FFCP PHASE1:Hg19::chr20:61733948..61733984,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=768097 | |EntrezGene=768097 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=33118 | |HGNC=33118 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-277bp_to_NR_003245,uc002yee.1_5end | |association_with_transcript=-277bp_to_NR_003245,uc002yee.1_5end | ||
|cluster_id=chr20:61733948..61733984,- | |||
|description=CAGE_peak_1_at_HAR1B_5end | |description=CAGE_peak_1_at_HAR1B_5end | ||
|id=chr20:61733948..61733984,- | |id=chr20:61733948..61733984,- | ||
|ontology_enrichment_celltype=CL:0000791!1.95e-08!18;CL:0000789!1.95e-08!18;CL:0002420!1.95e-08!18;CL:0002419!1.95e-08!18;CL:0000790!1.95e-08!18;CL:0000084!5.93e-07!25;CL:0000827!5.93e-07!25 | |ontology_enrichment_celltype=CL:0000791!1.95e-08!18;CL:0000789!1.95e-08!18;CL:0002420!1.95e-08!18;CL:0002419!1.95e-08!18;CL:0000790!1.95e-08!18;CL:0000084!5.93e-07!25;CL:0000827!5.93e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.39e-13;18!CL:0000789;1.39e-13;18!CL:0002419;1.39e-13;18!CL:0000084;9.35e-11;25!CL:0000624;4.16e-10;6!CL:0000625;5.77e-07;11!CL:0000226;6.59e-07;3!CL:0000623;6.59e-07;3!CL:0000842;6.59e-07;3 | |ontology_enrichment_celltype_v019=CL:0000791;1.39e-13;18!CL:0000789;1.39e-13;18!CL:0002419;1.39e-13;18!CL:0000084;9.35e-11;25!CL:0000624;4.16e-10;6!CL:0000625;5.77e-07;11!CL:0000226;6.59e-07;3!CL:0000623;6.59e-07;3!CL:0000842;6.59e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.80e-14,18;CL:0000789,4.80e-14,18;CL:0002420,4.80e-14,18;CL:0002419,4.80e-14,18;CL:0000790,4.80e-14,18;CL:0000084,4.49e-11,25;CL:0000827,4.49e-11,25;CL:0000624,2.65e-10,6;CL:0000838,1.20e-09,52;CL:0000542,2.23e-09,53;CL:0000051,2.23e-09,53;CL:0000625,3.00e-07,11;CL:0000226,3.15e-07,3;CL:0000842,3.15e-07,3;CL:0000623,4.09e-07,3;CL:0000825,4.09e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;1.39e-13;18 | |ontology_enrichment_development_v019=CL:0000790;1.39e-13;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.79e-12!115;UBERON:0000178!1.86e-08!15;UBERON:0000179!1.86e-08!15;UBERON:0000463!1.86e-08!15 | |ontology_enrichment_uberon=UBERON:0007023!4.79e-12!115;UBERON:0000178!1.86e-08!15;UBERON:0000179!1.86e-08!15;UBERON:0000463!1.86e-08!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0003296;1.00e-10;4!UBERON:0010133;1.00e-10;4!UBERON:0000178;2.12e-08;15!UBERON:0000179;2.12e-08;15!UBERON:0000463;2.12e-08;15!UBERON:0001264;2.04e-07;10!UBERON:0005383;6.59e-07;3!UBERON:0005382;6.59e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0003296;1.00e-10;4!UBERON:0010133;1.00e-10;4!UBERON:0000178;2.12e-08;15!UBERON:0000179;2.12e-08;15!UBERON:0000463;2.12e-08;15!UBERON:0001264;2.04e-07;10!UBERON:0005383;6.59e-07;3!UBERON:0005382;6.59e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,8.29e-11,4;UBERON:0010133,8.29e-11,4;UBERON:0000178,9.05e-09,15;UBERON:0000179,9.05e-09,15;UBERON:0000463,9.05e-09,15;UBERON:0001264,2.43e-07,10;UBERON:0005383,4.46e-07,3;UBERON:0005382,4.46e-07,3 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,1.0007329835313,0.446961094427288,0,0,0.631719873426831,0.783556884599516,0,0,0,0,0,0,0,0,0,0.975865597581014,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0,0.393364276848904,1.15148819429164,0.928896739896456,0,0.30120591877825,0.369754010166788,0,0,0,0.553995408531877,0.601633342410425,0.868043482863407,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0.211255286311942,0.212604299965044,0,0,0.300353785683013,0,0.570025487482497,0.19891667719909,0.547992461293902,0,0,0.889509253863555,0,0,1.14950487990897,0.661044872784862,0.954053754535364,0,0,0.382273228125229,0,0,0,4.13090517239049,1.96505381374582,2.2616164889946,0.668745981562712,4.23698946623668,5.6813736688168,11.6896037044747,0.334231370655521,0.883817722424512,1.99380505125259,0.812411591295047,0.896639238079726,0.910415432919148,1.15106533222573,2.21080014228679,0.579606171470105,2.96573126324121,2.67540828089713,3.1360657141493,0.566546713487831,2.68254345521345,2.74901956386104,1.51811815211702,0.637130828648193,2.60433381542567,0,0.752875595388864,1.66382594500744,0,0.947109008176067,1.64225599384209,1.61285394579786,3.20928234940209,3.18613688542158,0,0.670700859703636,0.12786256184353,1.0843174571537,1.00267582127178,0.579386075843295,0,1.45990461090791,0,0,0,0.458426764241994,0,0,0,0,0.132957960518865,0,0,0,0,0,0.347140501607594,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0.286836620748814,0.354668382198357,0,1.06748995729705,0.49333509683432,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0,0.117434498643765,0,0,0.816616685019573,0,0.206651562351531,0,