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DOID:0050687

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Name:cell type cancer
Namespace:FANTOM
Definition:"A cancer that is classified by the type of cell from which it is derived." [url:http://cancerguide.org/basic.html, url:http://en.wikipedia.org/wiki/Cancer]
Created by:snadendla
Creation date:2011-06-13T03:28:50Z

Ontology association
Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.

link to ontology dataset
data


Parents

is_a:DOID:162(cancer)



Children


is a:DOID:1115 (sarcoma),DOID:154 (mixed cell type cancer),DOID:1909 (melanoma),DOID:2994 (germ cell cancer),DOID:305 (carcinoma),DOID:3070 (malignant glioma),DOID:3350 (mesenchymal cell neoplasm)


Ontology Tree: Loaded from BioPortal

FF samples

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:0050687 (cell type cancer), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
7.3e-52FFCP PHASE1:Hg19::chr9:97317348..97317379,+#_5476a99a4e92b3b9316ca013ad512187p1@uc004aus.1
7.3e-52FFCP PHASE2:Hg19::chr9:97317348..97317379,+#_5476a99a4e92b3b9316ca013ad512187p1@uc004aus.1
1.13e-48FFCP PHASE1:Hg19::chr7:156803329..156803362,-#_6c1bb7a6cf1312b0bcd487a9f91851b4p1@MNX1
1.13e-48FFCP PHASE2:Hg19::chr7:156803329..156803362,-#_6c1bb7a6cf1312b0bcd487a9f91851b4p1@MNX1
2.83e-48FFCP PHASE2:Hg19::chrX:153991088..153991168,+#_517cc3607d1ab1f7a8acfdf86512216fp1@DKC1
2.83e-48FFCP PHASE1:Hg19::chrX:153991088..153991168,+#_517cc3607d1ab1f7a8acfdf86512216fp1@DKC1
1.03e-46FFCP PHASE2:Hg19::chr12:20975472..20975489,+#_00e6f627fb3ec852eabd73be89c7ca29p@chr12:20975472..20975489, +
1.03e-46FFCP PHASE1:Hg19::chr12:20975472..20975489,+#_00e6f627fb3ec852eabd73be89c7ca29p@chr12:20975472..20975489, +
5.89e-46FFCP PHASE1:Hg19::chr20:57617831..57617909,-#_65f7279e60545754a324acde930dfe78p1@SLMO2
5.89e-46FFCP PHASE2:Hg19::chr20:57617831..57617909,-#_65f7279e60545754a324acde930dfe78p1@SLMO2
7.24e-46FFCP PHASE1:Hg19::chr7:1595871..1595896,-#_ee1f3964d0e3838cc1462a94e118c677p5@TMEM184A
7.24e-46FFCP PHASE2:Hg19::chr7:1595871..1595896,-#_ee1f3964d0e3838cc1462a94e118c677p5@TMEM184A
2.27e-45FFCP PHASE1:Hg19::chr8:120221345..120221393,+#_3d8132f22613bd0605544cd814d673bdp3@MAL2
2.27e-45FFCP PHASE2:Hg19::chr8:120221345..120221393,+#_3d8132f22613bd0605544cd814d673bdp3@MAL2
2.41e-45FFCP PHASE2:Hg19::chr11:1372935..1372952,+#_98f13140051ce854c8ac673ac299e9e3p@chr11:1372935..1372952, +
2.41e-45FFCP PHASE1:Hg19::chr11:1372935..1372952,+#_98f13140051ce854c8ac673ac299e9e3p@chr11:1372935..1372952, +
4.37e-45FFCP PHASE2:Hg19::chr3:180707436..180707451,-#_b19caebb5779f3793d0a43d63d5f97a7p2@DNAJC19
4.37e-45FFCP PHASE1:Hg19::chr3:180707436..180707451,-#_b19caebb5779f3793d0a43d63d5f97a7p2@DNAJC19
4.42e-45FFCP PHASE2:Hg19::chr3:172468505..172468582,+#_9662599a95471f6b573e63dcf691b7e0p1@ECT2
