FFCP PHASE1:Mm9::chr1:174436982..174436991,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1746|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:174436982..174436991,+|id=chr1:174436982..174436991,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000107,1.74e-10,9;CL:0000349,4.45e-08,3;CL:0000351,4.45e-08,3;CL:0000068,1.51e-07,3;CL:0002202,1.51e-07,3;CL:0000069,1.51e-07,3;CL:0002632,1.51e-07,3;CL:0002368,1.51e-07,3;CL:0000307,1.51e-07,3;CL:0000377,1.51e-07,3;CL:0002494,3.30e-07,3;CL:0000737,3.30e-07,3;CL:0000746,3.30e-07,3;CL:0000513,3.30e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005178!5.58e-08!17;UBERON:0005181!5.58e-08!17;UBERON:0002224!5.58e-08!17;UBERON:0000915!5.58e-08!17;UBERON:0008947!5.58e-08!17;UBERON:0003258!5.58e-08!17|ontology_enrichment_uberon_v019_2=UBERON:0002410,1.74e-10,9;UBERON:0005178,1.64e-08,17;UBERON:0005181,1.64e-08,17;UBERON:0002224,1.64e-08,17;UBERON:0000915,1.64e-08,17;UBERON:0008947,1.64e-08,17;UBERON:0003258,1.64e-08,17;UBERON:0000010,2.20e-08,11;UBERON:0000358,4.45e-08,3;UBERON:0000307,4.45e-08,3;UBERON:0007010,4.45e-08,3;UBERON:0003126,1.51e-07,3;UBERON:0001005,1.51e-07,3;UBERON:0007196,1.51e-07,3;UBERON:0001558,1.51e-07,3;UBERON:0000013,7.77e-07,3|phase1_expression=0,0,0.454999239389536,0,0,0.16787927191189,0,0.258246646883153,0.140788722151667,0,0,0.239316476986009,0,0,0.666219523631325,0,0,0.157731082679119,0,0,0.340173160604279,0.0992909512008853,0.783599367416806,0.47997726838022,0.68822784320151,0,0,0.430942465371778,0,0,0,0.635030673459631,0.61506478758457,0,0,0.664938581433969,0,0.418531630736908,0,0,0.588231488031014,0,0.485510353031154,0,0.101376931219515,0.367093504323363,0.782391344348039,0.65407546914134,0.439372365468944,0.194429899074283,0.55994568650145,1.43752564364972,0.167782606057736,0.725362142011344,1.00828139742739,3.08711323243136,2.29226751951005,1.54701627683233,0,0,0,1.35537812827653,0,0.449949858640699,0.988866362566974,0.7104801149461,0.898800331555214,1.92109152660777,0,0,0.630974884054146,0.571301968807607,0.441737081903227,0.244981598429908,0.287536413054709,0,0,0,0.153606533256243,0,0.0914876436024097,0,0,0.56276261003168,0,0,0.142371680799103,0.186399445825301,0.227178579999552,0.302286240427142,0.579728977403356,0,0,0,0,0,0.140444420131752,0.340860645156116,0.779358013808606,3.18005617059306,0,0,0,0,2.38140145112336,2.28023878927589,3.53867111510348,0.22836775943812,0.258937883647172,0.742210695324124,0,0.304465478312141,0.230615497256059,0.904335843315735,0.705532242814229,0,0.494389935468748,0,0.884610551949874,1.29413479957927,1.10420759230197,0.969750506270444,0,0,0,0.255457055208591,1.31796636956512,0.599902730993408,0.381210681219194,0,0,0,0,0,0.20778804455956,0,0.101839363850316,0.746441823660558,0.505445516867349,0.210441855886474,0.520481771850815,0,0,0.150704817835715,0.0680364991513279,0.512454881139399,0.468508622798644,0,0,0.189106080167819,0,0,0.556094498451196,0.696504333044333,0.411564272815887,0.199034266818493,0,0.51469581422943,0.852490498186778,1.03562886267751,0.469052119962192,0.36012412292203,0.23674473558521,0.196764231747404,0,0.232533944750408,0,0.350296027101508,0.493679549740441,0.492502