FFCP PHASE1:Mm9::chr5:137384000..137384044,+: Difference between revisions
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|id=chr5:137384000..137384044,+ | |id=chr5:137384000..137384044,+ | ||
|ontology_enrichment_celltype=CL:0000221!1.55e-13!44;CL:0000133!1.55e-13!44;CL:0002319!3.11e-13!43;CL:0000055!1.67e-12!50;CL:0002321!2.12e-11!70;CL:0000220!2.12e-11!70;CL:0000117!3.81e-09!23;CL:0000337!3.81e-09!23;CL:0000393!1.22e-08!39;CL:0000211!1.22e-08!39;CL:0000540!1.62e-08!33;CL:0000047!1.62e-08!33;CL:0000031!1.62e-08!33;CL:0000404!1.62e-08!33 | |ontology_enrichment_celltype=CL:0000221!1.55e-13!44;CL:0000133!1.55e-13!44;CL:0002319!3.11e-13!43;CL:0000055!1.67e-12!50;CL:0002321!2.12e-11!70;CL:0000220!2.12e-11!70;CL:0000117!3.81e-09!23;CL:0000337!3.81e-09!23;CL:0000393!1.22e-08!39;CL:0000211!1.22e-08!39;CL:0000540!1.62e-08!33;CL:0000047!1.62e-08!33;CL:0000031!1.62e-08!33;CL:0000404!1.62e-08!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.55e-13,44;CL:0000133,1.55e-13,44;CL:0002319,3.11e-13,43;CL:0002321,2.12e-11,70;CL:0000117,3.81e-09,23;CL:0000337,3.81e-09,23;CL:0000393,1.22e-08,39;CL:0000211,1.22e-08,39;CL:0000540,1.62e-08,33;CL:0000047,1.62e-08,33;CL:0000031,1.62e-08,33;CL:0000404,1.62e-08,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.03e-28!75;UBERON:0001016!2.03e-28!75;UBERON:0001017!3.81e-28!73;UBERON:0005743!3.81e-28!73;UBERON:0000955!6.19e-23!50;UBERON:0006238!6.19e-23!50;UBERON:0001049!8.59e-23!52;UBERON:0005068!8.59e-23!52;UBERON:0006241!8.59e-23!52;UBERON:0007135!8.59e-23!52;UBERON:0002616!1.66e-22!49;UBERON:0000033!1.95e-22!63;UBERON:0004121!3.78e-22!102;UBERON:0000924!3.78e-22!102;UBERON:0006601!3.78e-22!102;UBERON:0002346!1.21e-20!71;UBERON:0003075!1.21e-20!71;UBERON:0007284!1.21e-20!71;UBERON:0003080!1.24e-17!40;UBERON:0002780!4.46e-17!39;UBERON:0001890!4.46e-17!39;UBERON:0006240!4.46e-17!39;UBERON:0003056!1.05e-16!49;UBERON:0002020!1.02e-14!34;UBERON:0002791!2.60e-13!29;UBERON:0003528!2.60e-13!29;UBERON:0001893!2.60e-13!29;UBERON:0000956!9.22e-10!21;UBERON:0001869!9.22e-10!21;UBERON:0000203!9.22e-10!21;UBERON:0002619!9.71e-09!17;UBERON:0007811!1.17e-08!86;UBERON:0000153!2.69e-07!94 | |ontology_enrichment_uberon=UBERON:0000073!2.03e-28!75;UBERON:0001016!2.03e-28!75;UBERON:0001017!3.81e-28!73;UBERON:0005743!3.81e-28!73;UBERON:0000955!6.19e-23!50;UBERON:0006238!6.19e-23!50;UBERON:0001049!8.59e-23!52;UBERON:0005068!8.59e-23!52;UBERON:0006241!8.59e-23!52;UBERON:0007135!8.59e-23!52;UBERON:0002616!1.66e-22!49;UBERON:0000033!1.95e-22!63;UBERON:0004121!3.78e-22!102;UBERON:0000924!3.78e-22!102;UBERON:0006601!3.78e-22!102;UBERON:0002346!1.21e-20!71;UBERON:0003075!1.21e-20!71;UBERON:0007284!1.21e-20!71;UBERON:0003080!1.24e-17!40;UBERON:0002780!4.46e-17!39;UBERON:0001890!4.46e-17!39;UBERON:0006240!4.46e-17!39;UBERON:0003056!1.05e-16!49;UBERON:0002020!1.02e-14!34;UBERON:0002791!2.60e-13!29;UBERON:0003528!2.60e-13!29;UBERON:0001893!2.60e-13!29;UBERON:0000956!9.22e-10!21;UBERON:0001869!9.22e-10!21;UBERON:0000203!9.22e-10!21;UBERON:0002619!9.71e-09!17;UBERON:0007811!1.17e-08!86;UBERON:0000153!2.69e-07!94 