FFCP PHASE1:Hg19::chr16:81272287..81272303,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=53630 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13815 | |||
|TSSclassifier=strong | |||
|UniProt=E7EM88,Q9HAY6 | |||
|association_with_transcript=0bp_to_ENST00000425577,NM_017429,uc002fgm.1,uc002fgn.1,uc010vnp.1_5end | |||
|cluster_id=chr16:81272287..81272303,+ | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_1_at_BCMO1_5end | |||
|id=chr16:81272287..81272303,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:1000497;7.95e-09;17!CL:0002518;7.95e-09;17!CL:1000507;4.94e-07;10!CL:1000494;4.94e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,8.07e-09,17;CL:0002518,8.07e-09,17;CL:1000507,4.99e-07,10;CL:1000494,4.99e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0003918;2.97e-11;10!UBERON:0007687;2.97e-11;10!UBERON:0003056;2.89e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4468;2.12e-10;2!DOID:299;3.82e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,1.84e-10,2;DOID:299,3.95e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0005743!1.65e-17!86;UBERON:0000073!7.89e-15!94;UBERON:0001016!7.89e-15!94;UBERON:0001017!4.03e-14!82;UBERON:0000481!8.09e-14!347;UBERON:0003075!2.32e-13!86;UBERON:0007284!2.32e-13!86;UBERON:0007023!7.23e-13!115;UBERON:0005172!2.32e-12!55;UBERON:0005173!2.32e-12!55;UBERON:0002346!2.42e-12!90;UBERON:0000955!1.14e-11!69;UBERON:0006238!1.14e-11!69;UBERON:0000489!6.98e-11!32;UBERON:0002113!8.63e-11!27;UBERON:0003918!8.63e-11!27;UBERON:0005095!8.63e-11!27;UBERON:0007687!8.63e-11!27;UBERON:0005177!1.68e-10!107;UBERON:0002417!1.89e-10!61;UBERON:0000916!1.89e-10!61;UBERON:0000475!1.97e-10!365;UBERON:0001049!6.07e-10!57;UBERON:0005068!6.07e-10!57;UBERON:0006241!6.07e-10!57;UBERON:0007135!6.07e-10!57;UBERON:0003056!6.43e-10!61;UBERON:0006554!1.12e-09!44;UBERON:0000062!1.56e-09!511;UBERON:0002616!1.71e-09!59;UBERON:0000153!1.87e-09!129;UBERON:0007811!1.87e-09!129;UBERON:0001008!2.41e-09!45;UBERON:0000033!4.10e-09!123;UBERON:0000966!6.86e-09!5;UBERON:0005388!6.86e-09!5;UBERON:0001802!6.86e-09!5;UBERON:0000483!1.27e-08!309;UBERON:0000119!2.23e-08!312;UBERON:0000058!6.48e-08!26;UBERON:0004121!1.99e-07!169;UBERON:0004111!2.03e-07!241;UBERON:0000025!2.59e-07!194;UBERON:0000924!5.10e-07!173;UBERON:0006601!5.10e-07!173;UBERON:0000922!5.53e-07!612;UBERON:0000477!6.69e-07!286;UBERON:0009497!7.16e-07!25;UBERON:0000015!7.16e-07!25;UBERON:0002423!7.16e-07!25;UBERON:0006235!7.16e-07!25;UBERON:0004161!7.16e-07!25;UBERON:0004921!7.71e-07!129;UBERON:0004185!7.71e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;3.34e-11;4!UBERON:0010133;3.34e-11;4!UBERON:0001905;6.22e-11;2!UBERON:0002757;6.22e-11;2!UBERON:0010134;6.22e-11;2!UBERON:0005408;6.22e-11;2!UBERON:0001899;6.22e-11;2!UBERON:0002113;1.30e-10;24!UBERON:0011143;1.30e-10;24!UBERON:0005409;8.66e-09;22!UBERON:0000489;1.43e-08;29!UBERON:0005172;1.96e-08;52!UBERON:0005173;1.96e-08;52!UBERON:0006554;3.04e-08;30!UBERON:0001008;3.04e-08;30!UBERON:0001896;3.03e-07;3!UBERON:0005290;3.03e-07;3!UBERON:0004211;4.94e-07;10!UBERON:0009773;4.94e-07;10!UBERON:0001231;4.94e-07;10!UBERON:0004810;4.94e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,2.65e-12,26;UBERON:0003918,2.65e-12,26;UBERON:0011143,2.65e-12,26;UBERON:0005095,2.65e-12,26;UBERON:0007687,2.65e-12,26;UBERON:0003296,3.29e-11,4;UBERON:0010133,3.29e-11,4;UBERON:0005172,4.69e-11,54;UBERON:0005173,4.69e-11,54;UBERON:0001905,6.22e-11,2;UBERON:0002757,6.22e-11,2;UBERON:0010134,6.22e-11,2;UBERON:0005408,6.22e-11,2;UBERON:0001899,6.22e-11,2;UBERON:0000489,4.55e-10,31;UBERON:0002417,1.11e-09,60;UBERON:0000916,1.11e-09,60;UBERON:0005409,1.19e-07,25;UBERON:0006554,1.48e-07,47;UBERON:0001008,2.31e-07,48;UBERON:0001896,2.98e-07,3;UBERON:0005290,2.98e-07,3;UBERON:0010096,2.98e-07,3;UBERON:0004810,4.99e-07,10;UBERON:0006947,8.31e-07,3;UBERON:0004054,8.31e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.246242116153576,0,0.313454721478088,0.286235987131057,0.136874425072884,0,0.152826811495903,0,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0,0.263504357079378,1.24430121722827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605429710579726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0,0.116193