392237286,0.243206428637567,0.292399974850665,0,0.268412837520744,0,0,0.660837565967596,0,0.213288250535234,0.464473343720877,0.128867461322093,1.00841762311671,0.22237804384487,0.190225626112559,3.79623249235609,0.658795818896044,1.25667604400135,0.397912944082302,0.38992817423824,0.898819408654221,2.80979464837102,0.398282546508734,0.189667900953082,0.342745537829186,0,0,0.581857461502877,0.911765658574141,0.379419222745544,0.295220295959204,0.31399745568275,0.123397163921801,0,0.333690211432188,0.589676985339609,0,0.202860121388503,0.72353147925725,0.50925170356284,0,2.10775794807546,0.823684239564244,4.31304619582064,0.372140947668503,0,0,0,0.482443521363367,0.739012760666419,0.37898282354097,0.488894929326078,0.678980343100753,0.704070744865506,1.00503754465089,0.476087281772027,2.34160377429359,0.630540576424764,1.55025282754142,0.956728611944923,1.14704320301017,1.55416483679306,2.31438493730419,3.01582567878545,2.71952841909355,0,0,0,0,0.163934945376675,0.252470927204373,0.94652465824877,0.780877488593277,2.36965737506079,1.91175038362042,1.55959071857676,1.13230612315533,2.02405350837447,2.33804686329049,1.18586333383957,0,0.425820255624806,0.35613120733451,0.325773918707152,0,0,0.242780636154981,0.302323556964751,0.188605079755898,0,0,0,0.363533729477506,0,0.316036757935816,0,0,0,0,0.258717367565509,0,0.177340233642274,0.178368817602071,0.329098041204242,0.304464949114599,0.938686832254841,0.847328283455281,0.220528398054962,0.32977250588296,1.45317984026315,0.301564624640779,0.716234064018819,0,1.45740418314925,0,0.683483523191411,0.619160603889667,0.555583582109135,0,0.683471138605126,0.228778173206523,0.169978429993855,0.69975726161829,0.690999869022119,11.4560474161814,0.316335993581135,0.406638934253697,0.756037385752609,1.04544148007234,0.43672512749235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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1746 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:174436982..174436991,+ | |||
|description=CAGE_peak_at_chr1:174436982..174436991,+ | |||
|id=chr1:174436982..174436991,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,1.74e-10,9;CL:0000349,4.45e-08,3;CL:0000351,4.45e-08,3;CL:0000068,1.51e-07,3;CL:0002202,1.51e-07,3;CL:0000069,1.51e-07,3;CL:0002632,1.51e-07,3;CL:0002368,1.51e-07,3;CL:0000307,1.51e-07,3;CL:0000377,1.51e-07,3;CL:0002494,3.30e-07,3;CL:0000737,3.30e-07,3;CL:0000746,3.30e-07,3;CL:0000513,3.30e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005178!5.58e-08!17;UBERON:0005181!5.58e-08!17;UBERON:0002224!5.58e-08!17;UBERON:0000915!5.58e-08!17;UBERON:0008947!5.58e-08!17;UBERON:0003258!5.58e-08!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,1.74e-10,9;UBERON:0005178,1.64e-08,17;UBERON:0005181,1.64e-08,17;UBERON:0002224,1.64e-08,17;UBERON:0000915,1.64e-08,17;UBERON:0008947,1.64e-08,17;UBERON:0003258,1.64e-08,17;UBERON:0000010,2.20e-08,11;UBERON:0000358,4.45e-08,3;UBERON:0000307,4.45e-08,3;UBERON:0007010,4.45e-08,3;UBERON:0003126,1.51e-07,3;UBERON:0001005,1.51e-07,3;UBERON:0007196,1.51e-07,3;UBERON:0001558,1.51e-07,3;UBERON:0000013,7.77e-07,3 | |||
