FFCP PHASE1:Hg19::chr11:106856838..106856859,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:106856838..106856859,- | |||
|description=CAGE_peak_at_chr11:106856838..106856859,- | |description=CAGE_peak_at_chr11:106856838..106856859,- | ||
|id=chr11:106856838..106856859,- | |id=chr11:106856838..106856859,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006238;2.27e-10;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!3.94e-37!22;UBERON:0001869!1.29e-35!32;UBERON:0001893!2.67e-33!34;UBERON:0000956!2.20e-32!25;UBERON:0000203!2.20e-32!25;UBERON:0001950!4.86e-31!20;UBERON:0002791!1.45e-30!33;UBERON:0001049!1.86e-30!57;UBERON:0005068!1.86e-30!57;UBERON:0006241!1.86e-30!57;UBERON:0007135!1.86e-30!57;UBERON:0002780!6.41e-30!41;UBERON:0001890!6.41e-30!41;UBERON:0006240!6.41e-30!41;UBERON:0002020!1.46e-29!34;UBERON:0003528!1.46e-29!34;UBERON:0001017!1.86e-29!82;UBERON:0003080!4.19e-29!42;UBERON:0000955!2.98e-28!69;UBERON:0006238!2.98e-28!69;UBERON:0005743!8.81e-28!86;UBERON:0000073!1.60e-24!94;UBERON:0001016!1.60e-24!94;UBERON:0002616!5.40e-24!59;UBERON:0003075!5.34e-22!86;UBERON:0007284!5.34e-22!86;UBERON:0001871!9.49e-22!7;UBERON:0007023!5.39e-21!115;UBERON:0003056!9.39e-21!61;UBERON:0002346!9.64e-21!90;UBERON:0000349!8.92e-19!5;UBERON:0000200!2.39e-15!6;UBERON:0000153!1.35e-13!129;UBERON:0007811!1.35e-13!129;UBERON:0000033!3.06e-13!123;UBERON:0004121!8.84e-13!169;UBERON:0000924!2.54e-12!173;UBERON:0006601!2.54e-12!173;UBERON:0002771!1.68e-11!3;UBERON:0000025!1.39e-10!194;UBERON:0000475!2.25e-09!365;UBERON:0000483!7.33e-09!309;UBERON:0000119!1.08e-08!312;UBERON:0001876!1.34e-08!2;UBERON:0001954!1.61e-08!2;UBERON:0003022!1.61e-08!2;UBERON:0002421!1.61e-08!2;UBERON:0002600!1.61e-08!2;UBERON:0004111!3.71e-07!241;UBERON:0001872!3.79e-07!5;UBERON:0002420!8.93e-07!9;UBERON:0007245!8.93e-07!9;UBERON:0010009!8.93e-07!9;UBERON:0010011!8.93e-07!9;UBERON:0000454!8.93e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000988;5.04e-34;3!UBERON:0002298;8.34e-18;6!UBERON:0002680;2.31e-12;9!UBERON:0001895;2.31e-12;9!UBERON:0004733;1.27e-09;12!UBERON:0002028;1.27e-09;12!UBERON:0004732;5.49e-09;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000988,5.96e-34,3;UBERON:0002298,9.07e-18,6;UBERON:0002680,2.45e-12,9;UBERON:0001895,2.45e-12,9;UBERON:0010092,2.45e-12,9;UBERON:0004733,1.33e-09,12;UBERON:0002028,1.33e-09,12;UBERON:0007277,1.33e-09,12;UBERON:0004732,5.70e-09,13;UBERON:0003076,5.93e-08,15;UBERON:0003057,5.93e-08,15;UBERON:0000955,6.59e-07,68;UBERON:0006238,6.59e-07,68 | |||
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| ||
|short_description=p@chr11:106856838..106856859,- | |short_description=p@chr11:106856838..106856859,- | ||
}} | }} |
Latest revision as of 17:46, 23 July 2015
Short description: | p@chr11:106856838..106856859, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:106856838..106856859, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pons | 5.96e-34 | 3 |
brainstem | 9.07e-18 | 6 |
regional part of metencephalon | 2.45e-12 | 9 |
metencephalon | 2.45e-12 | 9 |
future metencephalon | 2.45e-12 | 9 |
segmental subdivision of hindbrain | 1.33e-09 | 12 |
hindbrain | 1.33e-09 | 12 |
presumptive hindbrain | 1.33e-09 | 12 |
segmental subdivision of nervous system | 5.70e-09 | 13 |
posterior neural tube | 5.93e-08 | 15 |
chordal neural plate | 5.93e-08 | 15 |
brain | 6.59e-07 | 68 |
future brain | 6.59e-07 | 68 |