FFCP PHASE1:Hg19::chr18:55102959..55102985,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9480 | |EntrezGene=9480 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8139 | |HGNC=8139 | ||
|TSSclassifier=strong | |||
|UniProt=O95948 | |UniProt=O95948 | ||
|association_with_transcript=42bp_to_ENST00000491143_5end | |association_with_transcript=42bp_to_ENST00000491143_5end | ||
|cluster_id=chr18:55102959..55102985,+ | |||
|description=CAGE_peak_6_at_ONECUT2_5end | |description=CAGE_peak_6_at_ONECUT2_5end | ||
|id=chr18:55102959..55102985,+ | |id=chr18:55102959..55102985,+ | ||
|ontology_enrichment_celltype=CL:0002150!4.18e-07!3;CL:0000861!4.18e-07!3 | |ontology_enrichment_celltype=CL:0002150!4.18e-07!3;CL:0000861!4.18e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002553;7.02e-13;1!CL:0000167;1.11e-12;1!CL:0000164;1.11e-12;1!CL:0000502;1.11e-12;1!CL:0000172;1.11e-12;1!CL:0000173;1.11e-12;1!CL:0000182;9.13e-09;12!CL:0002535;9.27e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,7.03e-13,1;CL:0000167,1.11e-12,1;CL:0000164,1.11e-12,1;CL:0000502,1.11e-12,1;CL:0000172,1.11e-12,1;CL:0000173,1.11e-12,1;CL:0002351,1.11e-12,1;CL:0000182,1.03e-08,12 | |||
|ontology_enrichment_development_v019=UBERON:0010122;4.89e-23;2!UBERON:0004161;2.59e-16;11!UBERON:0009497;7.57e-14;13!UBERON:0006242;7.88e-13;1!CL:0002351;1.11e-12;1!UBERON:0003104;2.95e-08;31 | |||
|ontology_enrichment_disease=DOID:305!4.80e-19!106;DOID:0050687!2.53e-16!143;DOID:14566!3.53e-14!239;DOID:162!5.69e-14!235 | |||
|ontology_enrichment_disease_v019=DOID:4430;1.11e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,1.11e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.52e-19!9;UBERON:0009663!2.65e-12!7;UBERON:0000369!2.63e-10!4;UBERON:0002435!2.63e-10!4;UBERON:0000204!2.63e-10!4;UBERON:0010082!2.63e-10!4;UBERON:0002308!2.35e-09!9;UBERON:0002420!2.35e-09!9;UBERON:0000125!2.35e-09!9;UBERON:0007245!2.35e-09!9;UBERON:0010009!2.35e-09!9;UBERON:0010011!2.35e-09!9;UBERON:0000454!2.35e-09!9;UBERON:0001869!2.52e-08!32;UBERON:0002780!2.95e-08!41;UBERON:0001890!2.95e-08!41;UBERON:0006240!2.95e-08!41;UBERON:0001557!3.29e-08!19;UBERON:0005383!3.42e-08!3;UBERON:0005382!3.42e-08!3;UBERON:0002791!5.44e-08!33;UBERON:0003080!5.56e-08!42;UBERON:0002020!1.12e-07!34;UBERON:0003528!1.12e-07!34;UBERON:0001893!1.12e-07!34;UBERON:0002110!4.65e-07!3;UBERON:0006242!4.65e-07!3;UBERON:0008947!6.80e-07!38;UBERON:0003258!6.80e-07!38 | |||
|ontology_enrichment_uberon_v019=UBERON:0001873;4.89e-23;2!UBERON:0005383;1.05e-15;3!UBERON:0005382;1.05e-15;3!UBERON:0009663;9.55e-15;7!UBERON:0001282;2.91e-12;1!UBERON:0009842;2.91e-12;1!UBERON:0003704;2.91e-12;1!UBERON:0001171;2.91e-12;1!UBERON:0001172;2.91e-12;1!UBERON:0000369;5.10e-12;4!UBERON:0002435;5.10e-12;4!UBERON:0000204;5.10e-12;4!UBERON:0002420;1.33e-11;9!UBERON:0000125;1.33e-11;9!UBERON:0007245;1.33e-11;9!UBERON:0002308;1.33e-11;9!UBERON:0010009;1.33e-11;9!UBERON:0010011;1.33e-