FFCP PHASE2:Hg19::chr17:48272818..48272860,-
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Short description: | p49@COL1A1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_49_at_COL1A1_5end |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | -199bp_to_J00110, K01228_5end |
EntrezGene: | COL1A1 |
HGNC: | 2197 |
UniProt: | P02452 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p49@COL1A1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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fibroblast | 5.76e-20 | 76 |
multi fate stem cell | 1.54e-11 | 427 |
somatic stem cell | 5.89e-11 | 433 |
stem cell | 3.29e-10 | 441 |
muscle cell | 4.08e-09 | 55 |
muscle precursor cell | 2.92e-08 | 58 |
myoblast | 2.92e-08 | 58 |
multi-potent skeletal muscle stem cell | 2.92e-08 | 58 |
smooth muscle cell | 1.39e-07 | 43 |
smooth muscle myoblast | 1.39e-07 | 43 |
Showing 1 to 10 of 16 entries
Ontology term | p-value | n |
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skeletal muscle tissue | 3.77e-09 | 62 |
striated muscle tissue | 3.77e-09 | 62 |
myotome | 3.77e-09 | 62 |
omentum | 5.34e-09 | 6 |
peritoneum | 5.34e-09 | 6 |
abdominal cavity | 5.34e-09 | 6 |
visceral peritoneum | 5.34e-09 | 6 |
dense mesenchyme tissue | 9.27e-09 | 73 |
muscle tissue | 1.30e-08 | 64 |
musculature | 1.30e-08 | 64 |
Showing 1 to 10 of 24 entries