FFCP PHASE1:Hg19::chr4:5894905..5894913,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;2.21e-15;2 | |ontology_enrichment_celltype_v019=CL:0000047;2.21e-15;2 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.42e-57!57;UBERON:0005068!7.42e-57!57;UBERON:0006241!7.42e-57!57;UBERON:0007135!7.42e-57!57;UBERON:0005743!4.76e-56!86;UBERON:0001869!7.52e-56!32;UBERON:0001017!8.80e-56!82;UBERON:0002780!1.10e-55!41;UBERON:0001890!1.10e-55!41;UBERON:0006240!1.10e-55!41;UBERON:0003080!3.05e-54!42;UBERON:0000073!5.66e-53!94;UBERON:0001016!5.66e-53!94;UBERON:0002020!2.26e-52!34;UBERON:0003528!2.26e-52!34;UBERON:0001893!2.44e-52!34;UBERON:0000955!6.54e-52!69;UBERON:0006238!6.54e-52!69;UBERON:0002616!8.30e-51!59;UBERON:0002791!4.89e-49!33;UBERON:0002619!4.50e-48!22;UBERON:0002346!3.68e-47!90;UBERON:0001950!9.12e-47!20;UBERON:0003075!1.22e-46!86;UBERON:0007284!1.22e-46!86;UBERON:0000956!4.85e-42!25;UBERON:0000203!4.85e-42!25;UBERON:0003056!5.69e-42!61;UBERON:0000924!2.22e-30!173;UBERON:0006601!2.22e-30!173;UBERON:0004121!1.75e-29!169;UBERON:0000033!4.59e-28!123;UBERON:0000153!2.02e-26!129;UBERON:0007811!2.02e-26!129;UBERON:0007023!1.03e-24!115;UBERON:0002021!3.41e-21!5;UBERON:0000369!1.41e-17!4;UBERON:0002435!1.41e-17!4;UBERON:0000204!1.41e-17!4;UBERON:0010082!1.41e-17!4;UBERON:0000025!3.64e-15!194;UBERON:0005383!8.91e-14!3;UBERON:0005382!8.91e-14!3;UBERON:0001872!2.52e-13!5;UBERON:0001871!8.87e-13!7;UBERON:0002420!8.66e-12!9;UBERON:0007245!8.66e-12!9;UBERON:0010009!8.66e-12!9;UBERON:0010011!8.66e-12!9;UBERON:0000454!8.66e-12!9;UBERON:0002308!9.48e-12!9;UBERON:0000125!9.48e-12!9;UBERON:0004111!9.52e-11!241;UBERON:0000200!1.62e-10!6;UBERON:0000483!1.75e-10!309;UBERON:0000119!2.65e-10!312;UBERON:0009663!4.57e-10!7;UBERON:0001873!1.01e-09!2;UBERON:0010122!1.01e-09!2;UBERON:0000064!1.29e-09!219;UBERON:0000475!2.88e-08!365;UBERON:0000349!3.76e-08!5;UBERON:0000477!6.61e-08!286 | |ontology_enrichment_uberon=UBERON:0001049!7.42e-57!57;UBERON:0005068!7.42e-57!57;UBERON:0006241!7.42e-57!57;UBERON:0007135!7.42e-57!57;UBERON:0005743!4.76e-56!86;UBERON:0001869!7.52e-56!32;UBERON:0001017!8.80e-56!82;UBERON:0002780!1.10e-55!41;UBERON:0001890!1.10e-55!41;UBERON:0006240!1.10e-55!41;UBERON:0003080!3.05e-54!42;UBERON:0000073!5.66e-53!94;UBERON:0001016!5.66e-53!94;UBERON:0002020!2.26e-52!34;UBERON:0003528!2.26e-52!34;UBERON:0001893!2.44e-52!34;UBERON:0000955!6.54e-52!69;UBERON:0006238!6.54e-52!69;UBERON:0002616!8.30e-51!59;UBERON:0002791!4.89e-49!33;UBERON:0002619!4.50e-48!22;UBERON:0002346!3.68e-47!90;UBERON:0001950!9.12e-47!20;UBERON:0003075!1.22e-46!86;UBERON:0007284!1.22e-46!86;UBERON:0000956!4.85e-42!25;UBERON:0000203!4.85e-42!25;UBERON:0003056!5.69e-42!61;UBERON:0000924!2.22e-30!173;UBERON:0006601!2.22e-30!173;UBERON:0004121!1.75e-29!169;UBERON:0000033!4.59e-28!123;UBERON:0000153!2.02e-26!129;UBERON:0007811!2.02e-26!129;UBERON:0007023!1.03e-24!115;UBERON:0002021!3.41e-21!5;UBERON:0000369!1.41e-17!4;UBERON:0002435!1.41e-17!4;UBERON:0000204!1.41e-17!4;UBERON:0010082!1.41e-17