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.03e-28,75;UBERON:0001017,3.80e-28,73;UBERON:0000073,4.05e-24,54;UBERON:0001049,8.58e-23,52;UBERON:0005068,8.58e-23,52;UBERON:0006241,8.58e-23,52;UBERON:0007135,8.58e-23,52;UBERON:0004121,1.01e-22,95;UBERON:0000924,1.01e-22,95;UBERON:0006601,1.01e-22,95;UBERON:0002346,8.63e-22,64;UBERON:0003075,8.63e-22,64;UBERON:0007284,8.63e-22,64;UBERON:0000955,4.89e-21,47;UBERON:0006238,4.89e-21,47;UBERON:0002616,1.28e-20,46;UBERON:0010371,1.07e-17,73;UBERON:0003080,1.24e-17,40;UBERON:0002780,4.45e-17,39;UBERON:0001890,4.45e-17,39;UBERON:0006240,4.45e-17,39;UBERON:0003056,1.05e-16,49;UBERON:0002020,1.01e-14,34;UBERON:0003528,2.60e-13,29;UBERON:0002791,2.60e-13,29;UBERON:0001893,2.60e-13,29;UBERON:0010314,3.14e-13,92;UBERON:0000956,9.21e-10,21;UBERON:0001869,9.21e-10,21;UBERON:0000203,9.21e-10,21;UBERON:0002619,9.71e-09,17 | |||
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| ||
|short_description=p1@Rabl5 | |short_description=p1@Rabl5 | ||
}} | }} |
Revision as of 12:36, 14 November 2012
Short description: | p1@Rabl5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rabl5_5end |
Coexpression cluster: | MCL_coexpression_mm9:346 |
Association with transcript: | 0bp_to_ENSMUST00000008131, NM_026073, uc009abc.1_5end |
EntrezGene: | Rabl5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.55e-13 | 44 |
neurectodermal cell | 1.55e-13 | 44 |
neural cell | 3.11e-13 | 43 |
embryonic cell | 2.12e-11 | 70 |
CNS neuron (sensu Vertebrata) | 3.81e-09 | 23 |
neuroblast (sensu Vertebrata) | 3.81e-09 | 23 |
electrically responsive cell | 1.22e-08 | 39 |
electrically active cell | 1.22e-08 | 39 |
neuron | 1.62e-08 | 33 |
neuronal stem cell | 1.62e-08 | 33 |
neuroblast | 1.62e-08 | 33 |
electrically signaling cell | 1.62e-08 | 33 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.03e-28 | 75 |
central nervous system | 3.80e-28 | 73 |
regional part of nervous system | 4.05e-24 | 54 |
neural tube | 8.58e-23 | 52 |
neural rod | 8.58e-23 | 52 |
future spinal cord | 8.58e-23 | 52 |
neural keel | 8.58e-23 | 52 |
ectoderm-derived structure | 1.01e-22 | 95 |
ectoderm | 1.01e-22 | 95 |
presumptive ectoderm | 1.01e-22 | 95 |
neurectoderm | 8.63e-22 | 64 |
neural plate | 8.63e-22 | 64 |
presumptive neural plate | 8.63e-22 | 64 |
brain | 4.89e-21 | 47 |
future brain | 4.89e-21 | 47 |
regional part of brain | 1.28e-20 | 46 |
ecto-epithelium | 1.07e-17 | 73 |
anterior neural tube | 1.24e-17 | 40 |
regional part of forebrain | 4.45e-17 | 39 |
forebrain | 4.45e-17 | 39 |
future forebrain | 4.45e-17 | 39 |
pre-chordal neural plate | 1.05e-16 | 49 |
gray matter | 1.01e-14 | 34 |
brain grey matter | 2.60e-13 | 29 |
regional part of telencephalon | 2.60e-13 | 29 |
telencephalon | 2.60e-13 | 29 |
structure with developmental contribution from neural crest | 3.14e-13 | 92 |
cerebral cortex | 9.21e-10 | 21 |
cerebral hemisphere | 9.21e-10 | 21 |
pallium | 9.21e-10 | 21 |
regional part of cerebral cortex | 9.71e-09 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.