FFCP PHASE2:Hg19::chr19:35739679..35739690,+
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Short description: | p6@LSR |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_LSR_5end |
Coexpression cluster: | C1817_Alveolar_smallcell_acantholytic_Hepatocyte_squamous_liver_mesothelioma |
Association with transcript: | -91bp_to_ENST00000347609, uc002nyp.2_5end |
EntrezGene: | LSR |
HGNC: | 29572 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p6@LSR |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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epithelial cell | 1.19e-18 | 253 |
embryonic stem cell | 2.87e-13 | 5 |
kidney tubule cell | 6.17e-09 | 10 |
nephron tubule epithelial cell | 6.17e-09 | 10 |
kidney cell | 1.20e-08 | 17 |
kidney epithelial cell | 1.20e-08 | 17 |
epithelial cell of prostate | 1.28e-08 | 3 |
epithelial cell of nephron | 7.66e-08 | 15 |
extraembryonic cell | 1.09e-07 | 19 |
endodermal cell | 1.60e-07 | 58 |
Showing 1 to 10 of 10 entries
Ontology term | p-value | n |
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extraembryonic membrane | 1.36e-13 | 14 |
membranous layer | 1.36e-13 | 14 |
abdomen element | 6.74e-10 | 54 |
abdominal segment element | 6.74e-10 | 54 |
nephron tubule epithelium | 6.17e-09 | 10 |
urinary system structure | 6.85e-09 | 47 |
chorion | 8.83e-09 | 7 |
epithelium of foregut-midgut junction | 9.19e-09 | 25 |
anatomical boundary | 9.19e-09 | 25 |
hepatobiliary system | 9.19e-09 | 25 |
Showing 1 to 10 of 30 entries
Ontology term | p-value | n |
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carcinoma | 6.69e-14 | 106 |
adenocarcinoma | 2.76e-12 | 25 |
thoracic cancer | 5.13e-11 | 4 |
breast cancer | 5.13e-11 | 4 |
cell type cancer | 5.04e-10 | 143 |
squamous cell carcinoma | 2.70e-08 | 14 |
Showing 1 to 6 of 6 entries