!4;UBERON:0000025!3.64e-15!194;UBERON:0005383!8.91e-14!3;UBERON:0005382!8.91e-14!3;UBERON:0001872!2.52e-13!5;UBERON:0001871!8.87e-13!7;UBERON:0002420!8.66e-12!9;UBERON:0007245!8.66e-12!9;UBERON:0010009!8.66e-12!9;UBERON:0010011!8.66e-12!9;UBERON:0000454!8.66e-12!9;UBERON:0002308!9.48e-12!9;UBERON:0000125!9.48e-12!9;UBERON:0004111!9.52e-11!241;UBERON:0000200!1.62e-10!6;UBERON:0000483!1.75e-10!309;UBERON:0000119!2.65e-10!312;UBERON:0009663!4.57e-10!7;UBERON:0001873!1.01e-09!2;UBERON:0010122!1.01e-09!2;UBERON:0000064!1.29e-09!219;UBERON:0000475!2.88e-08!365;UBERON:0000349!3.76e-08!5;UBERON:0000477!6.61e-08!286 | ||
|ontology_enrichment_uberon_v019=UBERON:0002021;2.40e-23;5!UBERON:0001950;6.28e-22;20!UBERON:0002619;4.46e-20;22!UBERON:0000956;7.84e-18;25!UBERON:0000203;7.84e-18;25!UBERON:0000922;7.89e-14;49!UBERON:0002791;8.25e-14;32!UBERON:0001869;1.27e-13;32!UBERON:0003528;6.58e-12;34!UBERON:0002020;6.58e-12;34!UBERON:0001893;1.01e-11;34!UBERON:0002114;7.42e-11;2!UBERON:0002780;8.06e-11;41!UBERON:0001890;8.06e-11;41!UBERON:0001016;1.36e-09;83!UBERON:0000955;1.06e-08;68!UBERON:0002108;5.08e-07;4!UBERON:0001872;5.54e-07;5!UBERON:0001017;6.05e-07;75 | |ontology_enrichment_uberon_v019=UBERON:0002021;2.40e-23;5!UBERON:0001950;6.28e-22;20!UBERON:0002619;4.46e-20;22!UBERON:0000956;7.84e-18;25!UBERON:0000203;7.84e-18;25!UBERON:0000922;7.89e-14;49!UBERON:0002791;8.25e-14;32!UBERON:0001869;1.27e-13;32!UBERON:0003528;6.58e-12;34!UBERON:0002020;6.58e-12;34!UBERON:0001893;1.01e-11;34!UBERON:0002114;7.42e-11;2!UBERON:0002780;8.06e-11;41!UBERON:0001890;8.06e-11;41!UBERON:0001016;1.36e-09;83!UBERON:0000955;1.06e-08;68!UBERON:0002108;5.08e-07;4!UBERON:0001872;5.54e-07;5!UBERON:0001017;6.05e-07;75 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.27e-23,5;UBERON:0001950,6.11e-22,20;UBERON:0002619,4.35e-20,22;UBERON:0000956,7.67e-18,25;UBERON:0000203,7.67e-18,25;UBERON:0002791,3.53e-14,32;UBERON:0001869,3.53e-14,32;UBERON:0003528,2.12e-13,34;UBERON:0002020,2.12e-13,34;UBERON:0001893,2.12e-13,34;UBERON:0001017,1.68e-12,81;UBERON:0001016,2.66e-11,89;UBERON:0002780,2.98e-11,41;UBERON:0001890,2.98e-11,41;UBERON:0003080,2.98e-11,41;UBERON:0006240,2.98e-11,41;UBERON:0002114,7.42e-11,2;UBERON:0000955,1.89e-10,68;UBERON:0006238,1.89e-10,68;UBERON:0000073,7.42e-09,53;UBERON:0002616,7.42e-09,53;UBERON:0001049,2.06e-08,56;UBERON:0005068,2.06e-08,56;UBERON:0006241,2.06e-08,56;UBERON:0007135,2.06e-08,56;UBERON:0003056,9.09e-08,61;UBERON:0002108,5.08e-07,4;UBERON:0001872,5.70e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60279707715243,0,0.837581326671744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,7.98455192004777,0,0,0,0,0,0,0.344743373241465,0,0,0.885741385813839,0.723578631752448,0,0.110579259931225,0,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,4.59109142445735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0.303747783290123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0.124192805882767,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