Personal tools

Coexpression cluster:C456: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 8: Line 8:
|tfbs_overrepresentation=0.325835,0.358133,0.0503268,0.301302,0.0835995,0.710442,0.27557,0.75089,0.216481,0.173845,0.301378,0.558438,0.453545,0.259616,0.116294,0.374118,0.306244,0.5314,0.0610685,0.567681,0.0698442,0.647608,0.0258918,0.000952239,0.267565,0.105483,0.821469,0.154911,0.00114968,0.0063043,0.0284799,0.58852,0.124917,0.000406423,0.0916742,0.476491,0.999806,0.275353,0.609517,0.397244,0.524798,0.167018,0.0055656,0.188983,0.244051,0.23716,0.033496,0.0171466,0.579015,0.612276,0.0361598,0.0638412,0.413445,0.511193,0.0823349,0.0341501,0.565537,0.0331619,0.450152,0.19776,0.0207614,0.694797,2.88536e-05,0.439675,0.0646633,0.316087,0.0437024,0.0765383,0.00469181,0.738267,0.273204,0.00193342,0.032206,0.606354,0.0535436,0.118929,0.17128,0.0432723,0.00292235,0.0519793,0.00687234,0.562637,0.272749,0.22555,0.112229,0.627438,0.385961,0.0961515,0.816198,0.00145742,0.481853,0.311314,0.168099,0.0501356,0.480321,0.591852,0.623289,0.345742,0.160606,0.210787,0.352194,0.215164,0.309028,0.0319617,0.0373894,0.26395,0.092786,0.0348358,0.680845,0.899852,0.434982,0.224036,0.695152,0.122654,0.542784,0.222594,0.139883,0.347995,0.0255718,0.473831,0.151587,0.0344494,0.669479,0.141244,0.0462743,0.417706,0.154816,0.103534,0.476021,0.287384,0.362663,0.434705,0.350835,0.155517,0.0777216,0.567835,0.388476,0.34128,0.218379,0.0286445,0.155453,0.000597576,0.0278951,0.353119,0.49799,0.40951,0.533761,0.00433507,0.0350187,0.0157662,0.488629,0.679366,0.181597,0.179278,0.273911,0.600304,0.112064,0.0441876,0.0586993,0.222432,0.013065,0.167814,0.597281,0.690485,0.903952,0.0129686,0.258891,0.0801376,0.260712,0.0221807,0.766021,0.296085,0.00746206,0.335116,0.457152,0.153115,0.670073,0.432615,0.00368418,0.0297054,0.718749,0.248827,0.184361,0.227756,0.429712,0.23772,0.00421334,0.00362297,0.469733,0.752898,0.202426,0.0682873,0.617851,0.851232,0.583813,0.297838,0.0228737,0.366176,0.401707,0.209969,0.0324591,0.36673,0.205196,0.0012793,0.0947655,0.0727417,0.0889698,0.340184,0.816282,0.422116,0.291293,0.554354,0.612123,0.5846,0.00215348,0.742849,0.731625,0.184154,0.379454,0.046999,0.0274362,0.0590667,0.711851,0.724056,0.430323,0.000572269,0.665879,0.482751,0.0113558,0.364245,0.583473,0.150744,0.269067,0.442137,0.522637,0.511981,0.0498547,0.000531041,0.729971,0.262254,0.0175342,0.95705,0.0417925,0.00412519,0.0639373,0.660105,0.129703,0.215893,0.13212,0.0140962,0.719257,0.777235,0.192873,0.175699,0.175876,0.36456,0.564774,0.230541,0.0990912,0.313219,0.374223,0.00333151,0.729674,0.634037,0.227071,0.462045,0.462458,0.158686,0.602056,0.437754,0.689871,0.380895,0.634697,0.986977,0.143456,0.247571,0.0204131,0.319657,0.00292647,0.966778,0.130028,0.00401592,0.0357584,0.9137,0.000289457,0.591345,0.0750629,0.148408,0.000242321,0.000125094,0.0654156,6.00008e-05,0.311923,0.00328326,0.0285592,0.403363,0.000697143,0.249688,0.186955,0.884983,0.311467,0.0087284,0.00475158,4.39596e-07,0.0172287,0.911674,0.21091,0.000251705,0.00261946,0.00930414,0.00095092,0.176995,0.0882066,0.000204483,0.625744,4.08496e-09,0.35941,0.862984,0.00654124,0.000806065,0.0516043,4.53723e-05,0.30687,0.553343,0.406928,0.805827,1.02261e-05,0.00768059,0.000873737,0.00454544,0.151293,0.18562,0.207803,0.00127328,2.71356e-06,0.011924,0.060277,0.0572938,0.00204958,0.00413359,0.195513,0.807961,0.315044,0.683155,0.13903,0.778229,0.00145989,0.00532825,0.408669,0.0160904,0.000294087,0.0886095,0.456343,0.000333108,0.0372042,0.688556,0.0108907,0.398881,0.107834,0.000920023,0.498237,0.006104,0.113691,0.200151,0.00450474