4.42e-45FFCP PHASE1:Hg19::chr3:172468505..172468582,+#_9662599a95471f6b573e63dcf691b7e0p1@ECT2
1.49e-44FFCP PHASE2:Hg19::chr15:56311466..56311511,+#_bdac417d2e3ac6bdf9d1cc3d43d4a5afp@chr15:56311466..56311511, +
1.49e-44FFCP PHASE1:Hg19::chr15:56311466..56311511,+#_bdac417d2e3ac6bdf9d1cc3d43d4a5afp@chr15:56311466..56311511, +
4.62e-44FFCP PHASE2:Hg19::chr12:20975516..20975562,+#_01c9631b772310c13886bcee2aaed2cep@chr12:20975516..20975562, +
4.62e-44FFCP PHASE1:Hg19::chr12:20975516..20975562,+#_01c9631b772310c13886bcee2aaed2cep@chr12:20975516..20975562, +
6.56e-42FFCP PHASE1:Hg19::chr15:78857870..78857897,+#_a884691d1058034c9cef3ce3e8473efbp1@CHRNA5
6.56e-42FFCP PHASE2:Hg19::chr15:78857870..78857897,+#_a884691d1058034c9cef3ce3e8473efbp1@CHRNA5
8.07e-42FFCP PHASE2:Hg19::chr7:96339167..96339197,-#_e6c57b5c5de9bb75947959265edc20fep2@SHFM1
8.07e-42FFCP PHASE1:Hg19::chr7:96339167..96339197,-#_e6c57b5c5de9bb75947959265edc20fep2@SHFM1
3.24e-41FFCP PHASE2:Hg19::chr1:154947148..154947175,+#_a9314f843ac941287985ff615e44b11ep1@CKS1B
3.24e-41FFCP PHASE1:Hg19::chr1:154947148..154947175,+#_a9314f843ac941287985ff615e44b11ep1@CKS1B
3.96e-41FFCP PHASE2:Hg19::chr5:34915805..34915847,+#_633a383f8705556aec1190ddd5bfb71dp1@BRIX1
3.96e-41FFCP PHASE1:Hg19::chr5:34915805..34915847,+#_633a383f8705556aec1190ddd5bfb71dp1@BRIX1
5.77e-41FFCP PHASE2:Hg19::chr17:36715685..36715749,-#_340e2e2094cbd602ba81d5b0182000bep3@SRCIN1
5.77e-41FFCP PHASE1:Hg19::chr17:36715685..36715749,-#_340e2e2094cbd602ba81d5b0182000bep3@SRCIN1
6.49e-41FFCP PHASE1:Hg19::chr7:105162652..105162709,-#_b5bf1ff3bc5994fb40ad509d3589db1ep1@PUS7
6.49e-41FFCP PHASE2:Hg19::chr7:105162652..105162709,-#_b5bf1ff3bc5994fb40ad509d3589db1ep1@PUS7
7.02e-41FFCP PHASE1:Hg19::chr2:54784868..54784919,+#_589ff22ede124956f3a7e112110534f3p@chr2:54784868..54784919, +
7.02e-41FFCP PHASE2:Hg19::chr2:54784868..54784919,+#_589ff22ede124956f3a7e112110534f3p@chr2:54784868..54784919, +
9.49e-41FFCP PHASE2:Hg19::chr2:238499725..238499747,-#_7a86feab6ec92a5007d5a1e4afaac56dp2@RAB17
9.49e-41FFCP PHASE1:Hg19::chr2:238499725..238499747,-#_7a86feab6ec92a5007d5a1e4afaac56dp2@RAB17
9.52e-41FFCP PHASE2:Hg19::chr13:109917833..109917866,+#_4f50b545d639545810a881464f1ec4c1p@chr13:109917833..109917866, +
9.52e-41FFCP PHASE1:Hg19::chr13:109917833..109917866,+#_4f50b545d639545810a881464f1ec4c1p@chr13:109917833..109917866, +
1.46e-40FFCP PHASE1:Hg19::chr8:124408630..124408647,-#_d0662a96d16202cb205a3ffff225c39ep2@ATAD2
1.46e-40FFCP PHASE2:Hg19::chr8:124408630..124408647,-#_d0662a96d16202cb205a3ffff225c39ep2@ATAD2
2.64e-40FFCP PHASE2:Hg19::chr4:57301645..57301675,-#_6e8e14de91aa3fd45dfd2b5d0c66ccb6p2@PPAT
2.64e-40FFCP PHASE1:Hg19::chr4:57301645..57301675,-#_6e8e14de91aa3fd45dfd2b5d0c66ccb6p2@PPAT
