FFCP PHASE1:Hg19::chr1:186273229..186273260,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:186273229..186273260,+ | |||
|coexpression_cluster_id=C287 | |coexpression_cluster_id=C287 | ||
|description=CAGE_peak_at_chr1:186273229..186273260,+ | |description=CAGE_peak_at_chr1:186273229..186273260,+ | ||
|id=chr1:186273229..186273260,+ | |id=chr1:186273229..186273260,+ | ||
|ontology_enrichment_celltype=CL:0000153!1.38e-14!9;CL:0000447!1.38e-14!9;CL:0000667!1.21e-11!6;CL:0000058!1.21e-11!6;CL:0000138!1.21e-11!6;CL:0000327!6.57e-09!14;CL:0002570!7.24e-08!8 | |ontology_enrichment_celltype=CL:0000153!1.38e-14!9;CL:0000447!1.38e-14!9;CL:0000667!1.21e-11!6;CL:0000058!1.21e-11!6;CL:0000138!1.21e-11!6;CL:0000327!6.57e-09!14;CL:0002570!7.24e-08!8 | ||
|ontology_enrichment_celltype_v019=CL:0000153;2.10e-29;9!CL:0000447;2.10e-29;9!CL:0000138;3.20e-20;6!CL:0000327;1.86e-17;15!CL:0000499;3.59e-12;28!CL:0000214;6.63e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,2.11e-29,9;CL:0000447,2.11e-29,9;CL:0000058,3.12e-20,6;CL:0000138,3.12e-20,6;CL:0000327,1.86e-17,15;CL:0000499,3.68e-12,28;CL:0000214,6.79e-11,3;CL:0000151,5.91e-07,36 | |||
|ontology_enrichment_development_v019=UBERON:0004874;2.95e-08;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001013!3.13e-08!14;UBERON:0003978!5.21e-08!3;UBERON:0009751!5.21e-08!3;UBERON:0000946!5.21e-08!3;UBERON:0002523!5.21e-08!3;UBERON:0005983!5.21e-08!3;UBERON:0002165!5.21e-08!3;UBERON:0002062!5.21e-08!3;UBERON:0007280!5.21e-08!3;UBERON:0007100!3.51e-07!27 | |ontology_enrichment_uberon=UBERON:0001013!3.13e-08!14;UBERON:0003978!5.21e-08!3;UBERON:0009751!5.21e-08!3;UBERON:0000946!5.21e-08!3;UBERON:0002523!5.21e-08!3;UBERON:0005983!5.21e-08!3;UBERON:0002165!5.21e-08!3;UBERON:0002062!5.21e-08!3;UBERON:0007280!5.21e-08!3;UBERON:0007100!3.51e-07!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0006915;6.63e-11;3!UBERON:0007616;6.63e-11;3!UBERON:0002217;6.63e-11;3!UBERON:0002018;6.63e-11;3!UBERON:0002107;1.80e-09;19!UBERON:0006925;1.80e-09;19!UBERON:0001013;2.00e-08;14!UBERON:0000989;2.95e-08;1!UBERON:0002134;2.95e-08;1!UBERON:0008811;2.95e-08;1!UBERON:0005208;2.95e-08;1!UBERON:0004145;2.95e-08;1!UBERON:0005946;2.95e-08;1!UBERON:0005965;2.95e-08;1!UBERON:0002078;2.95e-08;1!UBERON:0002423;3.84e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,6.79e-11,3;UBERON:0007616,6.79e-11,3;UBERON:0002217,6.79e-11,3;UBERON:0002018,6.79e-11,3;UBERON:0002107,1.79e-09,19;UBERON:0006925,1.79e-09,19;UBERON:0008836,1.79e-09,19;UBERON:0001013,2.12e-08,14;UBERON:0000989,2.29e-08,1;UBERON:0008811,2.29e-08,1;UBERON:0006258,2.29e-08,1;UBERON:0005876,2.29e-08,1;UBERON:0004874,2.29e-08,1;UBERON:0002134,2.46e-08,1;UBERON:0005208,2.46e-08,1;UBERON:0005946,2.46e-08,1;UBERON:0005965,2.46e-08,1;UBERON:0002078,2.46e-08,1;UBERON:0008835,3.76e-08,22;UBERON:0003894,3.76e-08,22;UBERON:0009854,8.70e-08,23;UBERON:0007499,3.82e-07,25;UBERON:0009497,3.82e-07,25;UBERON:0000015,3.82e-07,25;UBERON:0002423,3.82e-07,25;UBERON:0006235,3.82e-07,25;UBERON:0004161,3.82e-07,25;UBERON:0009856,7.35e-07,26 | |||
|phase1_expression=0.363356758541113,0.642301571672949,0.140954404095971,0,0,0,0,6.31719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0,0,0,0,0,0,0,0.221533894583621,0,0.25618263945135,0.260118695119756,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0.255973222308837,0,0,0,0,0,0,2.43806866313962,0,0,5.78302643815306,0.50133791063589,7.9665585428453,23.0632924644819,18.9787599418028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0.302714855289863,1.15235184896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4079531339648,6.87979051674338,8.27105869353966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0.154209693802656,0.710246901252508,0.739144404124282,0,0.697262270759755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33953315142039,0,0,0,0,0,0,0,0.307007349452259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,5.69990615303693,13.8303855043159,0,0,0,0,0,1.31801321087491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17206543417515,0,0,0,0,0,0,0,0,0,0,0,1.9924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.63186579628488,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,1.43574604915363,0,0.858452096273142,0,0.0671834724867263,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,4.10346254298631,1.32506888912221,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.47764408660622,0.233713309847224,3.32883516901568,0,0,3.55924488638614,0.457680136793847,0.151230923763239,2.95330681107283,0,0,0,0,2.48823724704513,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0.673498977531838,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,1.48863353516788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,1.23195368227496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,2.31087814315709,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0.852935927603924,0,0,0.186224142887574,0,0,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.402547587182052,0 