FFCP PHASE1:Mm9::chr17:34169016..34169068,+: Difference between revisions
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|id=chr17:34169016..34169068,+ | |id=chr17:34169016..34169068,+ | ||
|ontology_enrichment_celltype=CL:0000117!7.33e-14!23;CL:0000337!7.33e-14!23;CL:0000540!5.61e-12!33;CL:0000047!5.61e-12!33;CL:0000031!5.61e-12!33;CL:0000404!5.61e-12!33;CL:0000221!6.61e-12!44;CL:0000133!6.61e-12!44;CL:0002319!1.55e-11!43;CL:0000393!4.77e-08!39;CL:0000211!4.77e-08!39;CL:0000055!7.95e-08!50;CL:0002321!5.26e-07!70;CL:0000220!5.26e-07!70 | |ontology_enrichment_celltype=CL:0000117!7.33e-14!23;CL:0000337!7.33e-14!23;CL:0000540!5.61e-12!33;CL:0000047!5.61e-12!33;CL:0000031!5.61e-12!33;CL:0000404!5.61e-12!33;CL:0000221!6.61e-12!44;CL:0000133!6.61e-12!44;CL:0002319!1.55e-11!43;CL:0000393!4.77e-08!39;CL:0000211!4.77e-08!39;CL:0000055!7.95e-08!50;CL:0002321!5.26e-07!70;CL:0000220!5.26e-07!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.33e-14,23;CL:0000337,7.33e-14,23;CL:0000540,5.61e-12,33;CL:0000047,5.61e-12,33;CL:0000031,5.61e-12,33;CL:0000404,5.61e-12,33;CL:0000221,6.61e-12,44;CL:0000133,6.61e-12,44;CL:0002319,1.55e-11,43;CL:0000393,4.77e-08,39;CL:0000211,4.77e-08,39;CL:0002321,5.26e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.48e-25!73;UBERON:0005743!2.48e-25!73;UBERON:0000073!1.09e-23!75;UBERON:0001016!1.09e-23!75;UBERON:0000033!1.84e-21!63;UBERON:0001049!1.11e-20!52;UBERON:0005068!1.11e-20!52;UBERON:0006241!1.11e-20!52;UBERON:0007135!1.11e-20!52;UBERON:0000955!7.19e-20!50;UBERON:0006238!7.19e-20!50;UBERON:0002616!1.45e-19!49;UBERON:0004121!3.24e-18!102;UBERON:0000924!3.24e-18!102;UBERON:0006601!3.24e-18!102;UBERON:0002346!7.20e-18!71;UBERON:0003075!7.20e-18!71;UBERON:0007284!7.20e-18!71;UBERON:0003056!5.38e-17!49;UBERON:0002020!1.72e-15!34;UBERON:0003080!3.11e-15!40;UBERON:0002780!1.03e-14!39;UBERON:0001890!1.03e-14!39;UBERON:0006240!1.03e-14!39;UBERON:0007811!1.90e-14!86;UBERON:0000153!8.47e-14!94;UBERON:0002791!1.29e-12!29;UBERON:0003528!1.29e-12!29;UBERON:0001893!1.29e-12!29;UBERON:0000956!4.95e-08!21;UBERON:0001869!4.95e-08!21;UBERON:0000203!4.95e-08!21 | |ontology_enrichment_uberon=UBERON:0001017!2.48e-25!73;UBERON:0005743!2.48e-25!73;UBERON:0000073!1.09e-23!75;UBERON:0001016!1.09e-23!75;UBERON:0000033!1.84e-21!63;UBERON:0001049!1.11e-20!52;UBERON:0005068!1.11e-20!52;UBERON:0006241!1.11e-20!52;UBERON:0007135!1.11e-20!52;UBERON:0000955!7.19e-20!50;UBERON:0006238!7.19e-20!50;UBERON:0002616!1.45e-19!49;UBERON:0004121!3.24e-18!102;UBERON:0000924!3.24e-18!102;UBERON:0006601!3.24e-18!102;UBERON:0002346!7.20e-18!71;UBERON:0003075!7.20e-18!71;UBERON:0007284!7.20e-18!71;UBERON:0003056!5.38e-17!49;UBERON:0002020!1.72e-15!34;UBERON:0003080!3.11e-15!40;UBERON:0002780!1.03e-14!39;UBERON:0001890!1.03e-14!39;UBERON:0006240!1.03e-14!39;UBERON:0007811!1.90e-14!86;UBERON:0000153!8.47e-14!94;UBERON:0002791!1.29e-12!29;UBERON:0003528!1.29e-12!29;UBERON:0001893!1.29e-12!29;UBERON:0000956!4.