942869518,0.414644220061482,0.252320850875628,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0.982827216677626,2.36315962672562,0,4.91953754172454,0.343135620597051,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32945394550784,0,0,0,0,0,0,0.15403067420883,2.35304930753057,1.46139224653261,0.316654886678627,0,0,0,0,0,1.00337954770971,1.78413391131527,0,0.447749509444357,0,0,0.256450125116389,0.984043937099117,0.325378394664303,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.55567026775618,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,5.2905877049398,1.84083628503879,0,0,0.179736702294654,0.895105873378046,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0.120596438625408,0,0,0,4.60709334023342,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,12.6598838716816,3.91758739581955,0.565412285735763,0,0,33.3485018177589,1.22206028986725,0,0,0,0.202203398942031,0,0,0,0,0,1.57833761139756,0,0,0.252746318513952,0.450970258243478,0,0,0,0,0,2.56148591426813,0,0,0,0,0.34945333648406,0,0,0,0,0.484945082442097,0,11.2990370390266,0,0,0,0.782205530939212,0,0.85381197895741,0,3.31407959454444,0,0,0,0,0.235694034616795,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0.0674035438541849,3.6418168160457,0,0.795229689809303,0.272406812223151,0.160753148465019,0,0,0,0,0,0,3.86147965766071,2.7800931711549,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05173127149315,0,0.387848869084652,0.26446520348538,5.30369197441421,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,8.027728739661,4.8808782676215,0.248385611765534,17.1552307320926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0.168942440653073,1.53744911152768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0,0,0,0,0,0.294443155503077,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,136.068266313085,165.115307609443,0,1.36597314810779,0,0.230467975111559,0,0,0.131545547125698,0.118193840883968,0.111231401892069,0.235479278551542,0.471346769748006,0,0,5.39818978046554,4.29976519098345,67.187951526057,3.79232668158544,0,0,0,0,0,0,0,0,0,2.9637093513365,0,0,0,28.9705568356282,0.196300467230486,0.853425474875886,0,0,0,0,0,0,0,0,0.439762066981716,0,17.0554889418558,0.437119121007915,0,0.245148321753905,0,0.196308467114945,0,0,0,0,0,0,0,0,0.160482733378337,1.46067277649303,0,0,0,0,0,2.645134202577,0,0,0,0,0,1.14028650910293,0,0,0,0,0,0,0,0.103432995861895,0,0,0.129177819672012,0.124149428591716,0,0,0,0.435433495793923,0,0,0.645499848534087,0,0.0814032686109745,0,0,3.50318288215689,0,0.488965776731466,0,0,0,0 | |||
|short_description=p1@BCMO1 | |||
}} |
Latest revision as of 00:49, 18 September 2015
Short description: | p1@BCMO1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BCMO1_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 0bp_to_ENST00000425577, NM_017429, uc002fgm.1, uc002fgn.1, uc010vnp.1_5end |
EntrezGene: | BCMO1 |
HGNC: | 13815 |
UniProt: | E7EM88Q9HAY6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 8.07e-09 | 17 |
kidney epithelial cell | 8.07e-09 | 17 |
kidney tubule cell | 4.99e-07 | 10 |
nephron tubule epithelial cell | 4.99e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
kidney | 2.65e-12 | 26 |
kidney mesenchyme | 2.65e-12 | 26 |
upper urinary tract | 2.65e-12 | 26 |
kidney rudiment | 2.65e-12 | 26 |
kidney field | 2.65e-12 | 26 |
gland of diencephalon | 3.29e-11 | 4 |
neuroendocrine gland | 3.29e-11 | 4 |
abdomen element | 4.69e-11 | 54 |
abdominal segment element | 4.69e-11 | 54 |
pineal body | 6.22e-11 | 2 |
regional part of epithalamus | 6.22e-11 | 2 |
secretory circumventricular organ | 6.22e-11 | 2 |
circumventricular organ | 6.22e-11 | 2 |
epithalamus | 6.22e-11 | 2 |
cavitated compound organ | 4.55e-10 | 31 |
abdominal segment of trunk | 1.11e-09 | 60 |
abdomen | 1.11e-09 | 60 |
gastrointestinal system | 1.19e-07 | 25 |
urinary system structure | 1.48e-07 | 47 |
renal system | 2.31e-07 | 48 |
medulla oblongata | 2.98e-07 | 3 |
myelencephalon | 2.98e-07 | 3 |
future myelencephalon | 2.98e-07 | 3 |
nephron tubule epithelium | 4.99e-07 | 10 |
male genital duct | 8.31e-07 | 3 |
internal male genitalia | 8.31e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 1.84e-10 | 2 |
adenocarcinoma | 3.95e-08 | 25 |