FFCP PHASE2:Hg19::chr4:77356248..77356295,+
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| Short description: | p5@SHROOM3 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_5_at_SHROOM3_5end |
| Coexpression cluster: | C2796_Astrocyte_signet_Ciliary_small_Neural_anaplastic_Lens |
| Association with transcript: | 0bp_to_ENST00000296043, NM_020859, uc011cbx.1_5end |
| EntrezGene: | SHROOM3 |
| HGNC: | 30422 |
| UniProt: | Q8TF72B3KY47 |
| Genome view: | ZENBU |
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CAGE Expression
| Sample | p5@SHROOM3 |
|---|
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25
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| astrocyte of the cerebral cortex | 5.46e-11 | 3 |
| ciliated cell | 1.04e-10 | 3 |
| ciliated epithelial cell | 1.04e-10 | 3 |
| multi-ciliated epithelial cell | 1.04e-10 | 3 |
| non-pigmented ciliary epithelial cell | 1.04e-10 | 3 |
| retinal pigment epithelial cell | 1.07e-10 | 3 |
| neurectodermal cell | 1.39e-10 | 59 |
| neural cell | 8.81e-10 | 25 |
| neuronal stem cell | 1.50e-09 | 8 |
| visual pigment cell | 4.16e-08 | 4 |
Showing 1 to 10 of 15 entries
| Ontology term | p-value | n |
|---|---|---|
| pigment epithelium of eye | 1.40e-22 | 11 |
| eye | 4.04e-16 | 21 |
| visual system | 4.04e-16 | 21 |
| face | 2.53e-15 | 22 |
| camera-type eye | 3.43e-14 | 20 |
| simple eye | 3.43e-14 | 20 |
| immature eye | 3.43e-14 | 20 |
| ocular region | 3.43e-14 | 20 |
| eyeball of camera-type eye | 3.43e-14 | 20 |
| optic cup | 3.43e-14 | 20 |
Showing 1 to 10 of 41 entries
| Ontology term | p-value | n |
|---|---|---|
| signet ring cell adenocarcinoma | 7.88e-08 | 2 |
| adenocarcinoma | 6.65e-07 | 25 |
Showing 1 to 2 of 2 entries