|phase1_expression=0,0,0.454999239389536,0,0,0.16787927191189,0,0.258246646883153,0.140788722151667,0,0,0.239316476986009,0,0,0.666219523631325,0,0,0.157731082679119,0,0,0.340173160604279,0.0992909512008853,0.783599367416806,0.47997726838022,0.68822784320151,0,0,0.430942465371778,0,0,0,0.635030673459631,0.61506478758457,0,0,0.664938581433969,0,0.418531630736908,0,0,0.588231488031014,0,0.485510353031154,0,0.101376931219515,0.367093504323363,0.782391344348039,0.65407546914134,0.439372365468944,0.194429899074283,0.55994568650145,1.43752564364972,0.167782606057736,0.725362142011344,1.00828139742739,3.08711323243136,2.29226751951005,1.54701627683233,0,0,0,1.35537812827653,0,0.449949858640699,0.988866362566974,0.7104801149461,0.898800331555214,1.92109152660777,0,0,0.630974884054146,0.571301968807607,0.441737081903227,0.244981598429908,0.287536413054709,0,0,0,0.153606533256243,0,0.0914876436024097,0,0,0.56276261003168,0,0,0.142371680799103,0.186399445825301,0.227178579999552,0.302286240427142,0.579728977403356,0,0,0,0,0,0.140444420131752,0.340860645156116,0.779358013808606,3.18005617059306,0,0,0,0,2.38140145112336,2.28023878927589,3.53867111510348,0.22836775943812,0.258937883647172,0.742210695324124,0,0.304465478312141,0.230615497256059,0.904335843315735,0.705532242814229,0,0.494389935468748,0,0.884610551949874,1.29413479957927,1.10420759230197,0.969750506270444,0,0,0,0.255457055208591,1.31796636956512,0.599902730993408,0.381210681219194,0,0,0,0,0,0.20778804455956,0,0.101839363850316,0.746441823660558,0.505445516867349,0.210441855886474,0.520481771850815,0,0,0.150704817835715,0.0680364991513279,0.512454881139399,0.468508622798644,0,0,0.189106080167819,0,0,0.556094498451196,0.696504333044333,0.411564272815887,0.199034266818493,0,0.51469581422943,0.852490498186778,1.03562886267751,0.469052119962192,0.36012412292203,0.23674473558521,0.196764231747404,0,0.232533944750408,0,0.350296027101508,0.493679549740441,0.492502392237286,0.243206428637567,0.292399974850665,0,0.268412837520744,0,0,0.660837565967596,0,0.213288250535234,0.464473343720877,0.128867461322093,1.00841762311671,0.22237804384487,0.190225626112559,3.79623249235609,0.658795818896044,1.25667604400135,0.397912944082302,0.38992817423824,0.898819408654221,2.80979464837102,0.398282546508734,0.189667900953082,0.342745537829186,0,0,0.581857461502877,0.911765658574141,0.379419222745544,0.295220295959204,0.31399745568275,0.123397163921801,0,0.333690211432188,0.589676985339609,0,0.202860121388503,0.72353147925725,0.50925170356284,0,2.10775794807546,0.823684239564244,4.31304619582064,0.372140947668503,0,0,0,0.482443521363367,0.739012760666419,0.37898282354097,0.488894929326078,0.678980343100753,0.704070744865506,1.00503754465089,0.476087281772027,2.34160377429359,0.630540576424764,1.55025282754142,0.956728611944923,1.14704320301017,1.55416483679306,2.31438493730419,3.01582567878545,2.71952841909355,0,0,0,0,0.163934945376675,0.252470927204373,0.94652465824877,0.780877488593277,2.36965737506079,1.91175038362042,1.55959071857676,1.13230612315533,2.02405350837447,2.33804686329049,1.18586333383957,0,0.425820255624806,0.35613120733451,0.325773918707152,0,0,0.242780636154981,0.302323556964751,0.188605079755898,0,0,0,0.363533729477