3.66e-40FFCP PHASE2:Hg19::chr5:37288836..37288849,-#_b2e8d775e4c6a1bb8f601a006fbe4f44p@chr5:37288836..37288849, -
3.66e-40FFCP PHASE1:Hg19::chr5:37288836..37288849,-#_b2e8d775e4c6a1bb8f601a006fbe4f44p@chr5:37288836..37288849, -
4.73e-40FFCP PHASE1:Hg19::chr22:22901636..22901715,-#_4dfe7d5511b645658a9e013c277138a9p1@PRAME
4.73e-40FFCP PHASE2:Hg19::chr22:22901636..22901715,-#_4dfe7d5511b645658a9e013c277138a9p1@PRAME
2.42e-39FFCP PHASE1:Hg19::chr15:69706740..69706754,+#_62031ce299723f757990be2bba890781p2@KIF23
2.42e-39FFCP PHASE2:Hg19::chr15:69706740..69706754,+#_62031ce299723f757990be2bba890781p2@KIF23
3.02e-39FFCP PHASE2:Hg19::chr7:11012953..11012969,+#_fd93e9825283cff3486fb8bc31274a63p@chr7:11012953..11012969, +
3.02e-39FFCP PHASE1:Hg19::chr7:11012953..11012969,+#_fd93e9825283cff3486fb8bc31274a63p@chr7:11012953..11012969, +
4.22e-39FFCP PHASE2:Hg19::chr5:37371163..37371231,-#_e87a340889538ac078ecac4b948756c4p1@NUP155
4.22e-39FFCP PHASE1:Hg19::chr5:37371163..37371231,-#_e87a340889538ac078ecac4b948756c4p1@NUP155
1.38e-38FFCP PHASE1:Hg19::chr7:56119449..56119492,+#_fc8c8b4bf62e8ccb6ad37deaf7ecad7ep1@CCT6A
1.38e-38FFCP PHASE2:Hg19::chr7:56119449..56119492,+#_fc8c8b4bf62e8ccb6ad37deaf7ecad7ep1@CCT6A
2.18e-38FFCP PHASE2:Hg19::chr17:38444115..38444194,+#_9263696c162d2231d123ddf9e9b18e19p1@CDC6
2.18e-38FFCP PHASE1:Hg19::chr17:38444115..38444194,+#_9263696c162d2231d123ddf9e9b18e19p1@CDC6
2.62e-38FFCP PHASE1:Hg19::chr7:1595831..1595858,-#_accb131c388a198f6c1ddbb4d5da638ap1@TMEM184A
2.62e-38FFCP PHASE2:Hg19::chr7:1595831..1595858,-#_accb131c388a198f6c1ddbb4d5da638ap1@TMEM184A
3.07e-38FFCP PHASE1:Hg19::chr17:62770351..62770363,-#_9e9b4deaf39a73b8d75223f7f44db7afp@chr17:62770351..62770363, -
3.07e-38FFCP PHASE2:Hg19::chr17:62770351..62770363,-#_9e9b4deaf39a73b8d75223f7f44db7afp@chr17:62770351..62770363, -
3.5e-38FFCP PHASE1:Hg19::chr2:70529150..70529179,-#_6b74e324c526b09133f3f2f842dc0905p1@FAM136A
3.5e-38FFCP PHASE2:Hg19::chr2:70529150..70529179,-#_6b74e324c526b09133f3f2f842dc0905p1@FAM136A
4.66e-38FFCP PHASE1:Hg19::chr12:50419141..50419170,-#_97931646101a64e4267a13fcd025e0efp2@RACGAP1
4.66e-38FFCP PHASE2:Hg19::chr12:54332608..54332636,+#_97931646101a64e4267a13fcd025e0efp1@HOXC13
4.66e-38FFCP PHASE2:Hg19::chr12:50419141..50419170,-#_97931646101a64e4267a13fcd025e0efp2@RACGAP1
4.66e-38FFCP PHASE1:Hg19::chr12:54332608..54332636,+#_97931646101a64e4267a13fcd025e0efp1@HOXC13
5.57e-38FFCP PHASE1:Hg19::chr12:118454500..118454585,+#_13d0f01f4c999c4a5f2364616fcd07d2p1@RFC5
5.57e-38FFCP PHASE2:Hg19::chr12:118454500..118454585,+#_13d0f01f4c999c4a5f2364616fcd07d2p1@RFC5
6.1e-38FFCP PHASE2:Hg19::chrX:27417088..27417131,-#_6de9539b6a44349d8d317ad1550a606ap1@ENST00000422048, p1@uc004dbt.2
