FFCP PHASE1:Hg19::chr11:16629621..16629629,-
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Short description: | p30@SOX6 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_30_at_SOX6_5end |
Coexpression cluster: | C90_neuroectodermal_peripheral_neuroepithelioma_neuroblastoma_carcinoid_parietal_putamen |
Association with transcript: | -347bp_to_ENST00000525835_5end |
EntrezGene: | SOX6 |
HGNC: | 16421 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p30@SOX6 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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neural tissue | 2.84e-66 | 2 |
cranial nerve II | 7.06e-34 | 1 |
cranial nerve | 7.06e-34 | 1 |
nerve trunk | 7.06e-34 | 1 |
nerve connecting eye with brain | 7.06e-34 | 1 |
nerve | 7.06e-34 | 1 |
retinal neural layer | 7.06e-34 | 1 |
presumptive neural retina | 7.06e-34 | 1 |
multi cell component structure | 1.07e-17 | 2 |
neuron projection bundle | 1.07e-17 | 2 |
Showing 1 to 10 of 17 entries
Ontology term | p-value | n |
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neuroectodermal tumor | 6.03e-53 | 10 |
germ cell and embryonal cancer | 1.61e-24 | 22 |
germ cell cancer | 1.61e-24 | 22 |
peripheral nerve sheath neoplasm | 6.48e-18 | 2 |
neurofibroma | 6.48e-18 | 2 |
peripheral nervous system neoplasm | 2.07e-12 | 3 |
sarcoma | 1.25e-07 | 20 |
neuroendocrine tumor | 7.58e-07 | 6 |
Showing 1 to 8 of 8 entries