FFCP PHASE1:Hg19::chr11:91962688..91962692,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000540;1.26e-15;6!CL:0000404;1.26e-15;6 | |ontology_enrichment_celltype_v019=CL:0000540;1.26e-15;6!CL:0000404;1.26e-15;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.51e-15,6;CL:0000031,1.51e-15,6;CL:0000404,1.51e-15,6;CL:0000047,8.30e-12,8 | |||
|ontology_enrichment_development_v019=CL:0000031;1.26e-15;6 | |ontology_enrichment_development_v019=CL:0000031;1.26e-15;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!3.34e-30!34;UBERON:0003528!3.34e-30!34;UBERON:0001049!3.39e-30!57;UBERON:0005068!3.39e-30!57;UBERON:0006241!3.39e-30!57;UBERON:0007135!3.39e-30!57;UBERON:0001893!3.99e-30!34;UBERON:0002791!9.36e-29!33;UBERON:0000073!1.16e-28!94;UBERON:0001016!1.16e-28!94;UBERON:0001017!2.14e-28!82;UBERON:0001869!5.07e-28!32;UBERON:0002780!6.43e-28!41;UBERON:0001890!6.43e-28!41;UBERON:0006240!6.43e-28!41;UBERON:0003080!4.81e-27!42;UBERON:0002616!6.74e-27!59;UBERON:0005743!1.84e-26!86;UBERON:0002346!9.60e-25!90;UBERON:0000955!6.58e-24!69;UBERON:0006238!6.58e-24!69;UBERON:0003075!8.87e-24!86;UBERON:0007284!8.87e-24!86;UBERON:0000956!9.58e-21!25;UBERON:0000203!9.58e-21!25;UBERON:0003056!5.02e-20!61;UBERON:0002619!8.60e-17!22;UBERON:0001950!1.25e-16!20;UBERON:0000924!3.27e-16!173;UBERON:0006601!3.27e-16!173;UBERON:0004121!2.43e-15!169;UBERON:0007023!4.49e-13!115;UBERON:0000033!6.71e-12!123;UBERON:0002308!4.96e-11!9;UBERON:0000125!4.96e-11!9;UBERON:0000153!7.68e-11!129;UBERON:0007811!7.68e-11!129;UBERON:0001872!1.24e-09!5;UBERON:0002420!1.03e-08!9;UBERON:0007245!1.03e-08!9;UBERON:0010009!1.03e-08!9;UBERON:0010011!1.03e-08!9;UBERON:0000454!1.03e-08!9;UBERON:0009663!1.56e-08!7;UBERON:0000369!1.21e-07!4;UBERON:0002435!1.21e-07!4;UBERON:0000204!1.21e-07!4;UBERON:0010082!1.21e-07!4 | |ontology_enrichment_uberon=UBERON:0002020!3.34e-30!34;UBERON:0003528!3.34e-30!34;UBERON:0001049!3.39e-30!57;UBERON:0005068!3.39e-30!57;UBERON:0006241!3.39e-30!57;UBERON:0007135!3.39e-30!57;UBERON:0001893!3.99e-30!34;UBERON:0002791!9.36e-29!33;UBERON:0000073!1.16e-28!94;UBERON:0001016!1.16e-28!94;UBERON:0001017!2.14e-28!82;UBERON:0001869!5.07e-28!32;UBERON:0002780!6.43e-28!41;UBERON:0001890!6.43e-28!41;UBERON:0006240!6.43e-28!41;UBERON:0003080!4.81e-27!42;UBERON:0002616!6.74e-27!59;UBERON:0005743!1.84e-26!86;UBERON:0002346!9.60e-25!90;UBERON:0000955!6.58e-24!69;UBERON:0006238!6.58e-24!69;UBERON:0003075!8.87e-24!86;UBERON:0007284!8.87e-24!86;UBERON:0000956!9.58e-21!25;UBERON:0000203!9.58e-21!25;UBERON:0003056!5.02e-20!61;UBERON:0002619!8.60e-17!22;UBERON:0001950!1.25e-16!20;UBERON:0000924!3.27e-16!173;UBERON:0006601!3.27e-16!173;UBERON:0004121!2.43e-15!169;UBERON:0007023!4.49e-13!115;UBERON:0000033!6.71e-12!123;UBERON:0002308!4.96e-11!9;UBERON:0000125!4.96e-11!9;UBERON:0000153!7.68e-11!129;UBERON:0007811!7.68e-11!129;UBERON:0001872!1.24e-09!5;UBERON:0002420!1.03e-08!9;UBERON:0007245!1.03e-08!9;UBERON:0010009!1.03e-08!9;UBERON:0010011!1.03e-08!9;UBERON:0000454!1.03e-08!9;UBERON:0009663!1.56e-08!7;UBERON:0000369!1.21e-07!4;UBERON:0002435!1.21e-07!4;UBERON:0000204!1.21e-07!4;UBERON:0010082!1.21e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0000956;1.82e-13;25!UBERON:0000203;1.82e-13;25!UBERON:0002791;4.66e-13;32!UBERON:0001869;7.44e-13;32!UBERON:0002780;6.97e-12;41!UBERON:0001890;6.97e-12;41!UBERON:0001950;7.22e-12;20!UBERON:0003528;8.53e-12;34!UBERON:0002020;8.53e-12;34!UBERON:0002619;7.95e-11;22!UBERON:0001893;1.17e-10;34!UBERON:0002021;5.06e-09;5 | |ontology_enrichment_uberon_v019=UBERON:0000956;1.82e-13;25!UBERON:0000203;1.82e-13;25!UBERON:0002791;4.66e-13;32!UBERON:0001869;7.44e-13;32!UBERON:0002780;6.97e-12;41!UBERON:0001890;6.97e-12;41!UBERON:0001950;7.22e-12;20!UBERON:0003528;8.53e-12;34!UBERON:0002020;8.53e-12;34!UBERON:0002619;7.95e-11;22!UBERON:0001893;1.17e-10;34!UBERON:0002021;5.06e-09;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,2.96e-14,41;UBERON:0001890,2.96e-14,41;UBERON:0003080,2.96e-14,41;UBERON:0006240,2.96e-14,41;UBERON:0002791,3.84e-14,32;UBERON:0001869,3.84e-14,32;UBERON:0001016,1.02e-13,89;UBERON:0000956,2.13e-13,25;UBERON:0000203,2.13e-13,25;UBERON:0003528,2.69e-13,34;UBERON:0002020,2.69e-13,34;UBERON:0001893,2.69e-13,34;UBERON:0001017,6.90e-13,81;UBERON:0001950,8.02e-12,20;UBERON:0000073,7.04e-11,53;UBERON:0002616,7.04e-11,53;UBERON:0002619,8.75e-11,22;UBERON:0001049,2.95e-10,56;UBERON:0005068,2.95e-10,56;UBERON:0006241,2.95e-10,56;UBERON:0007135,2.95e-10,56;UBERON:0003056,2.37e-09,61;UBERON:0002021,5.95e-09,5;UBERON:0000955,3.58e-08,68;UBERON:0006238,3.58e-08,68;UBERON:0003075,9.69e-07,82;UBERON:0007284,9.69e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.85870796139317,0.136874425072884,1.12988375635323,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0.32592226663359,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702678285545008,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0.213557388818567,0,0,0,0.515281080091258,0.18611685633159,0.337552664482532,0,0,0,0,0.710019185033229,0,0,0,0,0,0.121973706129595,0,0.348581828608555,0,0.504641701751257,1.82488679537915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46511143709349,2.39277549769705,0,0,0,0,0.308097234229289,0,0,0.107420244868274,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.562677665642051,0,0,2.53350489753592,0.19924798825107,0,0,0,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0,0,0.885741385813839,1.92954301800653,0,0.110579259931225,0.295547618953547,0,0,1.53366118706464,0.153900517007594,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0.317873157960757,0,0,0,0,0,0,0,0,0,0.417687798021821,0.134802265961354,0,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0.150323419414493,0.72581733978073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50648636764703,0,0,0,0,0,0,1.02956998717179,0,0,0,0,0,0.305994652908965,0,0,0.547621515567972,0,0.429765441419957,0,0,0.458320848023367,0.717873024576814,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0.272406812223151,1.12527203925513,2.20063098555574,1.24632101408756,0,0,0.668245123238271,0,0,0,0,0,1.15149118391667,0,0,0,0,0,0,0,0.410462603746695,0,0.113312091520126,0,0,0.258565912723101,0.39669780522807,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.251909307065,0,0.221858103073705,0.0620964029413835,0.415045904808692,0,0,0,0,0,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0.219284049578707,0,0,0,0,0.345430341731199,0,0.967809053062115,0.389720617678777,0,0,0,0,0,0,0,0,0,0,0,0,1.02315497042921,0.646948868380091,0.786329709279482,0.54604819096007,0,0.425149840203366,0.123935764259002,0,0,0,0,0,0.3062454773532,0.770750701157514,0,2.87340946302872,0,1.00828678488687,0.414943514785307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472763092328763,0.781078098613847,0.826747186004736,0.443910671357348,2.18789923607288,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0.0679697329768317,0.855046056317038,0,0,0.078493092850514,0.157115589916002,0,0.913158720509496,0,0,0,0,0,0.521574816907738,0,0,0,0,0,0,0,0,0.68732060563215,0,0,0,0,0,0,0,0,0,0.701818390386317,0,0,0,0.549702583727146,2.11347980993343,0.0771741581079447,0,0,0,0,0,0.594092800654172,0,0,0,0.128915775947154,0,0,0,0,0.730336388246517,0.458729283404541,0.143339583151451,0,0.339957450954573,0.436350690340377,0,0,0,0,0.252332849670158,0.327796715891087,0,0,0,0,0,0.0757786982182394,0,0,1.44806194206653,0,0,0,0,0.448527450322454,0,0,0,0,0,0,0,0.325613074443898,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.85870796139317,0.136874425072884,1.12988375635323,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0.32592226663359,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702678285545008,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0.213557388818567,0,0,0,0.515281080091258,0.18611685633159,0.337552664482532,0,0,0,0,0.710019185033229,0,0,0,0,0,0.121973706129595,0,0.348581