FFCP PHASE1:Hg19::chr2:190043905..190043909,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000057!5.78e-09!75;CL:0000055!2.14e-07!180;CL:0002334!3.93e-07!12;CL:0002580!5.16e-07!3 | |ontology_enrichment_celltype=CL:0000057!5.78e-09!75;CL:0000055!2.14e-07!180;CL:0002334!3.93e-07!12;CL:0002580!5.16e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000138;2.19e-12;6!CL:0002569;2.59e-12;6!CL:0000153;1.04e-08;9!CL:0000447;1.04e-08;9!CL:0000081;2.55e-07;11 | |ontology_enrichment_celltype_v019=CL:0000138;2.19e-12;6!CL:0002569;2.59e-12;6!CL:0000153;1.04e-08;9!CL:0000447;1.04e-08;9!CL:0000081;2.55e-07;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000058,2.19e-12,6;CL:0000138,2.19e-12,6;CL:0002569,2.74e-12,6;CL:0000153,1.04e-08,9;CL:0000447,1.04e-08,9;CL:0000081,2.63e-07,11 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3371;1.23e-66;1!DOID:4549;1.23e-66;1!DOID:5861;1.23e-66;1!DOID:6496;1.23e-66;1!DOID:201;2.19e-12;6!DOID:0060100;2.19e-12;6 | |ontology_enrichment_disease_v019=DOID:3371;1.23e-66;1!DOID:4549;1.23e-66;1!DOID:5861;1.23e-66;1!DOID:6496;1.23e-66;1!DOID:201;2.19e-12;6!DOID:0060100;2.19e-12;6 | ||
|ontology_enrichment_disease_v019_2=DOID:3371,1.23e-66,1;DOID:4549,1.23e-66,1;DOID:5861,1.23e-66,1;DOID:6496,1.23e-66,1;DOID:201,2.19e-12,6;DOID:0060100,2.19e-12,6 | |||
|ontology_enrichment_uberon=UBERON:0001950!1.60e-14!20;UBERON:0002619!6.19e-13!22;UBERON:0000956!5.08e-11!25;UBERON:0000203!5.08e-11!25;UBERON:0001869!1.50e-10!32;UBERON:0001893!1.03e-09!34;UBERON:0002791!1.01e-08!33;UBERON:0002020!2.27e-08!34;UBERON:0003528!2.27e-08!34;UBERON:0000200!8.79e-08!6;UBERON:0002780!1.95e-07!41;UBERON:0001890!1.95e-07!41;UBERON:0006240!1.95e-07!41;UBERON:0001872!3.45e-07!5;UBERON:0003080!3.55e-07!42;UBERON:0000955!9.99e-07!69;UBERON:0006238!9.99e-07!69 | |ontology_enrichment_uberon=UBERON:0001950!1.60e-14!20;UBERON:0002619!6.19e-13!22;UBERON:0000956!5.08e-11!25;UBERON:0000203!5.08e-11!25;UBERON:0001869!1.50e-10!32;UBERON:0001893!1.03e-09!34;UBERON:0002791!1.01e-08!33;UBERON:0002020!2.27e-08!34;UBERON:0003528!2.27e-08!34;UBERON:0000200!8.79e-08!6;UBERON:0002780!1.95e-07!41;UBERON:0001890!1.95e-07!41;UBERON:0006240!1.95e-07!41;UBERON:0001872!3.45e-07!5;UBERON:0003080!3.55e-07!42;UBERON:0000955!9.99e-07!69;UBERON:0006238!9.99e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0002418;2.62e-23;3!UBERON:0004755;2.62e-23;3!UBERON:0002369;3.66e-23;3!UBERON:0001235;3.66e-23;3!UBERON:0006858;3.66e-23;3!UBERON:0003422;2.59e-12;6!UBERON:0003104;9.43e-11;7!UBERON:0009142;9.43e-11;7!UBERON:0002331;6.34e-08;10 | |ontology_enrichment_uberon_v019=UBERON:0002418;2.62e-23;3!UBERON:0004755;2.62e-23;3!UBERON:0002369;3.66e-23;3!UBERON:0001235;3.66e-23;3!UBERON:0006858;3.66e-23;3!UBERON:0003422;2.59e-12;6!UBERON:0003104;9.43e-11;7!UBERON:0009142;9.43e-11;7!UBERON:0002331;6.34e-08;10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002418,2.62e-23,3;UBERON:0004755,2.62e-23,3;UBERON:0002369,3.27e-23,3;UBERON:0001235,3.27e-23,3;UBERON:0006858,3.27e-23,3;UBERON:0003422,2.74e-12,6;UBERON:0002331,6.56e-08,10;UBERON:0000358,6.56e-08,10;UBERON:0000307,6.56e-08,10;UBERON:0000091,6.56e-08,10;UBERON:0000087,6.56e-08,10;UBERON:0007010,6.56e-08,10;UBERON:0007806,6.56e-08,10;UBERON:0008780,6.56e-08,10;UBERON:0005728,6.56e-08,10 