0.741800787835671,0,0,0,0.125118519871964,0,0.438977620880838,0.612975591598039,0.600952235626387,0,0.358779271377724,1.06778694409284,0.211931901159562,0.600182192168805,0.412210116953756,0.515281080091258,0,0.675105328965065,0.0974370051611986,0,0.460249493211497,1.2931684545505,0.710019185033229,0.10075209822764,0.339121184620975,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0.721879481669586,0.118306800039844,0.168584690078102,0,0.330881918197182,0,0.237270619111097,0.404493924480493,0,0,0,0,0.4115740113314,0,0,0,0,1.32438929824395,0,0,0.219500570817251,0,0.100528972411631,0,0.651616610620649,0,0,0,0,0,0,0,0.790204397959275,1.71697232418975,0,0,0.148631162288728,0,0,0,0,0,0,0.985326475791887,0.616339038092582,0.829312462163088,0.288239906833923,1.13618190083742,0,0.381988425558278,1.17217447210047,0,0,0,0,0,0,0.07333828582095,0.517086863031111,3.57656445851882,0,0,0,0.257207374262142,0,0,0,0,0,0.325736184293735,0,0,1.50719688529793,0.871533458600294,0.099972991182057,1.2162378064119,0,0,0.239624855491583,0,0,0.579125226670317,0.410952645100767,0.179060963239896,0,1.18218456121156,1.94064817373566,1.41177339907723,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0.415941723061614,0.356857977594324,0.157702415033935,0,0,0,1.03473071292505,0,0.184369168541703,0.173767228936166,0,0,1.44737618286021,1.72571360654893,1.38745825144478,0.303127571446259,0,0.30239029332968,0.744323423456331,0,0.280660094433074,0.128139149255701,1.02341449813341,0.321707842287215,1.48418066444991,0,0,0.246381468041427,0,0,0,0,0.0920809889358963,0,0.182091168006717,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0.082509499920588,0,0,0,0,0,0,0,0.322260734604821,0.145016693914229,0,0.267096106940212,0.165284915360978,0,0,0,0,0,0,0,0,0,0.55597265731176,0.286249773483982,0,0,0.38126038784765,0,0,0.636406495851874,0.78494864019923,0,0.274537029736055,0,0.606547444719948,0,0,0,1.21856744815642,0,0.545999645631943,0.424216295861138,1.13008116620243,0,0,0.438450885253763,0.578775534266688,1.31178950409327,0,0,0,0,0,0,0,1.05553817648832,1.97576935775941,0,0.699869440489966,0.0962221127255121,0,0,0.376575203107117,0.43050537267123,0,0,0,0.507447609232169,0.764637207142375,1.70894156152249,0.952927101831156,1.64544909234478,0.648473311192717,0.540031437238115,0.79312517629427,0,0,0,0,1.00988449083511,0,0.159426272728822,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,3.18138918693974,0.146508179271894,0.121360521749513,1.22587722705226,0.568272293612826,0,0,0.307160702099232,0,0.422008249231538,0,0.16480387422676,0,0.597743964753209,0.828851746593443,0,0,0,0.311039587661807,0,0.358042349351218,0,0.394573622547734,0,1.11136990144637,0.969332746095218,0.371072392647405,0,0.520855522170466,0,0,1.593108275997,0,0.236387681767936,0,0,0.694499979733169,1.77148277162768,1.5677537021303,0,0.884634079449797,0.591095237907095,0.87754158861589,0,0.557694977114413,0.384751292518985,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,3.55825354416746,3.21266241260907,4.07245603071276,0.134802265961354,0,0,0,1.17398771359254,2.18502341580683,0.789168805698781,0,0,1.5796644907122,0.150323419414493,0,1.32930774541437,2.31694369112849,1.56966459203613,1.19472429772959,0,0,0.173559738335131,0,0.69647365264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| ||
|short_description=p1@HAR1B | |short_description=p1@HAR1B | ||
}} | }} |
Latest revision as of 12:13, 17 September 2015
Short description: | p1@HAR1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HAR1B_5end |
Coexpression cluster: | NA |
Association with transcript: | -277bp_to_NR_003245, uc002yee.1_5end |
EntrezGene: | HAR1B |
HGNC: | 33118 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 4.80e-14 | 18 |
alpha-beta T cell | 4.80e-14 | 18 |
immature T cell | 4.80e-14 | 18 |
mature T cell | 4.80e-14 | 18 |
immature alpha-beta T cell | 4.80e-14 | 18 |
T cell | 4.49e-11 | 25 |
pro-T cell | 4.49e-11 | 25 |
CD4-positive, alpha-beta T cell | 2.65e-10 | 6 |
lymphoid lineage restricted progenitor cell | 1.20e-09 | 52 |
lymphocyte | 2.23e-09 | 53 |
common lymphoid progenitor | 2.23e-09 | 53 |
CD8-positive, alpha-beta T cell | 3.00e-07 | 11 |
single nucleate cell | 3.15e-07 | 3 |
mononuclear cell | 3.15e-07 | 3 |
natural killer cell | 4.09e-07 | 3 |
pro-NK cell | 4.09e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
gland of diencephalon | 8.29e-11 | 4 |
neuroendocrine gland | 8.29e-11 | 4 |
blood | 9.05e-09 | 15 |
haemolymphatic fluid | 9.05e-09 | 15 |
organism substance | 9.05e-09 | 15 |
pancreas | 2.43e-07 | 10 |
caudate-putamen | 4.46e-07 | 3 |
dorsal striatum | 4.46e-07 | 3 |