6.1e-38FFCP PHASE1:Hg19::chrX:27417088..27417131,-#_6de9539b6a44349d8d317ad1550a606ap1@ENST00000422048, p1@uc004dbt.2
9.54e-38FFCP PHASE2:Hg19::chr11:66139128..66139152,-#_faee880c7e3dafefc5d2426004c8bda2p3@SLC29A2
9.54e-38FFCP PHASE1:Hg19::chr11:66139128..66139152,-#_faee880c7e3dafefc5d2426004c8bda2p3@SLC29A2
1.24e-37FFCP PHASE2:Hg19::chr2:198364552..198364576,-#_6f3958d46c2b8d00d02c43c18629dc16p1@HSPD1
1.24e-37FFCP PHASE1:Hg19::chr2:198364552..198364576,-#_6f3958d46c2b8d00d02c43c18629dc16p1@HSPD1
1.55e-37FFCP PHASE1:Hg19::chr2:174562443..174562467,+#_a67790d25df75c3fae09a7ab3afc5c68p@chr2:174562443..174562467, +
1.55e-37FFCP PHASE2:Hg19::chr2:174562443..174562467,+#_a67790d25df75c3fae09a7ab3afc5c68p@chr2:174562443..174562467, +
2.03e-37FFCP PHASE2:Hg19::chr2:29117521..29117569,+#_febc5301ad9d7acfac801688a82ea647p1@WDR43
2.03e-37FFCP PHASE1:Hg19::chr2:29117521..29117569,+#_febc5301ad9d7acfac801688a82ea647p1@WDR43
2.33e-37FFCP PHASE2:Hg19::chr17:43503012..43503035,-#_82c0944f083c2e52120ebdb31e2c3260p4@ARHGAP27
2.33e-37FFCP PHASE1:Hg19::chr17:43503012..43503035,-#_82c0944f083c2e52120ebdb31e2c3260p4@ARHGAP27
2.57e-37FFCP PHASE1:Hg19::chr16:2955389..2955405,-#_616eadb0cd1164efd51f9947857688f1p@chr16:2955389..2955405, -
2.57e-37FFCP PHASE2:Hg19::chr16:2955389..2955405,-#_616eadb0cd1164efd51f9947857688f1p@chr16:2955389..2955405, -
3.09e-37FFCP PHASE2:Hg19::chr1:235268802..235268805,-#_be58c527b0fde018746d6447849972dep@chr1:235268802..235268805, -
3.09e-37FFCP PHASE1:Hg19::chr1:235268802..235268805,-#_be58c527b0fde018746d6447849972dep@chr1:235268802..235268805, -
4.54e-37FFCP PHASE1:Hg19::chr5:10250349..10250362,+#_2d8ec77f3e3b38a639bb60ed5abb7351p2@CCT5
4.54e-37FFCP PHASE2:Hg19::chr5:10250349..10250362,+#_2d8ec77f3e3b38a639bb60ed5abb7351p2@CCT5
5.03e-37FFCP PHASE2:Hg19::chr3:194040598..194040638,-#_a712dcc4ebc6ef017cd020b53657a059p@chr3:194040598..194040638, -
5.03e-37FFCP PHASE1:Hg19::chr3:194040598..194040638,-#_a712dcc4ebc6ef017cd020b53657a059p@chr3:194040598..194040638, -
8.27e-37FFCP PHASE2:Hg19::chr7:1595804..1595828,-#_f2fda5d569a0d61899984d16d3745198p3@TMEM184A
8.27e-37FFCP PHASE1:Hg19::chr7:1595804..1595828,-#_f2fda5d569a0d61899984d16d3745198p3@TMEM184A
1.08e-36FFCP PHASE2:Hg19::chr10:96363899..96363904,+#_2f4812cba8b76987d543a2adf63419f1p@chr10:96363899..96363904, +
1.08e-36FFCP PHASE1:Hg19::chr10:96363899..96363904,+#_2f4812cba8b76987d543a2adf63419f1p@chr10:96363899..96363904, +
1.73e-36FFCP PHASE1:Hg19::chr18:47376197..47376227,-#_8552cdedfcfc121adb8a183e8f88e8cep2@MYO5B
1.73e-36FFCP PHASE2:Hg19::chr18:47376197..47376227,-#_8552cdedfcfc121adb8a183e8f88e8cep2@MYO5B
1.81e-36FFCP PHASE1:Hg19::chr13:114103443..114103479,-#_43a101d9ebdcc8ce216dbdbec85d4c98p2@ADPRHL1
1.81e-36FFCP PHASE2:Hg19::chr13:114103443..114103479,-#_43a101d9ebdcc8ce216dbdbec85d4c98p2@ADPRHL1