FFCP PHASE2:Hg19::chr2:234184368..234184381,+
From FANTOM5_SSTAR
Jump to: navigation, search
| Short description: | p1@SCARNA5 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_SCARNA5_5end |
| Coexpression cluster: | C673_CD4_Neutrophils_blood_CD8_skeletal_parietal_temporal |
| Association with transcript: | 0bp_to_ENST00000516201, NR_003008, uc002vue.1_5end |
| EntrezGene: | SCARNA5 |
| HGNC: | 32561 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@SCARNA5 |
|---|
0
50
100
150
200
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| mature alpha-beta T cell | 2.39e-12 | 18 |
| alpha-beta T cell | 2.39e-12 | 18 |
| immature T cell | 2.39e-12 | 18 |
| mature T cell | 2.39e-12 | 18 |
| immature alpha-beta T cell | 2.39e-12 | 18 |
| lymphoid lineage restricted progenitor cell | 1.26e-09 | 52 |
| lymphocyte | 2.91e-09 | 53 |
| common lymphoid progenitor | 2.91e-09 | 53 |
| CD8-positive, alpha-beta T cell | 5.49e-09 | 11 |
| T cell | 3.30e-08 | 25 |
Showing 1 to 10 of 12 entries
| Ontology term | p-value | n |
|---|---|---|
| adult organism | 6.64e-25 | 114 |
| neural tube | 2.25e-13 | 56 |
| neural rod | 2.25e-13 | 56 |
| future spinal cord | 2.25e-13 | 56 |
| neural keel | 2.25e-13 | 56 |
| brain grey matter | 4.15e-12 | 34 |
| gray matter | 4.15e-12 | 34 |
| regional part of nervous system | 1.08e-11 | 53 |
| regional part of brain | 1.08e-11 | 53 |
| regional part of telencephalon | 8.47e-11 | 32 |
Showing 1 to 10 of 32 entries