11;9!UBERON:0000454;1.33e-11;9!UBERON:0002294;2.56e-07;7!UBERON:0001173;2.56e-07;7!UBERON:0002423;2.68e-07;25!UBERON:0001875;9.27e-07;2!UBERON:0006955;9.27e-07;2!UBERON:0004801;9.27e-07;2!UBERON:0006514;9.27e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001873,3.91e-23,2;UBERON:0010122,3.91e-23,2;UBERON:0005383,9.09e-16,3;UBERON:0005382,9.09e-16,3;UBERON:0009663,7.37e-15,7;UBERON:0000369,4.57e-12,4;UBERON:0002435,4.57e-12,4;UBERON:0000204,4.57e-12,4;UBERON:0010082,4.57e-12,4;UBERON:0001282,4.81e-12,1;UBERON:0009842,4.81e-12,1;UBERON:0003704,4.81e-12,1;UBERON:0001171,4.81e-12,1;UBERON:0001172,4.81e-12,1;UBERON:0002420,1.09e-11,9;UBERON:0000125,1.09e-11,9;UBERON:0007245,1.09e-11,9;UBERON:0002308,1.09e-11,9;UBERON:0010009,1.09e-11,9;UBERON:0010011,1.09e-11,9;UBERON:0000454,1.09e-11,9;UBERON:0009497,2.89e-07,25;UBERON:0000015,2.89e-07,25;UBERON:0002423,2.89e-07,25;UBERON:0006235,2.89e-07,25;UBERON:0004161,2.89e-07,25;UBERON:0001875,7.61e-07,2;UBERON:0006514,7.61e-07,2 | |||
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| ||
|short_description=p6@ONECUT2 | |short_description=p6@ONECUT2 | ||
}} | }} |
Latest revision as of 22:34, 19 September 2015
Short description: | p6@ONECUT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ONECUT2_5end |
Coexpression cluster: | NA |
Association with transcript: | 42bp_to_ENST00000491143_5end |
EntrezGene: | ONECUT2 |
HGNC: | 8139 |
UniProt: | O95948 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 7.03e-13 | 1 |
peptide hormone secreting cell | 1.11e-12 | 1 |
enteroendocrine cell | 1.11e-12 | 1 |
type D enteroendocrine cell | 1.11e-12 | 1 |
somatostatin secreting cell | 1.11e-12 | 1 |
pancreatic D cell | 1.11e-12 | 1 |
progenitor cell of endocrine pancreas | 1.11e-12 | 1 |
hepatocyte | 1.03e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
caudate nucleus | 3.91e-23 | 2 |
future caudate nucleus | 3.91e-23 | 2 |
caudate-putamen | 9.09e-16 | 3 |
dorsal striatum | 9.09e-16 | 3 |
telencephalic nucleus | 7.37e-15 | 7 |
corpus striatum | 4.57e-12 | 4 |
striatum | 4.57e-12 | 4 |
ventral part of telencephalon | 4.57e-12 | 4 |
future corpus striatum | 4.57e-12 | 4 |
intralobular bile duct | 4.81e-12 | 1 |
acinus | 4.81e-12 | 1 |
intrahepatic bile duct | 4.81e-12 | 1 |
portal lobule | 4.81e-12 | 1 |
hepatic acinus | 4.81e-12 | 1 |
basal ganglion | 1.09e-11 | 9 |
neural nucleus | 1.09e-11 | 9 |
nuclear complex of neuraxis | 1.09e-11 | 9 |
nucleus of brain | 1.09e-11 | 9 |
aggregate regional part of brain | 1.09e-11 | 9 |
collection of basal ganglia | 1.09e-11 | 9 |
cerebral subcortex | 1.09e-11 | 9 |
epithelium of foregut-midgut junction | 2.89e-07 | 25 |
anatomical boundary | 2.89e-07 | 25 |
hepatobiliary system | 2.89e-07 | 25 |
foregut-midgut junction | 2.89e-07 | 25 |
septum transversum | 2.89e-07 | 25 |
globus pallidus | 7.61e-07 | 2 |
pallidum | 7.61e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.11e-12 | 1 |