FFCP PHASE1:Hg19::chr1:225615723..225615802,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000037!1.71e-36!172;CL:0000566!1.71e-36!172;CL:0000988!2.03e-34!182;CL:0002032!2.11e-33!165;CL:0000837!2.11e-33!165;CL:0000738!3.77e-24!140;CL:0002087!4.07e-24!119;CL:0000542!1.22e-22!53;CL:0000051!1.22e-22!53;CL:0000838!5.51e-22!52;CL:0002031!1.99e-19!124;CL:0000763!5.74e-13!112;CL:0000049!5.74e-13!112;CL:0000945!3.85e-11!24;CL:0000826!3.85e-11!24;CL:0000084!4.57e-11!25;CL:0000827!4.57e-11!25;CL:0000791!3.88e-08!18;CL:0000789!3.88e-08!18;CL:0002420!3.88e-08!18;CL:0002419!3.88e-08!18;CL:0000790!3.88e-08!18;CL:0000236!4.91e-08!14 | |ontology_enrichment_celltype=CL:0000037!1.71e-36!172;CL:0000566!1.71e-36!172;CL:0000988!2.03e-34!182;CL:0002032!2.11e-33!165;CL:0000837!2.11e-33!165;CL:0000738!3.77e-24!140;CL:0002087!4.07e-24!119;CL:0000542!1.22e-22!53;CL:0000051!1.22e-22!53;CL:0000838!5.51e-22!52;CL:0002031!1.99e-19!124;CL:0000763!5.74e-13!112;CL:0000049!5.74e-13!112;CL:0000945!3.85e-11!24;CL:0000826!3.85e-11!24;CL:0000084!4.57e-11!25;CL:0000827!4.57e-11!25;CL:0000791!3.88e-08!18;CL:0000789!3.88e-08!18;CL:0002420!3.88e-08!18;CL:0002419!3.88e-08!18;CL:0000790!3.88e-08!18;CL:0000236!4.91e-08!14 | ||
|ontology_enrichment_celltype_v019=CL:0000542;1.25e-13;53!CL:0000945;3.89e-11;24!CL:0000084;4.69e-11;25!CL:0002087;3.76e-08;104!CL:0000791;3.92e-08;18!CL:0000789;3.92e-08;18!CL:0002419;3.92e-08;18!CL:0000236;8.25e-08;13!CL:0000988;3.76e-07;177 | |ontology_enrichment_celltype_v019=CL:0000542;1.25e-13;53!CL:0000945;3.89e-11;24!CL:0000084;4.69e-11;25!CL:0002087;3.76e-08;104!CL:0000791;3.92e-08;18!CL:0000789;3.92e-08;18!CL:0002419;3.92e-08;18!CL:0000236;8.25e-08;13!CL:0000988;3.76e-07;177 | ||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.31e-37,168;CL:0000988,5.44e-35,177;CL:0002032,4.31e-34,161;CL:0000837,4.31e-34,161;CL:0002087,7.48e-25,115;CL:0000738,9.26e-25,136;CL:0000542,1.22e-22,53;CL:0000051,1.22e-22,53;CL:0000838,5.51e-22,52;CL:0002031,5.45e-20,120;CL:0000763,2.20e-13,108;CL:0000049,2.20e-13,108;CL:0000945,3.85e-11,24;CL:0000826,3.85e-11,24;CL:0000084,4.57e-11,25;CL:0000827,4.57e-11,25;CL:0000791,3.88e-08,18;CL:0000789,3.88e-08,18;CL:0002420,3.88e-08,18;CL:0002419,3.88e-08,18;CL:0000790,3.88e-08,18;CL:0000236,4.91e-08,14 | |||
|ontology_enrichment_development_v019=CL:0000051;1.25e-13;53!CL:0000790;3.92e-08;18 | |ontology_enrichment_development_v019=CL:0000051;1.25e-13;53!CL:0000790;3.92e-08;18 | ||
|ontology_enrichment_disease=DOID:2531!2.11e-19!51;DOID:0060083!2.11e-19!51;DOID:1240!1.27e-16!39;DOID:8692!1.48e-12!31;DOID:162!1.60e-07!235;DOID:14566!9.26e-07!239 | |ontology_enrichment_disease=DOID:2531!2.11e-19!51;DOID:0060083!2.11e-19!51;DOID:1240!1.27e-16!39;DOID:8692!1.48e-12!31;DOID:162!1.60e-07!235;DOID:14566!9.26e-07!239 | ||
|ontology_enrichment_disease_v019=DOID:1240;2.28e-13;39!DOID:8692;3.25e-12;31!DOID:2531;1.22e-11;51!DOID:0060083;1.22e-11;51 | |ontology_enrichment_disease_v019=DOID:1240;2.28e-13;39!DOID:8692;3.25e-12;31!DOID:2531;1.22e-11;51!DOID:0060083;1.22e-11;51 | ||