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|phase1_expression=0.363356758541113,0.642301571672949,0.140954404095971,0,0,0,0,6.31719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0,0,0,0,0,0,0,0.221533894583621,0,0.25618263945135,0.260118695119756,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0.255973222308837,0,0,0,0,0,0,2.43806866313962,0,0,5.78302643815306,0.50133791063589,7.9665585428453,23.0632924644819,18.9787599418028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0.302714855289863,1.15235184896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4079531339648,6.87979051674338,8.27105869353966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0.154209693802656,0.710246901252508,0.739144404124282,0,0.697262270759755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33953315142039,0,0,0,0,0,0,0,0.307007349452259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,5.69990615303693,13.8303855043159,0,0,0,0,0,1.31801321087491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17206543417515,0,0,0,0,0,0,0,0,0,0,0,1.9924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.63186579628488,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,1.43574604915363,0,0.858452096273142,0,0.0671834724867263,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,4.10346254298631,1.32506888912221,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.47764408660622,0.233713309847224,3.32883516901568,0,0,3.55924488638614,0.457680136793847,0.151230923763239,2.95330681107283,0,0,0,0,2.48823724704513,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0.673498977531838,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,1.48863353516788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,1.23195368227496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,2.31087814315709,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0.852935927603924,0,0,0.186224142887574,0,0,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | ||
|short_description=p@chr1:186273229..186273260,+ | |short_description=p@chr1:186273229..186273260,+ | ||
}} | }} |
Latest revision as of 01:29, 28 July 2015
Short description: | p@chr1:186273229..186273260, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:186273229..186273260, + |
Coexpression cluster: | C287_Hepatocyte_Chondrocyte_Adipocyte_Synoviocyte_liver_tenocyte_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 2.11e-29 | 9 |
carbohydrate secreting cell | 2.11e-29 | 9 |
chondroblast | 3.12e-20 | 6 |
chondrocyte | 3.12e-20 | 6 |
extracellular matrix secreting cell | 1.86e-17 | 15 |
stromal cell | 3.68e-12 | 28 |
synovial cell | 6.79e-11 | 3 |
secretory cell | 5.91e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 6.79e-11 | 3 |
layer of synovial tissue | 6.79e-11 | 3 |
synovial joint | 6.79e-11 | 3 |
synovial membrane of synovial joint | 6.79e-11 | 3 |
liver | 1.79e-09 | 19 |
digestive gland | 1.79e-09 | 19 |
liver bud | 1.79e-09 | 19 |
adipose tissue | 2.12e-08 | 14 |
penis | 2.29e-08 | 1 |
intromittent organ | 2.29e-08 | 1 |
lateral plate mesenchyme | 2.29e-08 | 1 |
undifferentiated genital tubercle | 2.29e-08 | 1 |
somatopleure | 2.29e-08 | 1 |
tricuspid valve | 2.46e-08 | 1 |
right atrium valve | 2.46e-08 | 1 |
outflow tract of atrium | 2.46e-08 | 1 |
outflow part of right atrium | 2.46e-08 | 1 |
right cardiac atrium | 2.46e-08 | 1 |
hepatic diverticulum | 3.76e-08 | 22 |
liver primordium | 3.76e-08 | 22 |
digestive tract diverticulum | 8.70e-08 | 23 |
epithelial sac | 3.82e-07 | 25 |
epithelium of foregut-midgut junction | 3.82e-07 | 25 |
anatomical boundary | 3.82e-07 | 25 |
hepatobiliary system | 3.82e-07 | 25 |
foregut-midgut junction | 3.82e-07 | 25 |
septum transversum | 3.82e-07 | 25 |
sac | 7.35e-07 | 26 |