FFCP PHASE1:Mm9::chr7:52960663..52960677,+: Difference between revisions
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|id=chr7:52960663..52960677,+ | |id=chr7:52960663..52960677,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002453,4.26e-12,8;CL:0000333,1.40e-11,10;CL:0000095,1.40e-11,10;CL:0000243,1.40e-11,10;CL:0000123,1.40e-11,10;CL:0000125,1.40e-11,10;CL:0000030,1.40e-11,10;CL:0000339,1.40e-11,10;CL:0000128,1.06e-08,6;CL:0000126,1.06e-08,6;CL:0000127,1.06e-08,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!4.62e-11!50;UBERON:0006238!4.62e-11!50;UBERON:0002616!1.35e-10!49;UBERON:0000033!6.16e-10!63;UBERON:0007023!3.07e-09!51;UBERON:0004111!9.75e-09!122;UBERON:0001049!2.73e-08!52;UBERON:0005068!2.73e-08!52;UBERON:0006241!2.73e-08!52;UBERON:0007135!2.73e-08!52;UBERON:0000073!4.92e-08!75;UBERON:0001016!4.92e-08!75;UBERON:0000025!1.23e-07!114;UBERON:0001017!1.39e-07!73;UBERON:0005743!1.39e-07!73;UBERON:0004121!2.32e-07!102;UBERON:0000924!2.32e-07!102;UBERON:0006601!2.32e-07!102 | |ontology_enrichment_uberon=UBERON:0000955!4.62e-11!50;UBERON:0006238!4.62e-11!50;UBERON:0002616!1.35e-10!49;UBERON:0000033!6.16e-10!63;UBERON:0007023!3.07e-09!51;UBERON:0004111!9.75e-09!122;UBERON:0001049!2.73e-08!52;UBERON:0005068!2.73e-08!52;UBERON:0006241!2.73e-08!52;UBERON:0007135!2.73e-08!52;UBERON:0000073!4.92e-08!75;UBERON:0001016!4.92e-08!75;UBERON:0000025!1.23e-07!114;UBERON:0001017!1.39e-07!73;UBERON:0005743!1.39e-07!73;UBERON:0004121!2.32e-07!102;UBERON:0000924!2.32e-07!102;UBERON:0006601!2.32e-07!102 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.17e-12,51;UBERON:0001016,7.34e-12,75;UBERON:0001017,1.98e-11,73;UBERON:0004121,2.28e-10,95;UBERON:0000924,2.28e-10,95;UBERON:0006601,2.28e-10,95;UBERON:0000073,3.58e-10,54;UBERON:0000955,1.39e-09,47;UBERON:0006238,1.39e-09,47;UBERON:0002616,7.47e-09,46;UBERON:0001049,3.85e-08,52;UBERON:0005068,3.85e-08,52;UBERON:0006241,3.85e-08,52;UBERON:0007135,3.85e-08,52;UBERON:0003528,6.50e-08,29;UBERON:0002791,6.50e-08,29;UBERON:0001893,6.50e-08,29;UBERON:0003080,1.81e-07,40;UBERON:0002950,3.28e-07,4;UBERON:0001891,3.28e-07,4;UBERON:0009616,3.28e-07,4;UBERON:0010286,3.28e-07,4;UBERON:0002780,9.30e-07,39;UBERON:0001890,9.30e-07,39;UBERON:0006240,9.30e-07,39 | |||
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| ||
|short_description=p6@Dbp | |short_description=p6@Dbp | ||
}} | }} |
Revision as of 15:01, 13 November 2012
Short description: | p6@Dbp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Dbp_5end |
Coexpression cluster: | MCL_coexpression_mm9:3628 |
Association with transcript: | 46bp_to_NM_016974, uc009gws.2_5end |
EntrezGene: | Dbp |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 4.26e-12 | 8 |
migratory neural crest cell | 1.40e-11 | 10 |
neuron associated cell | 1.40e-11 | 10 |
glial cell (sensu Vertebrata) | 1.40e-11 | 10 |
neuron associated cell (sensu Vertebrata) | 1.40e-11 | 10 |
glial cell | 1.40e-11 | 10 |
glioblast | 1.40e-11 | 10 |
glioblast (sensu Vertebrata) | 1.40e-11 | 10 |
oligodendrocyte | 1.06e-08 | 6 |
macroglial cell | 1.06e-08 | 6 |
astrocyte | 1.06e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.17e-12 | 51 |
nervous system | 7.34e-12 | 75 |
central nervous system | 1.98e-11 | 73 |
ectoderm-derived structure | 2.28e-10 | 95 |
ectoderm | 2.28e-10 | 95 |
presumptive ectoderm | 2.28e-10 | 95 |
regional part of nervous system | 3.58e-10 | 54 |
brain | 1.39e-09 | 47 |
future brain | 1.39e-09 | 47 |
regional part of brain | 7.47e-09 | 46 |
neural tube | 3.85e-08 | 52 |
neural rod | 3.85e-08 | 52 |
future spinal cord | 3.85e-08 | 52 |
neural keel | 3.85e-08 | 52 |
brain grey matter | 6.50e-08 | 29 |
regional part of telencephalon | 6.50e-08 | 29 |
telencephalon | 6.50e-08 | 29 |
anterior neural tube | 1.81e-07 | 40 |
regional part of midbrain | 3.28e-07 | 4 |
midbrain | 3.28e-07 | 4 |
presumptive midbrain | 3.28e-07 | 4 |
midbrain neural tube | 3.28e-07 | 4 |
regional part of forebrain | 9.30e-07 | 39 |
forebrain | 9.30e-07 | 39 |
future forebrain | 9.30e-07 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.