0.212574920101683,0,0,0,0,0,0,0,0.385375350578757,1.41696576325585,0.319267718114302,0.205116364240755,2.7727886584389,0.691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337687923091973,0,0.413373593002368,0.19024743058172,4.37579847214576,0,0,0,0,0,0,0,0.455324382702595,0,0,0,0.271878931907327,0.0657727735628491,0,0,0,0.942693539496011,0,0,0,0,0.142953088353313,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0.392616934229891,0,0,0,0,0,0,0,0,0,0,0,0,0,0.747906392100062,6.54526035510566,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60279707715243,0,0.837581326671744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,7.98455192004777,0,0,0,0,0,0,0.344743373241465,0,0,0.885741385813839,0.723578631752448,0,0.110579259931225,0,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,4.59109142445735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0.303747783290123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0.124192805882767,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0.212574920101683,0,0,0,0,0,0,0,0.385375350578757,1.41696576325585,0.319267718114302,0.205116364240755,2.7727886584389,0.691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337687923091973,0,0.413373593002368,0.19024743058172,4.37579847214576,0,0,0,0,0,0,0,0.455324382702595,0,0,0,0.271878931907327,0.0657727735628491,0,0,0,0.942693539496011,0,0,0,0,0.142953088353313,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0.392616934229891,0,0,0,0,0,0,0,0,0,0,0,0,0,0.747906392100062,6.54526035510566,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p10@CRMP1 | |short_description=p10@CRMP1 | ||
}} | }} |
Revision as of 04:45, 18 November 2012
Short description: | p10@CRMP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_CRMP1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -120bp_to_ENST00000324989, NM_001014809, uc003gis.2_5end |
EntrezGene: | CRMP1 |
HGNC: | 2365 |
UniProt: | A0EJG6B3KT07Q96I11 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 2.27e-23 | 5 |
neocortex | 6.11e-22 | 20 |
regional part of cerebral cortex | 4.35e-20 | 22 |
cerebral cortex | 7.67e-18 | 25 |
pallium | 7.67e-18 | 25 |
regional part of telencephalon | 3.53e-14 | 32 |
cerebral hemisphere | 3.53e-14 | 32 |
brain grey matter | 2.12e-13 | 34 |
gray matter | 2.12e-13 | 34 |
telencephalon | 2.12e-13 | 34 |
central nervous system | 1.68e-12 | 81 |
nervous system | 2.66e-11 | 89 |
regional part of forebrain | 2.98e-11 | 41 |
forebrain | 2.98e-11 | 41 |
anterior neural tube | 2.98e-11 | 41 |
future forebrain | 2.98e-11 | 41 |
duodenum | 7.42e-11 | 2 |
brain | 1.89e-10 | 68 |
future brain | 1.89e-10 | 68 |
regional part of nervous system | 7.42e-09 | 53 |
regional part of brain | 7.42e-09 | 53 |
neural tube | 2.06e-08 | 56 |
neural rod | 2.06e-08 | 56 |
future spinal cord | 2.06e-08 | 56 |
neural keel | 2.06e-08 | 56 |
pre-chordal neural plate | 9.09e-08 | 61 |
small intestine | 5.08e-07 | 4 |
parietal lobe | 5.70e-07 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.