FFCP PHASE1:Hg19::chr6:117785224..117785231,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:117785224..117785231,+ | |||
|description=CAGE_peak_at_chr6:117785224..117785231,+ | |||
|id=chr6:117785224..117785231,+ | |||
|ontology_enrichment_celltype=CL:0000359!1.88e-10!32;CL:0000220!5.72e-10!246;CL:0002321!8.87e-10!248;CL:0000055!1.11e-09!180;CL:0000548!3.26e-08!679;CL:0000004!3.26e-08!679;CL:0000255!3.26e-08!679;CL:0000192!3.47e-08!42;CL:0000514!3.47e-08!42;CL:0000012!4.58e-08!682;CL:0000680!9.63e-07!57;CL:0000056!9.63e-07!57;CL:0000355!9.63e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:1001319;8.94e-20;1!CL:1000600;8.94e-20;1!CL:0002581;2.97e-19;1!CL:0002596;1.64e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,8.95e-20,1;CL:1000600,8.95e-20,1;CL:0002581,2.71e-19,1;CL:0002596,1.72e-10,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4929;2.60e-10;2!DOID:4556;2.71e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,3.58e-10,2;DOID:4556,2.97e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0001637!7.18e-10!42;UBERON:0003509!7.18e-10!42;UBERON:0004572!7.18e-10!42;UBERON:0005256!8.98e-08!143;UBERON:0004573!1.33e-07!33;UBERON:0004571!1.33e-07!33;UBERON:0001981!3.47e-07!60;UBERON:0007500!3.47e-07!60;UBERON:0004537!3.47e-07!60;UBERON:0006965!3.47e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;8.94e-20;1!UBERON:0001256;8.94e-20;1!UBERON:0001259;8.94e-20;1!UBERON:0004913;2.97e-19;1!UBERON:0003703;2.97e-19;1!UBERON:0001174;2.97e-19;1!UBERON:0004914;2.97e-19;1!UBERON:0002394;6.76e-19;4!UBERON:0003928;6.76e-19;4!UBERON:0000365;1.56e-15;5!UBERON:0005910;4.13e-13;6!UBERON:0002294;3.14e-11;7!UBERON:0001173;3.14e-11;7!UBERON:0001255;1.43e-10;2!UBERON:0001556;1.43e-10;2!UBERON:0005396;1.64e-10;2!UBERON:0005406;2.60e-10;2!UBERON:0000058;3.89e-08;10!UBERON:0002114;2.71e-07;2!UBERON:0000486;5.23e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,8.95e-20,1;UBERON:0001256,8.95e-20,1;UBERON:0001259,8.95e-20,1;UBERON:0004913,5.62e-19,1;UBERON:0003703,5.62e-19,1;UBERON:0001174,5.62e-19,1;UBERON:0004914,5.62e-19,1;UBERON:0000365,1.62e-15,5;UBERON:0005910,4.26e-13,6;UBERON:0002394,8.78e-13,6;UBERON:0003928,8.78e-13,6;UBERON:0001255,1.43e-10,2;UBERON:0001556,1.43e-10,2;UBERON:0005396,1.72e-10,2;UBERON:0005406,2.49e-10,2;UBERON:0002294,7.75e-09,9;UBERON:0001173,7.75e-09,9;UBERON:0004912,7.75e-09,9;UBERON:0002114,3.35e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0.602694528023977,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.626984899610432,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0.436094052142534,0,0.506522046658319,0.926864265692532,0,0.354668382198357,0,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0.309977343527296,0,0.247266929278557,0,0,0,0,0.831192346452549,0,0.30648779579902,0,0,0.89694817844431,0,0,0,0.103052529238439,0,0,0,0,0,0,0.161646056818812,0,0.201504196455281,0.339121184620975,0.773043412653187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.425325291727159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0.799266537048298,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.434343920002738,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0,0.347534457872331,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,1.48418066444991,0,0,0,0,0,0,0.40101294060657,0.184161977871793,0.114814448164607,0.182091168006717,0.131124414959424,0.451199612907412,0,0,0,0.105551628892876,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0,0,0.826424576804891,0.768760269460425,1.91419068741876,0,0,0,0.6970372701606,0,1.59691809095107,0,0.18532421910392,0.572499546967965,0,0,0.190630193923825,0,0,0.318203247925937,2.35484592059769,0,0,0,0.404364963146632,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0.405820753925408,0.30982349809975,0.845086807596724,0,0.0982490410131212,0,0.354761064070598,0,0,0,0,0,0,0,0,1.29151611801369,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0.102268682502155,0,0.311039587661807,1.07842021376792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34823682632161,0,0,0,0,0,0,0,0,0.822251547880505,0.19871461170299,0,0,0.801588202515337,0,0,0,0,0,0.14405479798815,0,0,0.407712618220842,0.418411385249333,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15149118391667,0,0,0,0.542999601753713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0.414706207840855,0.265841714557995,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,1.62065732026684,0.489473409012935,0.179088841081487,0,0,0.176689145945881,0,0.168942440653073,0,0,2.43087964941906,0,0,0,0,0,0.245772908753719,0.633936370075881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577628330751691,0,0,0,0,0.40341013740704,0,0,0.818859587550484,1.03499260351932,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236664001461131,0,0,0,0,0.955538938977433,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,7.40769744359868,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:117785224..117785231,+ | |||
}} |
Latest revision as of 18:44, 30 July 2015
Short description: | p@chr6:117785224..117785231, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:117785224..117785231, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 8.95e-20 | 1 |
lower urinary tract cell | 8.95e-20 | 1 |
perirenal preadipocyte | 2.71e-19 | 1 |
smooth muscle cell of the carotid artery | 1.72e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 8.95e-20 | 1 |
wall of urinary bladder | 8.95e-20 | 1 |
mucosa of urinary bladder | 8.95e-20 | 1 |
hepatopancreatic ampulla | 5.62e-19 | 1 |
extrahepatic bile duct | 5.62e-19 | 1 |
common bile duct | 5.62e-19 | 1 |
duodenal papilla | 5.62e-19 | 1 |
urothelium | 1.62e-15 | 5 |
transitional epithelium | 4.26e-13 | 6 |
bile duct | 8.78e-13 | 6 |
digestive system duct | 8.78e-13 | 6 |
urinary bladder | 1.43e-10 | 2 |
lower urinary tract | 1.43e-10 | 2 |
carotid artery segment | 1.72e-10 | 2 |
perirenal fat | 2.49e-10 | 2 |
biliary system | 7.75e-09 | 9 |
biliary tree | 7.75e-09 | 9 |
biliary bud | 7.75e-09 | 9 |
duodenum | 3.35e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 3.58e-10 | 2 |
lung large cell carcinoma | 2.97e-07 | 3 |