FFCP PHASE1:Hg19::chr8:95229847..95229858,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0002127!2.66e-18!1;CL:0000914!2.66e-18!1;CL:0000911!2.66e-18!1;CL:0000814!2.66e-18!1;CL:0002042!2.66e-18!1;CL:0002039!2.66e-18!1;CL:0002040!2.66e-18!1;CL:0002041!2.66e-18!1;CL:0000893!7.98e-10!2;CL:0002489!7.98e-10!2;CL:0000809!7.98e-10!2;CL:0000808!7.98e-10!2;CL:0000894!7.98e-10!2;CL:0000806!7.98e-10!2;CL:0000807!7.98e-10!2;CL:0000805!7.98e-10!2;CL:0002425!7.98e-10!2;CL:0000842!8.15e-07!3;CL:0000623!8.62e-07!3;CL:0000825!8.62e-07!3 | |ontology_enrichment_celltype=CL:0002127!2.66e-18!1;CL:0000914!2.66e-18!1;CL:0000911!2.66e-18!1;CL:0000814!2.66e-18!1;CL:0002042!2.66e-18!1;CL:0002039!2.66e-18!1;CL:0002040!2.66e-18!1;CL:0002041!2.66e-18!1;CL:0000893!7.98e-10!2;CL:0002489!7.98e-10!2;CL:0000809!7.98e-10!2;CL:0000808!7.98e-10!2;CL:0000894!7.98e-10!2;CL:0000806!7.98e-10!2;CL:0000807!7.98e-10!2;CL:0000805!7.98e-10!2;CL:0002425!7.98e-10!2;CL:0000842!8.15e-07!3;CL:0000623!8.62e-07!3;CL:0000825!8.62e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002127;9.37e-99;1!CL:0000911;9.37e-99;1!CL:0000814;9.37e-99;1!CL:0000084;4.64e-17;25!CL:0000791;7.18e-07;18!CL:0000789;7.18e-07;18!CL:0002419;7.18e-07;18!CL:0000542;7.96e-07;53 | |ontology_enrichment_celltype_v019=CL:0002127;9.37e-99;1!CL:0000911;9.37e-99;1!CL:0000814;9.37e-99;1!CL:0000084;4.64e-17;25!CL:0000791;7.18e-07;18!CL:0000789;7.18e-07;18!CL:0002419;7.18e-07;18!CL:0000542;7.96e-07;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0002127,9.37e-99,1;CL:0000914,9.37e-99,1;CL:0000911,9.37e-99,1;CL:0000814,9.37e-99,1;CL:0002042,9.37e-99,1;CL:0002039,9.37e-99,1;CL:0002040,9.37e-99,1;CL:0002041,9.37e-99,1;CL:0000893,2.74e-50,2;CL:0002489,2.74e-50,2;CL:0000809,2.74e-50,2;CL:0000808,2.74e-50,2;CL:0000894,2.74e-50,2;CL:0000806,2.74e-50,2;CL:0000807,2.74e-50,2;CL:0000805,2.74e-50,2;CL:0002425,2.74e-50,2;CL:0000084,4.64e-17,25;CL:0000827,4.64e-17,25;CL:0000838,6.99e-09,52;CL:0000542,9.74e-09,53;CL:0000051,9.74e-09,53;CL:0000791,7.18e-07,18;CL:0000789,7.18e-07,18;CL:0002420,7.18e-07,18;CL:0002419,7.18e-07,18;CL:0000790,7.18e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002425;2.74e-50;2!CL:0000790;7.18e-07;18!CL:0000051;7.96e-07;53 | |ontology_enrichment_development_v019=CL:0002425;2.74e-50;2!CL:0000790;7.18e-07;18!CL:0000051;7.96e-07;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2531;3.80e-10;51!DOID:0060083;3.80e-10;51!DOID:1240;1.53e-08;39 | |ontology_enrichment_disease_v019=DOID:2531;3.80e-10;51!DOID:0060083;3.80e-10;51!DOID:1240;1.53e-08;39 | ||
|ontology_enrichment_disease_v019_2=DOID:1240,2.03e-11,39;DOID:2531,4.95e-09,51;DOID:0060083,4.95e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0002106!1.40e-22!3;UBERON:0004854!1.40e-22!3;UBERON:0009034!1.40e-22!3;UBERON:0002095!1.40e-22!3;UBERON:0004782!1.40e-22!3;UBERON:0003281!1.40e-22!3;UBERON:0009664!1.40e-22!3;UBERON:0002296!1.40e-22!3;UBERON:0005602!1.40e-22!3;UBERON:0001179!1.40e-22!3;UBERON:0006293!1.40e-22!3;UBERON:0004177!8.73e-22!7;UBERON:0000029!3.75e-18!1;UBERON:0001154!5.26e-18!1;UBERON:0001153!5.26e-18!1;UBERON:0005057!1.86e-10!26;UBERON:0000945!4.36e-09!8;UBERON:0010039!4.36e-09!8;UBERON:0001155!2.85e-08!9;UBERON:0005409!1.40e-07!35;UBERON:0000059!6.35e-07!11 | |ontology_enrichment_uberon=UBERON:0002106!1.40e-22!3;UBERON:0004854!1.40e-22!3;UBERON:0009034!1.40e-22!3;UBERON:0002095!1.40e-22!3;UBERON:0004782!1.40e-22!3;UBERON:0003281!1.40e-22!3;UBERON:0009664!1.40e-22!3;UBERON:0002296!1.40e-22!3;UBERON:0005602!1.40e-22!3;UBERON:0001179!1.40e-22!3;UBERON:0006293!1.40e-22!3;UBERON:0004177!8.73e-22!7;UBERON:0000029!3.75e-18!1;UBERON:0001154!5.26e-18!1;UBERON:0001153!5.26e-18!1;UBERON:0005057!1.86e-10!26;UBERON:0000945!4.36e-09!8;UBERON:0010039!4.36e-09!8;UBERON:0001155!2.85e-08!9;UBERON:0005409!1.40e-07!35;UBERON:0000059!6.35e-07!11 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.56e-26,4;UBERON:0005058,5.56e-26,4;UBERON:0009113,5.56e-26,4;UBERON:0003295,5.56e-26,4;UBERON:0005562,5.56e-26,4;UBERON:0003351,7.67e-18,6;UBERON:0004177,1.65e-15,7;UBERON:0005057,1.65e-15,7;UBERON:0000974,2.73e-11,10;UBERON:0003408,2.73e-11,10;UBERON:0001042,2.73e-11,10;UBERON:0009145,2.73e-11,10;UBERON:0006562,2.16e-10,11;UBERON:0009722,2.16e-10,11;UBERON:0007690,2.16e-10,11;UBERON:0008814,7.18e-07,18 | |||
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|short_description=p5@CDH17 | |short_description=p5@CDH17 | ||
}} | }} |
Revision as of 02:17, 21 November 2012
Short description: | p5@CDH17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_CDH17_5end |
Coexpression cluster: | C121_NK_Natural_CD8_CD4_anaplastic_chronic_B |
Association with transcript: | -316bp_to_ENST00000450165, NM_001144663, uc011lgp.1_5end |
EntrezGene: | CDH17 |
HGNC: | 1756 |
UniProt: | Q12864B2R778 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 9.37e-99 | 1 |
immature NK T cell | 9.37e-99 | 1 |
effector T cell | 9.37e-99 | 1 |
mature NK T cell | 9.37e-99 | 1 |
immature NK T cell stage IV | 9.37e-99 | 1 |
immature NK T cell stage I | 9.37e-99 | 1 |
immature NK T cell stage II | 9.37e-99 | 1 |
immature NK T cell stage III | 9.37e-99 | 1 |
thymocyte | 2.74e-50 | 2 |
double negative thymocyte | 2.74e-50 | 2 |
double-positive, alpha-beta thymocyte | 2.74e-50 | 2 |
DN4 thymocyte | 2.74e-50 | 2 |
DN1 thymic pro-T cell | 2.74e-50 | 2 |
DN2 thymocyte | 2.74e-50 | 2 |
DN3 thymocyte | 2.74e-50 | 2 |
immature single positive thymocyte | 2.74e-50 | 2 |
early T lineage precursor | 2.74e-50 | 2 |
T cell | 4.64e-17 | 25 |
pro-T cell | 4.64e-17 | 25 |
lymphoid lineage restricted progenitor cell | 6.99e-09 | 52 |
lymphocyte | 9.74e-09 | 53 |
common lymphoid progenitor | 9.74e-09 | 53 |
mature alpha-beta T cell | 7.18e-07 | 18 |
alpha-beta T cell | 7.18e-07 | 18 |
immature T cell | 7.18e-07 | 18 |
mature T cell | 7.18e-07 | 18 |
immature alpha-beta T cell | 7.18e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
thymus | 5.56e-26 | 4 |
hemolymphoid system gland | 5.56e-26 | 4 |
thymic region | 5.56e-26 | 4 |
pharyngeal gland | 5.56e-26 | 4 |
thymus primordium | 5.56e-26 | 4 |
pharyngeal epithelium | 7.67e-18 | 6 |
hemopoietic organ | 1.65e-15 | 7 |
immune organ | 1.65e-15 | 7 |
neck | 2.73e-11 | 10 |
gland of gut | 2.73e-11 | 10 |
chordate pharynx | 2.73e-11 | 10 |
pharyngeal region of foregut | 2.73e-11 | 10 |
pharynx | 2.16e-10 | 11 |
entire pharyngeal arch endoderm | 2.16e-10 | 11 |
early pharyngeal endoderm | 2.16e-10 | 11 |
pharyngeal arch system | 7.18e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
leukemia | 2.03e-11 | 39 |
hematologic cancer | 4.95e-09 | 51 |
immune system cancer | 4.95e-09 | 51 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.