95e-08!21;UBERON:0001869!4.95e-08!21;UBERON:0000203!4.95e-08!21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.48e-25,73;UBERON:0001016,1.09e-23,75;UBERON:0000073,1.17e-22,54;UBERON:0002346,2.30e-21,64;UBERON:0003075,2.30e-21,64;UBERON:0007284,2.30e-21,64;UBERON:0004121,8.14e-21,95;UBERON:0000924,8.14e-21,95;UBERON:0006601,8.14e-21,95;UBERON:0001049,1.11e-20,52;UBERON:0005068,1.11e-20,52;UBERON:0006241,1.11e-20,52;UBERON:0007135,1.11e-20,52;UBERON:0010371,2.74e-18,73;UBERON:0000955,8.63e-18,47;UBERON:0006238,8.63e-18,47;UBERON:0002616,1.71e-17,46;UBERON:0003056,5.38e-17,49;UBERON:0002020,1.72e-15,34;UBERON:0003080,3.11e-15,40;UBERON:0002780,1.03e-14,39;UBERON:0001890,1.03e-14,39;UBERON:0006240,1.03e-14,39;UBERON:0003528,1.29e-12,29;UBERON:0002791,1.29e-12,29;UBERON:0001893,1.29e-12,29;UBERON:0010314,1.74e-12,92;UBERON:0000956,4.95e-08,21;UBERON:0001869,4.95e-08,21;UBERON:0000203,4.95e-08,21 | |||
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| ||
|short_description=p2@Rxrb | |short_description=p2@Rxrb | ||
}} | }} |
Revision as of 21:24, 14 November 2012
Short description: | p2@Rxrb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rxrb_5end |
Coexpression cluster: | NA |
Association with transcript: | -59bp_to_ENSMUST00000174299_5end |
EntrezGene: | Rxrb |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.33e-14 | 23 |
neuroblast (sensu Vertebrata) | 7.33e-14 | 23 |
neuron | 5.61e-12 | 33 |
neuronal stem cell | 5.61e-12 | 33 |
neuroblast | 5.61e-12 | 33 |
electrically signaling cell | 5.61e-12 | 33 |
ectodermal cell | 6.61e-12 | 44 |
neurectodermal cell | 6.61e-12 | 44 |
neural cell | 1.55e-11 | 43 |
electrically responsive cell | 4.77e-08 | 39 |
electrically active cell | 4.77e-08 | 39 |
embryonic cell | 5.26e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.48e-25 | 73 |
nervous system | 1.09e-23 | 75 |
regional part of nervous system | 1.17e-22 | 54 |
neurectoderm | 2.30e-21 | 64 |
neural plate | 2.30e-21 | 64 |
presumptive neural plate | 2.30e-21 | 64 |
ectoderm-derived structure | 8.14e-21 | 95 |
ectoderm | 8.14e-21 | 95 |
presumptive ectoderm | 8.14e-21 | 95 |
neural tube | 1.11e-20 | 52 |
neural rod | 1.11e-20 | 52 |
future spinal cord | 1.11e-20 | 52 |
neural keel | 1.11e-20 | 52 |
ecto-epithelium | 2.74e-18 | 73 |
brain | 8.63e-18 | 47 |
future brain | 8.63e-18 | 47 |
regional part of brain | 1.71e-17 | 46 |
pre-chordal neural plate | 5.38e-17 | 49 |
gray matter | 1.72e-15 | 34 |
anterior neural tube | 3.11e-15 | 40 |
regional part of forebrain | 1.03e-14 | 39 |
forebrain | 1.03e-14 | 39 |
future forebrain | 1.03e-14 | 39 |
brain grey matter | 1.29e-12 | 29 |
regional part of telencephalon | 1.29e-12 | 29 |
telencephalon | 1.29e-12 | 29 |
structure with developmental contribution from neural crest | 1.74e-12 | 92 |
cerebral cortex | 4.95e-08 | 21 |
cerebral hemisphere | 4.95e-08 | 21 |
pallium | 4.95e-08 | 21 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.