltype=CL:0002057!3.71e-45!42;CL:0000860!1.42e-41!45;CL:0000766!4.18e-37!76;CL:0002009!7.56e-32!65;CL:0002194!6.44e-31!63;CL:0000576!6.44e-31!63;CL:0000040!6.44e-31!63;CL:0000559!6.44e-31!63;CL:0000557!1.96e-28!71;CL:0000839!5.36e-27!70;CL:0000763!8.13e-25!112;CL:0000049!8.13e-25!112;CL:0000738!4.24e-24!140;CL:0002087!1.92e-19!119;CL:0000037!1.66e-18!172;CL:0000566!1.66e-18!172;CL:0000988!7.39e-17!182;CL:0002032!1.66e-16!165;CL:0000837!1.66e-16!165;CL:0002031!6.87e-16!124;CL:0000048!1.21e-14!430;CL:0000034!1.90e-14!444;CL:0000723!3.27e-14!436;CL:0000094!4.56e-12!8;CL:0000134!3.33e-09!358;CL:0000775!5.49e-09!3;CL:0002320!8.91e-09!365;CL:0000081!1.51e-08!11;CL:0000842!6.65e-08!3;CL:0000359!1.61e-07!32;CL:0000219!2.74e-07!390;CL:0000771!7.66e-07!2 | |ontology_enrichment_celltype=CL:0002057!3.71e-45!42;CL:0000860!1.42e-41!45;CL:0000766!4.18e-37!76;CL:0002009!7.56e-32!65;CL:0002194!6.44e-31!63;CL:0000576!6.44e-31!63;CL:0000040!6.44e-31!63;CL:0000559!6.44e-31!63;CL:0000557!1.96e-28!71;CL:0000839!5.36e-27!70;CL:0000763!8.13e-25!112;CL:0000049!8.13e-25!112;CL:0000738!4.24e-24!140;CL:0002087!1.92e-19!119;CL:0000037!1.66e-18!172;CL:0000566!1.66e-18!172;CL:0000988!7.39e-17!182;CL:0002032!1.66e-16!165;CL:0000837!1.66e-16!165;CL:0002031!6.87e-16!124;CL:0000048!1.21e-14!430;CL:0000034!1.90e-14!444;CL:0000723!3.27e-14!436;CL:0000094!4.56e-12!8;CL:0000134!3.33e-09!358;CL:0000775!5.49e-09!3;CL:0002320!8.91e-09!365;CL:0000081!1.51e-08!11;CL:0000842!6.65e-08!3;CL:0000359!1.61e-07!32;CL:0000219!2.74e-07!390;CL:0000771!7.66e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.20e-44;33!CL:0002057;3.20e-44;33!CL:0000473;1.01e-30;39!CL:0000234;1.01e-30;39!CL:0000576;4.41e-26;48!CL:0000766;1.24e-22;69!CL:0000771;3.11e-14;2!CL:0000094;2.77e-13;8!CL:0002393;2.62e-10;6!CL:0002397;2.62e-10;6!CL:0000763;3.10e-10;100!CL:0000081;1.07e-09;11!CL:0002087;1.34e-09;104!CL:0000775;1.44e-09;3!CL:0002592;2.85e-09;3!CL:0000738;6.93e-07;136 | |ontology_enrichment_celltype_v019=CL:0000860;3.20e-44;33!CL:0002057;3.20e-44;33!CL:0000473;1.01e-30;39!CL:0000234;1.01e-30;39!CL:0000576;4.41e-26;48!CL:0000766;1.24e-22;69!CL:0000771;3.11e-14;2!CL:0000094;2.77e-13;8!CL:0002393;2.62e-10;6!CL:0002397;2.62e-10;6!CL:0000763;3.10e-10;100!CL:0000081;1.07e-09;11!CL:0002087;1.34e-09;104!CL:0000775;1.44e-09;3!CL:0002592;2.85e-09;3!CL:0000738;6.93e-07;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.41e-53,42;CL:0002057,6.41e-53,42;CL:0000473,7.86e-46,48;CL:0000234,7.86e-46,48;CL:0000766,2.64e-43,72;CL:0002194,6.68e-36,59;CL:0000576,6.68e-36,59;CL:0000040,6.68e-36,59;CL:0000559,6.68e-36,59;CL:0002009,1.28e-34,61;CL:0000839,9.48e-32,66;CL:0000557,3.16e-31,67;CL:0000763,1.58e-27,108;CL:0000049,1.58e-27,108;CL:0000738,4.94e-23,136;CL:0002087,1.16e-18,115;CL:0000037,8.69e-18,168;CL:0002032,4.85e-17,161;CL:0000837,4.85e-17,161;CL:0000988,1.19e-16,177;CL:0002031,7.44e-16,120;CL:0000771,3.01e-14,2;CL:0000094,2.64e-13,8;CL:0000081,1.03e-09,11;CL:0000775,1.38e-09,3;CL:0002592,3.83e-09,3;CL:0000034,6.18e-09,441;CL:0000048,1.68e-08,427;CL:0000723,2.63e-08,433;CL:0000134,1.44e-07,354;CL:0002320,2.54e-07,361;CL:0002393,5.00e-07,9;CL:0002397,5.00e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;9.15e-39;42!CL:0000049;9.93e-07;108 | |ontology_enrichment_development_v019=CL:0002057;9.15e-39;42!CL:0000049;9.93e-07;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.85e-24!80;UBERON:0002390!7.71e-23!102;UBERON:0003061!7.71e-23!102;UBERON:0002193!1.16e-22!112;UBERON:0001474!5.53e-22!86;UBERON:0002204!1.69e-20!167;UBERON:0004765!9.18e-19!101;UBERON:0001434!9.18e-19!101;UBERON:0003081!8.06e-18!216;UBERON:0002405!8.42e-18!115;UBERON:0002384!3.38e-08!375;UBERON:0000926!1.59e-07!448;UBERON:0004120!1.59e-07!448;UBERON:0006603!1.59e-07!448 | |ontology_enrichment_uberon=UBERON:0002371!2.85e-24!80;UBERON:0002390!7.71e-23!102;UBERON:0003061!7.71e-23!102;UBERON:0002193!1.16e-22!112;UBERON:0001474!5.53e-22!86;UBERON:0002204!1.69e-20!167;UBERON:0004765!9.18e-19!101;UBERON:0001434!9.18e-19!101;UBERON:0003081!8.06e-18!216;UBERON:0002405!8.42e-18!115;UBERON:0002384!3.38e-08!375;UBERON:0000926!1.59e-07!448;UBERON:0004120!1.59e-07!448;UBERON:0006603!1.59e-07!448 | ||
|ontology_enrichment_uberon_v019=UBERON:0003498;2.85e-09;3!UBERON:0005985;2.85e-09;3!UBERON:0001621;2.85e-09;3 | |ontology_enrichment_uberon_v019=UBERON:0003498;2.85e-09;3!UBERON:0005985;2.85e-09;3!UBERON:0001621;2.85e-09;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.98e-27,76;UBERON:0001474,6.92e-25,82;UBERON:0002390,1.46e-22,98;UBERON:0003061,1.46e-22,98;UBERON:0004765,2.33e-22,90;UBERON:0002405,1.60e-21,93;UBERON:0002193,4.04e-20,108;UBERON:0001434,9.22e-20,100;UBERON:0002204,4.52e-16,167;UBERON:0003081,9.26e-14,203;UBERON:0001621,3.83e-09,3;UBERON:0000926,5.23e-09,315;UBERON:0004120,5.23e-09,315;UBERON:0006603,5.23e-09,315;UBERON:0002384,5.46e-07,371 | |||
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| ||
|short_description=p@chr4:74609281..74609292,+ | |short_description=p@chr4:74609281..74609292,+ | ||
}} | }} |
Latest revision as of 06:43, 30 July 2015
Short description: | p@chr4:74609281..74609292, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:74609281..74609292, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.98e-27 | 76 |
bone element | 6.92e-25 | 82 |
hematopoietic system | 1.46e-22 | 98 |
blood island | 1.46e-22 | 98 |
skeletal element | 2.33e-22 | 90 |
immune system | 1.60e-21 | 93 |
hemolymphoid system | 4.04e-20 | 108 |
skeletal system | 9.22e-20 | 100 |
musculoskeletal system | 4.52e-16 | 167 |
lateral plate mesoderm | 9.26e-14 | 203 |
coronary artery | 3.83e-09 | 3 |
mesoderm | 5.23e-09 | 315 |
mesoderm-derived structure | 5.23e-09 | 315 |
presumptive mesoderm | 5.23e-09 | 315 |
connective tissue | 5.46e-07 | 371 |