FFCP PHASE1:Hg19::chr5:134259812..134259816,+: Difference between revisions
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000540;2.19e-08;6!CL:0000404;2.19e-08;6!CL:0000710;5.26e-07;20!CL:0000764;6.79e-07;2!CL:0000558;6.79e-07;2 | |ontology_enrichment_celltype_v019=CL:0000540;2.19e-08;6!CL:0000404;2.19e-08;6!CL:0000710;5.26e-07;20!CL:0000764;6.79e-07;2!CL:0000558;6.79e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.07e-08,6;CL:0000031,2.07e-08,6;CL:0000404,2.07e-08,6;CL:0000710,4.69e-07,20;CL:0000764,7.23e-07,2;CL:0000765,7.23e-07,2;CL:0000050,7.23e-07,2;CL:0000038,7.23e-07,2;CL:0000558,7.23e-07,2;CL:0000547,7.23e-07,2;CL:0000549,7.23e-07,2;CL:0000550,7.23e-07,2;CL:0000552,7.23e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000031;2.19e-08;6!UBERON:0008947;2.44e-07;29 | |ontology_enrichment_development_v019=CL:0000031;2.19e-08;6!UBERON:0008947;2.44e-07;29 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.08e-11!57;UBERON:0005068!5.08e-11!57;UBERON:0006241!5.08e-11!57;UBERON:0007135!5.08e-11!57;UBERON:0001737!8.82e-11!9;UBERON:0002616!2.28e-09!59;UBERON:0001017!1.27e-08!82;UBERON:0002780!2.06e-08!41;UBERON:0001890!2.06e-08!41;UBERON:0006240!2.06e-08!41;UBERON:0005743!2.97e-08!86;UBERON:0003080!4.72e-08!42;UBERON:0002020!5.62e-08!34;UBERON:0003528!5.62e-08!34;UBERON:0000955!3.21e-07!69;UBERON:0006238!3.21e-07!69;UBERON:0000073!3.94e-07!94;UBERON:0001016!3.94e-07!94;UBERON:0007023!5.02e-07!115 | |ontology_enrichment_uberon=UBERON:0001049!5.08e-11!57;UBERON:0005068!5.08e-11!57;UBERON:0006241!5.08e-11!57;UBERON:0007135!5.08e-11!57;UBERON:0001737!8.82e-11!9;UBERON:0002616!2.28e-09!59;UBERON:0001017!1.27e-08!82;UBERON:0002780!2.06e-08!41;UBERON:0001890!2.06e-08!41;UBERON:0006240!2.06e-08!41;UBERON:0005743!2.97e-08!86;UBERON:0003080!4.72e-08!42;UBERON:0002020!5.62e-08!34;UBERON:0003528!5.62e-08!34;UBERON:0000955!3.21e-07!69;UBERON:0006238!3.21e-07!69;UBERON:0000073!3.94e-07!94;UBERON:0001016!3.94e-07!94;UBERON:0007023!5.02e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.26e-27;9!UBERON:0001557;2.26e-27;9 | |ontology_enrichment_uberon_v019=UBERON:0001737;2.26e-27;9!UBERON:0001557;2.26e-27;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.87e-27,9;UBERON:0001557,4.22e-12,19;UBERON:0001049,2.85e-10,56;UBERON:0005068,2.85e-10,56;UBERON:0006241,2.85e-10,56;UBERON:0007135,2.85e-10,56;UBERON:0001017,4.47e-10,81;UBERON:0001016,9.68e-10,89;UBERON:0000073,1.40e-09,53;UBERON:0002616,1.40e-09,53;UBERON:0002780,6.87e-08,41;UBERON:0001890,6.87e-08,41;UBERON:0003080,6.87e-08,41;UBERON:0006240,6.87e-08,41;UBERON:0003075,6.62e-07,82;UBERON:0007284,6.62e-07,82 | |||
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| ||
|short_description=p3@MTND6P4 | |short_description=p3@MTND6P4 | ||
}} | }} |
Revision as of 11:44, 17 November 2012
Short description: | p3@MTND6P4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_MTND6P4_5end |
Coexpression cluster: | C256_occipital_caudate_amygdala_medial_thalamus_hippocampus_medulla |
Association with transcript: | 0bp_to_ENST00000506002_5end |
EntrezGene: | NA |
HGNC: | 39467 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.07e-08 | 6 |
neuroblast | 2.07e-08 | 6 |
electrically signaling cell | 2.07e-08 | 6 |
neurecto-epithelial cell | 4.69e-07 | 20 |
erythroid lineage cell | 7.23e-07 | 2 |
erythroblast | 7.23e-07 | 2 |
megakaryocyte-erythroid progenitor cell | 7.23e-07 | 2 |
erythroid progenitor cell | 7.23e-07 | 2 |
reticulocyte | 7.23e-07 | 2 |
proerythroblast | 7.23e-07 | 2 |
basophilic erythroblast | 7.23e-07 | 2 |
polychromatophilic erythroblast | 7.23e-07 | 2 |
orthochromatic erythroblast | 7.23e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.87e-27 | 9 |
upper respiratory tract | 4.22e-12 | 19 |
neural tube | 2.85e-10 | 56 |
neural rod | 2.85e-10 | 56 |
future spinal cord | 2.85e-10 | 56 |
neural keel | 2.85e-10 | 56 |
central nervous system | 4.47e-10 | 81 |
nervous system | 9.68e-10 | 89 |
regional part of nervous system | 1.40e-09 | 53 |
regional part of brain | 1.40e-09 | 53 |
regional part of forebrain | 6.87e-08 | 41 |
forebrain | 6.87e-08 | 41 |
anterior neural tube | 6.87e-08 | 41 |
future forebrain | 6.87e-08 | 41 |
neural plate | 6.62e-07 | 82 |
presumptive neural plate | 6.62e-07 | 82 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.