FFCP PHASE1:Mm9::chr9:28728585..28728593,+: Difference between revisions
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|id=chr9:28728585..28728593,+ | |id=chr9:28728585..28728593,+ | ||
|ontology_enrichment_celltype=CL:0000117!9.88e-11!23;CL:0000337!9.88e-11!23;CL:0002614!2.08e-09!3;CL:0000540!6.10e-07!33;CL:0000047!6.10e-07!33;CL:0000031!6.10e-07!33;CL:0000404!6.10e-07!33 | |ontology_enrichment_celltype=CL:0000117!9.88e-11!23;CL:0000337!9.88e-11!23;CL:0002614!2.08e-09!3;CL:0000540!6.10e-07!33;CL:0000047!6.10e-07!33;CL:0000031!6.10e-07!33;CL:0000404!6.10e-07!33 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!1.20e-31!34;UBERON:0002021!1.62e-30!10;UBERON:0000411!1.62e-30!10;UBERON:0001950!1.62e-30!10;UBERON:0002791!3.23e-30!29;UBERON:0003528!3.23e-30!29;UBERON:0001893!3.23e-30!29;UBERON:0000956!2.42e-22!21;UBERON:0001869!2.42e-22!21;UBERON:0000203!2.42e-22!21;UBERON:0002780!1.84e-21!39;UBERON:0001890!1.84e-21!39;UBERON:0006240!1.84e-21!39;UBERON:0003080!7.96e-21!40;UBERON:0002616!1.94e-20!49;UBERON:0002619!1.97e-20!17;UBERON:0000955!6.08e-20!50;UBERON:0006238!6.08e-20!50;UBERON:0001049!3.39e-19!52;UBERON:0005068!3.39e-19!52;UBERON:0006241!3.39e-19!52;UBERON:0007135!3.39e-19!52;UBERON:0001017!3.19e-17!73;UBERON:0005743!3.19e-17!73;UBERON:0000073!1.24e-16!75;UBERON:0001016!1.24e-16!75;UBERON:0003056!2.81e-16!49;UBERON:0000033!6.17e-15!63;UBERON:0002346!6.72e-13!71;UBERON:0003075!6.72e-13!71;UBERON:0007284!6.72e-13!71;UBERON:0004121!6.05e-11!102;UBERON:0000924!6.05e-11!102;UBERON:0006601!6.05e-11!102;UBERON:0007811!8.61e-10!86;UBERON:0000153!1.07e-09!94;UBERON:0002038!2.08e-09!3;UBERON:0002308!2.08e-09!3;UBERON:0009663!2.08e-09!3;UBERON:0009661!2.08e-09!3;UBERON:0006331!2.08e-09!3;UBERON:0000125!2.08e-09!3;UBERON:0002420!7.74e-09!8;UBERON:0007245!7.74e-09!8;UBERON:0010009!7.74e-09!8;UBERON:0010011!7.74e-09!8;UBERON:0000454!7.74e-09!8;UBERON:0000025!2.78e-07!114;UBERON:0002950!3.72e-07!4;UBERON:0001891!3.72e-07!4;UBERON:0009616!3.72e-07!4;UBERON:0000064!4.86e-07!99 | |ontology_enrichment_uberon=UBERON:0002020!1.20e-31!34;UBERON:0002021!1.62e-30!10;UBERON:0000411!1.62e-30!10;UBERON:0001950!1.62e-30!10;UBERON:0002791!3.23e-30!29;UBERON:0003528!3.23e-30!29;UBERON:0001893!3.23e-30!29;UBERON:0000956!2.42e-22!21;UBERON:0001869!2.42e-22!21;UBERON:0000203!2.42e-22!21;UBERON:0002780!1.84e-21!39;UBERON:0001890!1.84e-21!39;UBERON:0006240!1.84e-21!39;UBERON:0003080!7.96e-21!40;UBERON:0002616!1.94e-20!49;UBERON:0002619!1.97e-20!17;UBERON:0000955!6.08e-20!50;UBERON:0006238!6.08e-20!50;UBERON:0001049!3.39e-19!52;UBERON:0005068!3.39e-19!52;UBERON:0006241!3.39e-19!52;UBERON:0007135!3.39e-19!52;UBERON:0001017!3.19e-17!73;UBERON:0005743!3.19e-17!73;UBERON:0000073!1.24e-16!75;UBERON:0001016!1.24e-16!75;UBERON:0003056!2.81e-16!49;UBERON:0000033!6.17e-15!63;UBERON:0002346!6.72e-13!71;UBERON:0003075!6.72e-13!71;UBERON:0007284!6.72e-13!71;UBERON:0004121!6.05e-11!102;UBERON:0000924!6.05e-11!102;UBERON:0006601!6.05e-11!102;UBERON:0007811!8.61e-10!86;UBERON:0000153!1.07e-09!94;UBERON:0002038!2.08e-09!3;UBERON:0002308!2.08e-09!3;UBERON:0009663!2.08e-09!3;UBERON:0009661!2.08e-09!3;UBERON:0006331!2.08e-09!3;UBERON:0000125!2.08e-09!3;UBERON:0002420!7.74e-09!8;UBERON:0007245!7.74e-09!8;UBERON:0010009!7.74e-09!8;UBERON:0010011!7.74e-09!8;UBERON:0000454!7.74e-09!8;UBERON:0000025!2.78e-07!114;UBERON:0002950!3.72e-07!4;UBERON:0001891!3.72e-07!4;UBERON:0009616!3.72e-07!4;UBERON:0000064!4.86e-07!99 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,5.38e-45,10;UBERON:0000411,5.38e-45,10;UBERON:0001950,5.38e-45,10;UBERON:0002619,1.16e-26,17;UBERON:0000956,1.17e-21,21;UBERON:0001869,1.17e-21,21;UBERON:0000203,1.17e-21,21;UBERON:0003528,2.99e-21,29;UBERON:0002791,2.99e-21,29;UBERON:0001893,2.99e-21,29;UBERON:0002020,3.59e-18,34;UBERON:0002780,7.07e-16,39;UBERON:0001890,7.07e-16,39;UBERON:0006240,7.07e-16,39;UBERON:0003080,1.74e-15,40;UBERON:0002616,1.70e-13,46;UBERON:0000955,3.25e-13,47;UBERON:0006238,3.25e-13,47;UBERON:0003056,1.11e-12,49;UBERON:0001049,5.81e-12,52;UBERON:0005068,5.81e-12,52;UBERON:0006241,5.81e-12,52;UBERON:0007135,5.81e-12,52;UBERON:0000073,1.59e-11,54;UBERON:0002346,9.52e-10,64;UBERON:0003075,9.52e-10,64;UBERON:0007284,9.52e-10,64;UBERON:0010371,1.47e-08,73;UBERON:0001017,1.47e-08,73;UBERON:0001016,2.47e-08,75;UBERON:0010314,8.41e-07,92 | |||
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|short_description=p@chr9:28728585..28728593,+ | |short_description=p@chr9:28728585..28728593,+ | ||
}} | }} |
Revision as of 22:00, 14 November 2012
Short description: | p@chr9:28728585..28728593, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:28728585..28728593, + |
Coexpression cluster: | MCL_coexpression_mm9:135 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 5.38e-45 | 10 |
visual cortex | 5.38e-45 | 10 |
neocortex | 5.38e-45 | 10 |
regional part of cerebral cortex | 1.16e-26 | 17 |
cerebral cortex | 1.17e-21 | 21 |
cerebral hemisphere | 1.17e-21 | 21 |
pallium | 1.17e-21 | 21 |
brain grey matter | 2.99e-21 | 29 |
regional part of telencephalon | 2.99e-21 | 29 |
telencephalon | 2.99e-21 | 29 |
gray matter | 3.59e-18 | 34 |
regional part of forebrain | 7.07e-16 | 39 |
forebrain | 7.07e-16 | 39 |
future forebrain | 7.07e-16 | 39 |
anterior neural tube | 1.74e-15 | 40 |
regional part of brain | 1.70e-13 | 46 |
brain | 3.25e-13 | 47 |
future brain | 3.25e-13 | 47 |
pre-chordal neural plate | 1.11e-12 | 49 |
neural tube | 5.81e-12 | 52 |
neural rod | 5.81e-12 | 52 |
future spinal cord | 5.81e-12 | 52 |
neural keel | 5.81e-12 | 52 |
regional part of nervous system | 1.59e-11 | 54 |
neurectoderm | 9.52e-10 | 64 |
neural plate | 9.52e-10 | 64 |
presumptive neural plate | 9.52e-10 | 64 |
ecto-epithelium | 1.47e-08 | 73 |
central nervous system | 1.47e-08 | 73 |
nervous system | 2.47e-08 | 75 |
structure with developmental contribution from neural crest | 8.41e-07 | 92 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.