|ontology_enrichment_disease_v019_2=DOID:2531,2.11e-19,51;DOID:0060083,2.11e-19,51;DOID:1240,1.27e-16,39;DOID:8692,1.48e-12,31;DOID:162,1.60e-07,235;DOID:14566,9.26e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0000178!8.27e-10!15;UBERON:0000179!8.27e-10!15;UBERON:0000463!8.27e-10!15;UBERON:0002193!2.15e-09!112;UBERON:0002390!1.08e-08!102;UBERON:0003061!1.08e-08!102 | |ontology_enrichment_uberon=UBERON:0000178!8.27e-10!15;UBERON:0000179!8.27e-10!15;UBERON:0000463!8.27e-10!15;UBERON:0002193!2.15e-09!112;UBERON:0002390!1.08e-08!102;UBERON:0003061!1.08e-08!102 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.00e-10;15!UBERON:0000179;8.00e-10;15!UBERON:0000463;8.00e-10;15!UBERON:0002390;9.91e-07;32 | |ontology_enrichment_uberon_v019=UBERON:0000178;8.00e-10;15!UBERON:0000179;8.00e-10;15!UBERON:0000463;8.00e-10;15!UBERON:0002390;9.91e-07;32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,8.27e-10,15;UBERON:0000179,8.27e-10,15;UBERON:0000463,8.27e-10,15;UBERON:0002193,1.09e-09,108;UBERON:0002390,5.43e-09,98;UBERON:0003061,5.43e-09,98 | |||
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| ||
|short_description=p1@LBR | |short_description=p1@LBR | ||
}} | }} |
Revision as of 07:43, 17 November 2012
Short description: | p1@LBR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_LBR_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000272163, uc001hoy.2, uc001hpa.1_5end |
EntrezGene: | LBR |
HGNC: | 6518 |
UniProt: | Q14739 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 3.31e-37 | 168 |
hematopoietic cell | 5.44e-35 | 177 |
hematopoietic oligopotent progenitor cell | 4.31e-34 | 161 |
hematopoietic multipotent progenitor cell | 4.31e-34 | 161 |
nongranular leukocyte | 7.48e-25 | 115 |
leukocyte | 9.26e-25 | 136 |
lymphocyte | 1.22e-22 | 53 |
common lymphoid progenitor | 1.22e-22 | 53 |
lymphoid lineage restricted progenitor cell | 5.51e-22 | 52 |
hematopoietic lineage restricted progenitor cell | 5.45e-20 | 120 |
myeloid cell | 2.20e-13 | 108 |
common myeloid progenitor | 2.20e-13 | 108 |
lymphocyte of B lineage | 3.85e-11 | 24 |
pro-B cell | 3.85e-11 | 24 |
T cell | 4.57e-11 | 25 |
pro-T cell | 4.57e-11 | 25 |
mature alpha-beta T cell | 3.88e-08 | 18 |
alpha-beta T cell | 3.88e-08 | 18 |
immature T cell | 3.88e-08 | 18 |
mature T cell | 3.88e-08 | 18 |
immature alpha-beta T cell | 3.88e-08 | 18 |
B cell | 4.91e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
blood | 8.27e-10 | 15 |
haemolymphatic fluid | 8.27e-10 | 15 |
organism substance | 8.27e-10 | 15 |
hemolymphoid system | 1.09e-09 | 108 |
hematopoietic system | 5.43e-09 | 98 |
blood island | 5.43e-09 | 98 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.11e-19 | 51 |
immune system cancer | 2.11e-19 | 51 |
leukemia | 1.27e-16 | 39 |
myeloid leukemia | 1.48e-12 | 31 |
cancer | 1.60e-07 | 235 |
disease of cellular proliferation | 9.26e-07 | 239 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.