828608555,0,0.504641701751257,1.82488679537915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46511143709349,2.39277549769705,0,0,0,0,0.308097234229289,0,0,0.107420244868274,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.562677665642051,0,0,2.53350489753592,0.19924798825107,0,0,0,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0,0,0.885741385813839,1.92954301800653,0,0.110579259931225,0.295547618953547,0,0,1.53366118706464,0.153900517007594,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0.317873157960757,0,0,0,0,0,0,0,0,0,0.417687798021821,0.134802265961354,0,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0.150323419414493,0.72581733978073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50648636764703,0,0,0,0,0,0,1.02956998717179,0,0,0,0,0,0.305994652908965,0,0,0.547621515567972,0,0.429765441419957,0,0,0.458320848023367,0.717873024576814,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0.272406812223151,1.12527203925513,2.20063098555574,1.24632101408756,0,0,0.668245123238271,0,0,0,0,0,1.15149118391667,0,0,0,0,0,0,0,0.410462603746695,0,0.113312091520126,0,0,0.258565912723101,0.39669780522807,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.251909307065,0,0.221858103073705,0.0620964029413835,0.415045904808692,0,0,0,0,0,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0.219284049578707,0,0,0,0,0.345430341731199,0,0.967809053062115,0.389720617678777,0,0,0,0,0,0,0,0,0,0,0,0,1.02315497042921,0.646948868380091,0.786329709279482,0.54604819096007,0,0.425149840203366,0.123935764259002,0,0,0,0,0,0.3062454773532,0.770750701157514,0,2.87340946302872,0,1.00828678488687,0.414943514785307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472763092328763,0.781078098613847,0.826747186004736,0.443910671357348,2.18789923607288,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0.0679697329768317,0.855046056317038,0,0,0.078493092850514,0.157115589916002,0,0.913158720509496,0,0,0,0,0,0.521574816907738,0,0,0,0,0,0,0,0,0.68732060563215,0,0,0,0,0,0,0,0,0,0.701818390386317,0,0,0,0.549702583727146,2.11347980993343,0.0771741581079447,0,0,0,0,0,0.594092800654172,0,0,0,0.128915775947154,0,0,0,0,0.730336388246517,0.458729283404541,0.143339583151451,0,0.339957450954573,0.436350690340377,0,0,0,0,0.252332849670158,0.327796715891087,0,0,0,0,0,0.0757786982182394,0,0,1.44806194206653,0,0,0,0,0.448527450322454,0,0,0,0,0,0,0,0.325613074443898,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:91962688..91962692,+ | |short_description=p@chr11:91962688..91962692,+ | ||
}} | }} |
Revision as of 02:48, 17 November 2012
Short description: | p@chr11:91962688..91962692, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:91962688..91962692, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.51e-15 | 6 |
neuroblast | 1.51e-15 | 6 |
electrically signaling cell | 1.51e-15 | 6 |
neuronal stem cell | 8.30e-12 | 8 |
Ontology term | p-value | n |
---|---|---|
regional part of forebrain | 2.96e-14 | 41 |
forebrain | 2.96e-14 | 41 |
anterior neural tube | 2.96e-14 | 41 |
future forebrain | 2.96e-14 | 41 |
regional part of telencephalon | 3.84e-14 | 32 |
cerebral hemisphere | 3.84e-14 | 32 |
nervous system | 1.02e-13 | 89 |
cerebral cortex | 2.13e-13 | 25 |
pallium | 2.13e-13 | 25 |
brain grey matter | 2.69e-13 | 34 |
gray matter | 2.69e-13 | 34 |
telencephalon | 2.69e-13 | 34 |
central nervous system | 6.90e-13 | 81 |
neocortex | 8.02e-12 | 20 |
regional part of nervous system | 7.04e-11 | 53 |
regional part of brain | 7.04e-11 | 53 |
regional part of cerebral cortex | 8.75e-11 | 22 |
neural tube | 2.95e-10 | 56 |
neural rod | 2.95e-10 | 56 |
future spinal cord | 2.95e-10 | 56 |
neural keel | 2.95e-10 | 56 |
pre-chordal neural plate | 2.37e-09 | 61 |
occipital lobe | 5.95e-09 | 5 |
brain | 3.58e-08 | 68 |
future brain | 3.58e-08 | 68 |
neural plate | 9.69e-07 | 82 |
presumptive neural plate | 9.69e-07 | 82 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.