FFCP PHASE1:Hg19::chr10:32217792..32217801,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=94134 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16348 | |||
|TSSclassifier=strong | |||
|UniProt=Q8IWW6,Q504X1 | |||
|association_with_transcript=-22bp_to_NM_018287,uc001ivz.1,uc001iwb.1,uc001iwc.1,uc001iwd.1,uc009xlq.1,uc009xlr.1,uc009xls.2_5end | |||
|description=CAGE_peak_4_at_ARHGAP12_5end | |||
|id=chr10:32217792..32217801,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000784;1.70e-10;3!CL:0000222;1.70e-08;1!CL:0002553;1.70e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,1.79e-10,3;CL:0002553,9.46e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0006298;1.70e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon_v019=UBERON:0001870;8.63e-11;3!UBERON:0005383;1.70e-10;3!UBERON:0005382;1.70e-10;3!UBERON:0002581;1.70e-08;1!UBERON:0001874;1.70e-08;1!UBERON:0001736;1.70e-08;1!UBERON:0000369;4.37e-08;4!UBERON:0002435;4.37e-08;4!UBERON:0002346;4.37e-08;4!UBERON:0000923;4.37e-08;4!UBERON:0010316;4.37e-08;4!UBERON:0005291;4.37e-08;4!UBERON:0000204;4.37e-08;4!UBERON:0003528;1.82e-07;34!UBERON:0002020;1.82e-07;34!UBERON:0001869;4.75e-07;32!UBERON:0002791;5.29e-07;32!UBERON:0001893;9.31e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001870,4.59e-11,3;UBERON:0005383,6.16e-11,3;UBERON:0005382,6.16e-11,3;UBERON:0001874,7.56e-09,1;UBERON:0001736,1.18e-08,1;UBERON:0006298,1.18e-08,1;UBERON:0000369,2.06e-08,4;UBERON:0002435,2.06e-08,4;UBERON:0000204,2.06e-08,4;UBERON:0010082,2.06e-08,4;UBERON:0002581,3.53e-08,1;UBERON:0002791,1.52e-07,32;UBERON:0001869,1.52e-07,32;UBERON:0003528,4.42e-07,34;UBERON:0002020,4.42e-07,34;UBERON:0001893,4.42e-07,34 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.422863212287913,0,0.446961094427288,0,0,0,0,0,0,0.436882744260345,0,0.123766352960047,0,0,0,0,0.487932798790507,0,0,0,0.286235987131057,0.273748850145768,0.87879847716362,0.229240217243854,0.164201178899891,0.393553906568396,0,0,0,0,0,0,0.154934401160603,0.284338464974843,0.293600439334847,0,0.200544447470142,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0.889509253863555,0.426730222566507,0.400395987036012,0,0.661044872784862,0,0,0,0.382273228125229,0,0,0.263384084775077,0.983548850569165,1.17903228824749,0.411202997999018,0.501559486172034,0.651844533267181,0.473447805734733,0,0.334231370655521,0.294605907474837,0.443067789167242,0,0.384273959177026,0.130059347559878,0,0,0,0.593146252648242,0.802622484269139,0,0.226618685395132,0.383220493601921,0.34362744548263,0.253019692019503,0.318565414324097,0,0,0,0.127986611154418,0,0.710331756132051,0,0.604820229674197,0.267440195783507,0.144824403882799,0,0,0,0,0,0.144846518960824,0,0,0.567208902984407,0.221729397462564,0.175669571386252,0.0654895377488563,0,0,0,0.174129737299267,0,1.43094374583205,1.14398982156026,0.371457501329565,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0,0,0.379891534993739,0.264818361626438,0,0,0,0,0.49333509683432,0,0.134710672069688,0,0,0,0,0,0,0.298897361103602,0,0,0,0.204154171254893,0,0.516628905878827,0,0,0,0,0,0.250237039743928,0.554128230968366,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0.257640540045629,0.18611685633159,0,0.0974370051611986,0,0.184099797284599,0,0,0.10075209822764,0,0.193260853163297,0,0,0.731842236777572,0.265059536642971,1.04574548582567,0.621966330092223,0.504641701751257,0.36497735907583,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0.171567810298526,0.439001141634502,0,0.100528972411631,0.277765335475589,0,0,0,1.04337364477569,0.821860859650752,0,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0,0.141775097242386,0,0,0,0,0,0,0.144119953416961,0.12624243342638,0.253991577168676,0,0,0,0.411309970813294,0,0.285826432630578,0.112131084345361,0,0.07333828582095,0,0,0,0.531876233169741,0,0,0,0.266422179016099,0,0,0,0,0.355391