FFCP PHASE1:Hg19::chr3:133670133..133670144,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_at_chr3:133670133..133670144,- | |||
|id=chr3:133670133..133670144,- | |||
|ontology_enrichment_celltype=CL:0002541!1.66e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002541;6.27e-67;3!CL:0000349;3.09e-11;19!CL:0000346;1.35e-08;3!CL:1000428;1.35e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,7.85e-67,3;CL:0000349,3.19e-11,19;CL:0000346,1.40e-08,3;CL:1000428,1.40e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0005754;1.67e-23;1!UBERON:0006242;4.59e-23;1!UBERON:0007297;1.85e-12;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.32e-13!115;UBERON:0000478!4.64e-08!24;UBERON:0000476!1.66e-07!3;UBERON:0000920!1.66e-07!3;UBERON:0003124!2.06e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;6.27e-67;3!UBERON:0000920;6.27e-67;3!UBERON:0006947;2.30e-30;3!UBERON:0004054;2.30e-30;3!UBERON:0000998;1.67e-23;1!UBERON:0006868;1.67e-23;1!UBERON:0001000;2.62e-23;1!UBERON:0005352;2.62e-23;1!UBERON:0000478;3.80e-23;24!UBERON:0005904;4.60e-23;4!UBERON:0005631;1.05e-20;10!UBERON:0000158;1.05e-20;10!UBERON:0000058;7.74e-10;10!UBERON:0002331;1.05e-09;10!UBERON:0003135;5.00e-09;11!UBERON:0002110;1.35e-08;3!UBERON:0000412;1.35e-08;3!UBERON:0001992;1.35e-08;3!UBERON:0000178;9.09e-07;15!UBERON:0000179;9.09e-07;15!UBERON:0000463;9.09e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,7.85e-67,3;UBERON:0006947,1.98e-30,3;UBERON:0004054,1.98e-30,3;UBERON:0003124,3.50e-29,7;UBERON:0000998,1.34e-23,1;UBERON:0006868,1.34e-23,1;UBERON:0001000,2.62e-23,1;UBERON:0005352,2.62e-23,1;UBERON:0000478,3.63e-23,24;UBERON:0005904,4.11e-23,4;UBERON:0005631,5.52e-15,14;UBERON:0000158,5.52e-15,14;UBERON:0002331,9.65e-10,10;UBERON:0000358,9.65e-10,10;UBERON:0000307,9.65e-10,10;UBERON:0000091,9.65e-10,10;UBERON:0000087,9.65e-10,10;UBERON:0007010,9.65e-10,10;UBERON:0007806,9.65e-10,10;UBERON:0008780,9.65e-10,10;UBERON:0005728,9.65e-10,10;UBERON:0003135,4.80e-09,11;UBERON:0000412,1.40e-08,3;UBERON:0001992,1.40e-08,3;UBERON:0002110,1.51e-08,3;UBERON:0006242,1.51e-08,3;UBERON:0000178,8.58e-07,15;UBERON:0000179,8.58e-07,15;UBERON:0000463,8.58e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0.697801167972428,0,0.263766978228454,0,0,0,0,0,0,0.61560529038394,0,0.313454721478088,0,0,0.125542639594803,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0.404132016209064,0.326923806226917,0.454072282934794,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0.358779271377724,0.213557388818567,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0.10075209822764,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0.43596006883328,0.1466765716419,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0,0,0.391602314925481,0.343143423810856,0,0,0,0,0,0.907170879989041,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.47748896947538,0,0,0,0.140669416410513,0,0,0,0.597743964753209,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174919999992391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.384751292518985,0,0,0,0.217294743844016,3.50901275705111,3.20591576906518,10.1276607443541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,1.60633120630454,1.67075119208729,0,0,0,0,0,0,2.36750641709634,0,0,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.0633107959558787,0,0.160317640503067,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0.717873024576814,0.798716001995964,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.315222829196793,0.157363764404994,0,0,0.191915197319445,0,0.662091970365432,0,0,0,0,0,0,0,0.339936274560377,0,0,0,0,0,0,0.427149650270779,0.628817220398664,0.828478110694391,0.992332043623902,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40341013740704,0.781514011233092,0,0.327543835020193,0,0.0675375846183947,0,0,0,0,0,0,0,0.255524855279191,0,0,0.606965604236632,0,0.177404740325278,0,0,0,0,0,0,0.470958557103084,0,0,0,0,0,0.571812353413251,0,0,0,0,0,0,0.691259661814092,0.430227358820278,0,0,3.81048345171836,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0.11294608203896,0,0,0.0771741581079447,0.437119121007915,0,0.245148321753905,0,0.196308467114945,0,0.4226557275834,0,0.0939839179798536,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.0620747142958579,0,0.0636471582781649,0.404234377916439,0.435433495793923,0,0.26940821205835,0.430333232356058,0.332660356546013,0,0,0,0,0,0.244482888365733,0,0,0.201273793591026,0 | |||
|short_description=p@chr3:133670133..133670144,- | |||
}} | |||
Revision as of 21:29, 21 January 2014
| Short description: | p@chr3:133670133..133670144, - |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | No |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr3:133670133..133670144, - |
| Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| chorionic membrane mesenchymal stem cell | 7.85e-67 | 3 |
| extraembryonic cell | 3.19e-11 | 19 |
| hair follicle dermal papilla cell | 1.40e-08 | 3 |
| stem cell of epidermis | 1.40e-08 | 3 |
| Ontology term | p-value | n |
|---|---|---|
| egg chorion | 7.85e-67 | 3 |
| male genital duct | 1.98e-30 | 3 |
| internal male genitalia | 1.98e-30 | 3 |
| chorion | 3.50e-29 | 7 |
| seminal vesicle | 1.34e-23 | 1 |
| seminal fluid secreting gland | 1.34e-23 | 1 |
| vas deferens | 2.62e-23 | 1 |
| spermatic cord | 2.62e-23 | 1 |
| extraembryonic structure | 3.63e-23 | 24 |
| duct of male reproductive system | 4.11e-23 | 4 |
| extraembryonic membrane | 5.52e-15 | 14 |
| membranous layer | 5.52e-15 | 14 |
| umbilical cord | 9.65e-10 | 10 |
| blastocyst | 9.65e-10 | 10 |
| blastula | 9.65e-10 | 10 |
| bilaminar disc | 9.65e-10 | 10 |
| inner cell mass | 9.65e-10 | 10 |
| cleaving embryo | 9.65e-10 | 10 |
| connecting stalk | 9.65e-10 | 10 |
| inner cell mass derived epiblast | 9.65e-10 | 10 |
| extraembryonic mesoderm | 9.65e-10 | 10 |
| male reproductive organ | 4.80e-09 | 11 |
| dermal papilla | 1.40e-08 | 3 |
| papillary layer of dermis | 1.40e-08 | 3 |
| gallbladder | 1.51e-08 | 3 |
| gall bladder primordium | 1.51e-08 | 3 |
| blood | 8.58e-07 | 15 |
| haemolymphatic fluid | 8.58e-07 | 15 |
| organism substance | 8.58e-07 | 15 |
