FFCP PHASE1:Hg19::chr19:12936544..12936548,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:12936544..12936548,+
|short_description=p1@CU674986
|description=CAGE_peak_1_at_CU674986_5end
|association_with_transcript=23bp_to_CU674986_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=23bp_to_CU674986_5end | |||
|cluster_id=chr19:12936544..12936548,+ | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_1_at_CU674986_5end | |||
|id=chr19:12936544..12936548,+ | |||
|ontology_enrichment_celltype=CL:0000039!3.58e-14!7;CL:0000586!3.58e-14!7;CL:0002322!2.03e-11!5 | |||
|ontology_enrichment_celltype_v019=CL:0002322;6.20e-38;5!CL:0000540;1.50e-31;6!CL:0000404;1.50e-31;6!CL:0000511;6.82e-13;1!CL:0002625;6.82e-13;1!CL:0000216;6.82e-13;1!CL:0002321;7.13e-13;15!CL:0002319;8.40e-11;25!CL:0000039;1.57e-07;7!CL:0000586;1.57e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,7.16e-38,5;CL:0000540,1.34e-31,6;CL:0000031,1.34e-31,6;CL:0000404,1.34e-31,6;CL:0000047,8.40e-24,8;CL:0000511,5.38e-13,1;CL:0002625,5.38e-13,1;CL:0000216,5.38e-13,1;CL:0002319,7.49e-11,25;CL:0000133,7.31e-09,59;CL:0000039,1.63e-07,7;CL:0000586,1.63e-07,7;CL:0000221,3.44e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000031;1.50e-31;6 | |||
|ontology_enrichment_disease=DOID:3095!6.06e-13!22;DOID:2994!6.06e-13!22;DOID:0050687!6.70e-09!143;DOID:162!9.47e-08!235;DOID:14566!2.42e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.03e-08;22!DOID:2994;1.03e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.13e-08,22;DOID:2994,1.13e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!4.51e-12!8;UBERON:0000991!4.52e-11!21;UBERON:0009196!4.52e-11!21;UBERON:0009117!4.52e-11!21;UBERON:0005564!4.52e-11!21;UBERON:0004176!1.98e-10!22;UBERON:0003135!2.07e-08!11;UBERON:0004458!3.54e-07!49;UBERON:0002323!6.13e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;6.82e-13;1!UBERON:0001343;6.82e-13;1!UBERON:0004910;6.82e-13;1!UBERON:0004813;6.82e-13;1!UBERON:0004909;4.42e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,5.38e-13,1;UBERON:0001343,5.38e-13,1;UBERON:0004910,5.38e-13,1;UBERON:0005154,5.38e-13,1;UBERON:0005295,5.38e-13,1;UBERON:0004813,5.38e-13,1;UBERON:0005297,5.38e-13,1;UBERON:0005294,5.38e-13,1;UBERON:0010141,5.38e-13,1;UBERON:0005891,5.38e-13,1;UBERON:0004909,3.93e-07,2 | |||
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| ||
|short_description=p1@CU674986 | |||
}} | }} |
Latest revision as of 03:50, 26 July 2015
Short description: | p1@CU674986 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CU674986_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | 23bp_to_CU674986_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 7.16e-38 | 5 |
neuron | 1.34e-31 | 6 |
neuroblast | 1.34e-31 | 6 |
electrically signaling cell | 1.34e-31 | 6 |
neuronal stem cell | 8.40e-24 | 8 |
androgen binding protein secreting cell | 5.38e-13 | 1 |
seminiferous tubule epithelial cell | 5.38e-13 | 1 |
Sertoli cell | 5.38e-13 | 1 |
neural cell | 7.49e-11 | 25 |
neurectodermal cell | 7.31e-09 | 59 |
germ line cell | 1.63e-07 | 7 |
germ cell | 1.63e-07 | 7 |
ectodermal cell | 3.44e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 5.38e-13 | 1 |
seminiferous tubule of testis | 5.38e-13 | 1 |
epithelium of male gonad | 5.38e-13 | 1 |
epithelial cord | 5.38e-13 | 1 |
sex cord | 5.38e-13 | 1 |
seminiferous tubule epithelium | 5.38e-13 | 1 |
testis sex cord | 5.38e-13 | 1 |
genital ridge | 5.38e-13 | 1 |
primitive sex cord of indifferent gonad | 5.38e-13 | 1 |
coelomic epithelium | 5.38e-13 | 1 |
epithelium of gonad | 3.93e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.13e-08 | 22 |
germ cell cancer | 1.13e-08 | 22 |