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0.795285947051099,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.506522046658319,0.132409180813219,0,0.354668382198357,0,0,0.24666754841716,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0.206105058476878,0.257640540045629,0.18611685633159,0.168776332241266,0.194874010322397,0.252433774244115,0.0920498986422993,0,0.355009592516614,0,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,1.14861935834114,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0.207970861530807,0.356857977594324,0,0,0.300946099727719,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0.61384789315225,0.561320188866147,0.128139149255701,0.511707249066704,0.321707842287215,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0.54941678891006,0.165018999841176,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0,0,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69904730449319,0,0,0,0,0,0.994147647766298,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.85408696803251,0.225980740780532,0,0,0.189932387867636,0,0,0,0,0,0.80175617316141,0,0,0,0,0.135904206073614,0.209205692624666,0.101998217636322,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0.360299883542404,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0.326587360109409,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0.471612915298998,0,0,0,0,0,0,0,0.612691153526923,0.327872630709804,0,0,0.366078794705889,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0.53168342911599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0.138258436151731,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.0642292250964595,0,0.159633859057151,0.205116364240755,0,0.276629009856872,0,0,0,0,0,0,0,0,0.198916222116275,0.0752103283492573,0,0,0,0,0,0.270150338473579,0.781078098613847,0.413373593002368,0.380494861163441,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460409414939944,0,0,0.156986185701028,0,0,0,0,0,0,0,0.23248285073625,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0.951360726220549,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0.135982980381829,0,0,0.743990036333503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714193294391221,0,0.124149428591716,0,0,0.202117188958219,0,0,0,0,0.99798106963804,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0 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| ||
|short_description=p@chr2:190043905..190043909,- | |short_description=p@chr2:190043905..190043909,- | ||
}} | }} |
Revision as of 23:22, 18 November 2012
Short description: | p@chr2:190043905..190043909, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:190043905..190043909, - |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 2.19e-12 | 6 |
chondrocyte | 2.19e-12 | 6 |
mesenchymal stem cell of umbilical cord | 2.74e-12 | 6 |
GAG secreting cell | 1.04e-08 | 9 |
carbohydrate secreting cell | 1.04e-08 | 9 |
blood cell | 2.63e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
cartilage tissue | 2.62e-23 | 3 |
skeletal tissue | 2.62e-23 | 3 |
adrenal gland | 3.27e-23 | 3 |
adrenal cortex | 3.27e-23 | 3 |
adrenal/interrenal gland | 3.27e-23 | 3 |
mesenchyme of umbilical cord | 2.74e-12 | 6 |
umbilical cord | 6.56e-08 | 10 |
blastocyst | 6.56e-08 | 10 |
blastula | 6.56e-08 | 10 |
bilaminar disc | 6.56e-08 | 10 |
inner cell mass | 6.56e-08 | 10 |
cleaving embryo | 6.56e-08 | 10 |
connecting stalk | 6.56e-08 | 10 |
inner cell mass derived epiblast | 6.56e-08 | 10 |
extraembryonic mesoderm | 6.56e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.23e-66 | 1 |
extraosseous chondrosarcoma | 1.23e-66 | 1 |
myxoid chondrosarcoma | 1.23e-66 | 1 |
extraskeletal myxoid chondrosarcoma | 1.23e-66 | 1 |
connective tissue cancer | 2.19e-12 | 6 |
musculoskeletal system cancer | 2.19e-12 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
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Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.