FFCP PHASE1:Hg19::chr19:39882010..39882064,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0002057!8.98e-11!42;CL:0000860!3.08e-09!45 | |ontology_enrichment_celltype=CL:0002057!8.98e-11!42;CL:0000860!3.08e-09!45 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.84e-12;33!CL:0002057;6.84e-12;33!CL:0000473;1.28e-08;39!CL:0000234;1.28e-08;39 | |ontology_enrichment_celltype_v019=CL:0000860;6.84e-12;33!CL:0002057;6.84e-12;33!CL:0000473;1.28e-08;39!CL:0000234;1.28e-08;39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.98e-11,42;CL:0002057,8.98e-11,42;CL:0000473,1.63e-09,48;CL:0000234,1.63e-09,48 | |||
|ontology_enrichment_development_v019=CL:0002057;3.40e-08;42 | |ontology_enrichment_development_v019=CL:0002057;3.40e-08;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.26e-18!57;UBERON:0005068!5.26e-18!57;UBERON:0006241!5.26e-18!57;UBERON:0007135!5.26e-18!57;UBERON:0007023!1.25e-15!115;UBERON:0002616!2.60e-15!59;UBERON:0001017!1.10e-14!82;UBERON:0005743!1.18e-14!86;UBERON:0003075!1.77e-14!86;UBERON:0007284!1.77e-14!86;UBERON:0000955!1.86e-14!69;UBERON:0006238!1.86e-14!69;UBERON:0000073!2.80e-13!94;UBERON:0001016!2.80e-13!94;UBERON:0002780!4.90e-13!41;UBERON:0001890!4.90e-13!41;UBERON:0006240!4.90e-13!41;UBERON:0003080!8.44e-13!42;UBERON:0002346!1.15e-12!90;UBERON:0003056!6.88e-12!61;UBERON:0002020!4.06e-11!34;UBERON:0003528!4.06e-11!34;UBERON:0001893!4.48e-11!34;UBERON:0001869!6.91e-11!32;UBERON:0002791!1.17e-10!33;UBERON:0002619!2.92e-09!22;UBERON:0001950!2.14e-08!20;UBERON:0000956!2.42e-08!25;UBERON:0000203!2.42e-08!25;UBERON:0000025!4.56e-08!194;UBERON:0000033!4.65e-07!123 | |ontology_enrichment_uberon=UBERON:0001049!5.26e-18!57;UBERON:0005068!5.26e-18!57;UBERON:0006241!5.26e-18!57;UBERON:0007135!5.26e-18!57;UBERON:0007023!1.25e-15!115;UBERON:0002616!2.60e-15!59;UBERON:0001017!1.10e-14!82;UBERON:0005743!1.18e-14!86;UBERON:0003075!1.77e-14!86;UBERON:0007284!1.77e-14!86;UBERON:0000955!1.86e-14!69;UBERON:0006238!1.86e-14!69;UBERON:0000073!2.80e-13!94;UBERON:0001016!2.80e-13!94;UBERON:0002780!4.90e-13!41;UBERON:0001890!4.90e-13!41;UBERON:0006240!4.90e-13!41;UBERON:0003080!8.44e-13!42;UBERON:0002346!1.15e-12!90;UBERON:0003056!6.88e-12!61;UBERON:0002020!4.06e-11!34;UBERON:0003528!4.06e-11!34;UBERON:0001893!4.48e-11!34;UBERON:0001869!6.91e-11!32;UBERON:0002791!1.17e-10!33;UBERON:0002619!2.92e-09!22;UBERON:0001950!2.14e-08!20;UBERON:0000956!2.42e-08!25;UBERON:0000203!2.42e-08!25;UBERON:0000025!4.56e-08!194;UBERON:0000033!4.65e-07!123 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;5.83e-10;32!UBERON:0001893;9.21e-10;34!UBERON:0003528;1.01e-09;34!UBERON:0002020;1.01e-09;34!UBERON:0000073;1.06e-09;53!UBERON:0002616;1.06e-09;53!UBERON:0002780;1.52e-09;41!UBERON:0001890;1.52e-09;41!UBERON:0002791;2.08e-09;32!UBERON:0002619;2.98e-09;22!UBERON:0001950;2.12e-08;20!UBERON:0000956;2.58e-08;25!UBERON:0000203;2.58e-08;25!UBERON:0001017;1.18e-07;75!UBERON:0000955;1.21e-07;68 | |ontology_enrichment_uberon_v019=UBERON:0001869;5.83e-10;32!UBERON:0001893;9.21e-10;34!UBERON:0003528;1.01e-09;34!UBERON:0002020;1.01e-09;34!UBERON:0000073;1.06e-09;53!UBERON:0002616;1.06e-09;53!UBERON:0002780;1.52e-09;41!UBERON:0001890;1.52e-09;41!UBERON:0002791;2.08e-09;32!UBERON:0002619;2.98e-09;22!UBERON:0001950;2.12e-08;20!UBERON:0000956;2.58e-08;25!UBERON:0000203;2.58e-08;25!UBERON:0001017;1.18e-07;75!UBERON:0000955;1.21e-07;68 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.96e-18,56;UBERON:0005068,2.96e-18,56;UBERON:0006241,2.96e-18,56;UBERON:0007135,2.96e-18,56;UBERON:0000073,4.61e-17,53;UBERON:0002616,4.61e-17,53;UBERON:0007023,2.20e-15,114;UBERON:0003075,6.08e-15,82;UBERON:0007284,6.08e-15,82;UBERON:0001017,8.19e-15,81;UBERON:0000955,1.30e-14,68;UBERON:0006238,1.30e-14,68;UBERON:0001016,2.38e-13,89;UBERON:0002346,4.88e-13,86;UBERON:0002780,4.90e-13,41;UBERON:0001890,4.90e-13,41;UBERON:0003080,4.90e-13,41;UBERON:0006240,4.90e-13,41;UBERON:0003056,1.47e-12,61;UBERON:0003528,4.06e-11,34;UBERON:0002020,4.06e-11,34;UBERON:0001893,4.48e-11,34;UBERON:0001869,6.91e-11,32;UBERON:0002791,2.94e-10,32;UBERON:0010371,7.57e-10,104;UBERON:0002619,2.92e-09,22;UBERON:0001950,2.14e-08,20;UBERON:0000956,2.42e-08,25;UBERON:0000203,2.42e-08,25;UBERON:0010314,3.73e-08,132;UBERON:0000025,6.92e-08,192 | |||
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|short_description=p1@MED29 | |short_description=p1@MED29 | ||
}} | }} |
Revision as of 11:10, 18 November 2012
Short description: | p1@MED29 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_MED29_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000435462_5end |
EntrezGene: | MED29 |
HGNC: | 23074 |
UniProt: | B4DGM4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.98e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.98e-11 | 42 |
defensive cell | 1.63e-09 | 48 |
phagocyte | 1.63e-09 | 48 |
Ontology term | p-value | n |
---|---|---|
neural tube | 2.96e-18 | 56 |
neural rod | 2.96e-18 | 56 |
future spinal cord | 2.96e-18 | 56 |
neural keel | 2.96e-18 | 56 |
regional part of nervous system | 4.61e-17 | 53 |
regional part of brain | 4.61e-17 | 53 |
adult organism | 2.20e-15 | 114 |
neural plate | 6.08e-15 | 82 |
presumptive neural plate | 6.08e-15 | 82 |
central nervous system | 8.19e-15 | 81 |
brain | 1.30e-14 | 68 |
future brain | 1.30e-14 | 68 |
nervous system | 2.38e-13 | 89 |
neurectoderm | 4.88e-13 | 86 |
regional part of forebrain | 4.90e-13 | 41 |
forebrain | 4.90e-13 | 41 |
anterior neural tube | 4.90e-13 | 41 |
future forebrain | 4.90e-13 | 41 |
pre-chordal neural plate | 1.47e-12 | 61 |
brain grey matter | 4.06e-11 | 34 |
gray matter | 4.06e-11 | 34 |
telencephalon | 4.48e-11 | 34 |
cerebral hemisphere | 6.91e-11 | 32 |
regional part of telencephalon | 2.94e-10 | 32 |
ecto-epithelium | 7.57e-10 | 104 |
regional part of cerebral cortex | 2.92e-09 | 22 |
neocortex | 2.14e-08 | 20 |
cerebral cortex | 2.42e-08 | 25 |
pallium | 2.42e-08 | 25 |
structure with developmental contribution from neural crest | 3.73e-08 | 132 |
tube | 6.92e-08 | 192 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.