506,0,0.316036757935816,0,0,0,0,0.258717367565509,0,0.177340233642274,0.178368817602071,0.329098041204242,0.304464949114599,0.938686832254841,0.847328283455281,0.220528398054962,0.32977250588296,1.45317984026315,0.301564624640779,0.716234064018819,0,1.45740418314925,0,0.683483523191411,0.619160603889667,0.555583582109135,0,0.683471138605126,0.228778173206523,0.169978429993855,0.69975726161829,0.690999869022119,11.4560474161814,0.316335993581135,0.406638934253697,0.756037385752609,1.04544148007234,0.436725127492355,0.809186078308924,0.826534557253359,0.523511883968059,0.129614973291793,0,0,0.299033092087958,0.330916980914195,0.388902376688095,0.129159823477731,0.168956125490778,0.117357238645754,0.13020438484395,0.209718688851422,0,0.288030006257865,0,0.202725215290164,0.616265742988964,0.25984164595559,0.358053391334963,0.39736270956253,0.240390899039938,0.295379054349154,0.201932899896295,0.304827226619999,0.302478555410522,0.0974578807397524,0.0962118416403295,0.116876902181569,0.453460767230423,3.7737612073591,3.3194126945506,6.54750003819906,0.19318959403219,0.563047426353546,1.09890974560359,0.857473516316263,0,0,0,0,0.343706364687375,0,0,0,0,0,0,0,0,0,0.729320151204882,0,0.367687016900028,0,0,0,0,0,0.565879024158229,0.0936415074698824,0.0640251524048693,0.17230640686684,0,0,0,0.412085900803307,0.588795680537589,0.342869252385415,0,0,0,0.0941093804153306,0.169229215783353,0.365855945745545,0.263069711437843,0.135804113845862,0.561142271657738,0.118635018124174,0.197008964751127,0.409231043169689,0.154936841185966,0,0.249810577937946,0.233931608445408,0.214871054048298,0.956441660344217,0.441182838239031,0.231867835620421 | |||
|short_description=p@chr1:174436982..174436991,+ | |||
}} |
Latest revision as of 07:51, 5 August 2015
Short description: | p@chr1:174436982..174436991, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:174436982..174436991, + |
Coexpression cluster: | MCL_coexpression_mm9:1746 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 1.74e-10 | 9 |
extraembryonic cell | 4.45e-08 | 3 |
trophoblast cell | 4.45e-08 | 3 |
duct epithelial cell | 1.51e-07 | 3 |
epithelial cell of tracheobronchial tree | 1.51e-07 | 3 |
branched duct epithelial cell | 1.51e-07 | 3 |
epithelial cell of lower respiratory tract | 1.51e-07 | 3 |
respiratory epithelial cell | 1.51e-07 | 3 |
tracheal epithelial cell | 1.51e-07 | 3 |
tracheoblast | 1.51e-07 | 3 |
cardiocyte | 3.30e-07 | 3 |
striated muscle cell | 3.30e-07 | 3 |
cardiac muscle cell | 3.30e-07 | 3 |
cardiac muscle myoblast | 3.30e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 1.74e-10 | 9 |
thoracic cavity element | 1.64e-08 | 17 |
thoracic segment organ | 1.64e-08 | 17 |
thoracic cavity | 1.64e-08 | 17 |
thoracic segment of trunk | 1.64e-08 | 17 |
respiratory primordium | 1.64e-08 | 17 |
endoderm of foregut | 1.64e-08 | 17 |
peripheral nervous system | 2.20e-08 | 11 |
blastocyst | 4.45e-08 | 3 |
blastula | 4.45e-08 | 3 |
cleaving embryo | 4.45e-08 | 3 |
trachea | 1.51e-07 | 3 |
respiratory airway | 1.51e-07 | 3 |
tracheobronchial tree | 1.51e-07 | 3 |
lower respiratory tract | 1.51e-07 | 3 |
sympathetic nervous system | 7.77e-07 | 3 |