948742546,0,0.602878754119172,0,0.399891964728228,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0.112085143993527,0.985153801009636,1.07813787429759,0.128343036279748,1.27047312111232,0,0,0.167516265334349,0,0,0,0,0.36807447515742,0.500170521059677,0,0.207970861530807,0,0,0.234282829985426,0,2.27407504055985,0,0,0,0.260650843404249,0,0,0.620304078368662,0.215714200818617,0.320182673410333,0,0,0,0.248107807818777,0,0,0.384417447767103,0.511707249066704,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0.0920809889358963,0.114814448164607,0,0.262248829918848,0,0,0,0,0.211103257785751,0,0,0.431831832204279,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0.328014645699706,0,0.103041011647722,0.0915694648183434,0.247528499761764,0,0,0,0,0.308097234229289,0.15350367472613,0,0.107420244868274,0.290033387828457,0,0.178064071293475,0,0,0.127612712494584,0,0,0,0.6970372701606,0,0,0,0,0,0.372158369359667,0.632758849437452,0.571890581771475,0,0,0,0,0.179872457583315,0,0.235624804691373,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0.354761064070598,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0.743212700502875,0.577076851905779,0.711418433484141,0.478278818186467,0,0,0,0.324621940274555,0.280797178113459,0.684704037099577,0,0,0.169291777801603,0.1605880751037,0,0,0,0,0,0,0.19538809540204,0.278406173895242,1.23087398947712,0,0.99921590399346,0,0.18714054040822,0,0.485442086998054,0.334330152832435,0,0.23874448473769,0.296964680832639,0.307160702099232,0,0.281338832821026,0.445234820091624,0,0.844501632511974,0.597743964753209,0,0,0,0.123084805461069,0.311039587661807,0,0,0,0.197286811273867,0,0,0,1.57705766875147,0,0,0.174919999992391,0,0.227586896570999,0,0.236387681767936,0.344743373241465,0,0.173624994933292,1.77148277162768,0.241192877250816,0,0.331737779793674,0.591095237907095,1.31631238292384,0.21787692703798,0.139423744278603,0.461701551022782,0.113942055847001,0,0.269272933229316,0.108647371922008,0,0.0915975934018623,0,0,0,0,0.225595660617181,0.588187602953219,0,0.189753732724185,0,0,0.163232808159148,0.706765357169704,0,0,0.0884575645033392,0.611030144933625,0,0.617819694732514,0.313265848516366,0.337005664903385,0,0,0.182454789215666,0.19566461893209,0.242780379534093,0.394584402849391,0,0.91821828489147,0.189559738885464,0,0.207376382794494,0.664653872707185,0.330991955875499,0,1.19472429772959,0,0.416024019039416,0.173559738335131,0,0.0870592065804026,0.698906672968121,0.171986032471617,0,0,0.0821154570532092,0.0969890164884194,0.617792886840502,0.451961481561065,0.411125773940253,0,1.96263467463224,0.195551382734803,0.480952921509202,0,0.39961921916426,0.1440904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| |||
|short_description=p4@ARHGAP12 | |||
}} |
Revision as of 02:29, 11 January 2014
Short description: | p4@ARHGAP12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ARHGAP12_5end |
Coexpression cluster: | NA |
Association with transcript: | -22bp_to_NM_018287, uc001ivz.1, uc001iwb.1, uc001iwc.1, uc001iwd.1, uc009xlq.1, uc009xlr.1, uc009xls.2_5end |
EntrezGene: | ARHGAP12 |
HGNC: | 16348 |
UniProt: | Q8IWW6Q504X1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 1.79e-10 | 3 |
lung fibroblast | 9.46e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
frontal cortex | 4.59e-11 | 3 |
caudate-putamen | 6.16e-11 | 3 |
dorsal striatum | 6.16e-11 | 3 |
putamen | 7.56e-09 | 1 |
submandibular gland | 1.18e-08 | 1 |
submandibular gland primordium | 1.18e-08 | 1 |
corpus striatum | 2.06e-08 | 4 |
striatum | 2.06e-08 | 4 |
ventral part of telencephalon | 2.06e-08 | 4 |
future corpus striatum | 2.06e-08 | 4 |
postcentral gyrus | 3.53e-08 | 1 |
regional part of telencephalon | 1.52e-07 | 32 |
cerebral hemisphere | 1.52e-07 | 32 |
brain grey matter | 4.42e-07 | 34 |
gray matter | 4.42e-07 | 34 |
telencephalon | 4.42e-07 | 34 |