,0.000119236,1.06912e-06,0.0753567,0.0106173,0.144779,0.374712,0.287149,0.0202334,0.000168028,0.365996,0.477619,0.404153,0.00487916,0.00453258,0.341581,0.109274,0.0030938,0.337856,0.0945114,0.661335,0.0576409,0.565844,6.87714e-07,0.080851,0.00181236,0.0943249,0.0519234,0.0577485,0.00285344,0.0206961,0.974008,0.000286651,0.318195,0.110571,0.288054,0.671819,0.271439,0.000261566,0.167355,7.03677e-08,0.295122,0.00506537,0.180752,0.286935,0.00113566,0.0347007,0.0454371,0.00382597,2.17534e-05,0.0018423,0.00629802,0.0814615,0.000886026,0.789855,0.0130085,0.00805913,0.633807,0.122086,0.187289,0.0201309,0.0519716,0.483979,0.575585,0.0922413,0.186256,0.093471,0.00141509,0.00064179,0.191347,0.141974,0.0988466,0.308667,0.00622434,0.177144,0.0406653,0.32303,0.00851465,0.85603,0.0205668,0.495743,0.362586,0.636087,0.032619,0.000413507,6.30311e-07,0.000114474,0.00353984,0.332568,0.224558,0.593459,0.0238893,0.0995462,0.343055,0.208498,0.448727,0.0711192,0.316674,0.000136525,0.0277447,0.0702924,0.799457,0.0735833,0.581262,0.457412,0.0429905,0.275059,0.629028,0.654328,0.201669,0.678574,0.082888,0.97046,0.124126,0.276452,0.222729,0.491056,0.294642,0.744085,0.590347,0.555091,0.499045,0.143748,0.365046,0.0519549,0.0435795,0.0281818,0.0744116,0.0038813,0.0980432,0.793743,0.602776,0.0552266,0.133415,0.0920817,0.771192,0.0572359,0.541981,0.345521,0.0782729,0.0877712,0.784215,0.303795,0.226016,0.978071,0.632996,0.0149639,0.190034,0.0127196,0.48964,0.519965,0.0796581,0.281443,0.564062,0.213114,0.0347636,0.0536413,0.00103941,0.254287,0.200598,0.276871,0.283946,0.0600584,0.512357,0.0354719,0.0240933,0.528417,0.138282,0.252063,0.154704,0.343679,0.228785,0.969789,0.661529,0.102243,0.392459,0.00216578,0.113103,0.458088,0.43897,0.141583,0.00560175,0.339065,0.448611,0.345603,0.268637,0.227239,0.0349055,0.365335,0.745672,0.228558,0.307623,0.411623,0.966398,0.0258471,0.821496,0.111598,0.255701,0.363008,0.563665,6.39632e-05,0.57057,0.57461,0.650854,0.19169,0.693689,0.681803,0.25216,0.488856,0.339703,0.680436,0.63204,0.0102366,0.00109881,0.275435,0.07953,0.589813,0.708689,0.440456,0.16372,0.0258091,0.772249,0.799714,0.000218016,0.307747,8.00283e-05,0.670883,0.0321331,0.933911,0.0408166,0.299082,0.518598,0.986762,0.281019,0.118969,0.208536,0.635476,0.0865669,0.852362,0.634918,0.323182,0.535947,0.313695,0.373769,0.437733,0.513782,0.680456,0.0272479,0.431768,0.424916,0.927855,0.520281,0.268423,0.109415,0.0680419,0.0219461,0.000724131,0.929547,0.352624,0.300632,0.880151,0.00130053,0.00335371,0.000400624,0.418772,0.0407929,0.00448123,0.0296269,0.0774381,0.756237,0.991901,1,0.816546,0.270738,0.0534063,0.400288,0.570129,0.31035,0.522361,0.239907,0.0029121,0.0468779,0.211593,0.413957,0.121949,0.7053,0.245537,0.280191,0.286576,0.333976,0.589189,0.511034,0.16358,0.00958998,0.0113879,0.350591,0.048919,0.439833,0.708421,0.702487,0.796107,0.0368284,0.544221,0.555148,0.000603988,1.96145e-05,0.339394,0.0826153,0.461193,0.692573,0.994205,0.0375451,0.104811,0.158223,0.365935,0.681083,0.119916,0.528269,0.0369153,0.397428,0.0758698,0.294506,0.850285,0.16592,0.0139646,0.238278,0.474033,0.566136,0.585442,0.583744,0.780173,0.411178,0.518458,0.00834622,0.0621638,0.670632,0.00800529,0.373084,0.55183,0.220176,0.0158946,0.390076,0.501889,0.0325289,0.387164,0.453187,0.463428,0.7768,0.353939,0.29492,0.429406,0.360259,0.616137,0.422208,0.109581,0.854401,0.978412,0.41526,0.0304084,0.900541,0.643161,0.27808,0.0900719,0.906293,0.850846,0.443307,0.189893,0.0141831,0.22515,0.0119248,0.000216943,0.0236403,0.000187081,0.220099,0.00493236,4.10657e-05,0.894307,0.27801,0.611689,0.347567,0.0604672,0.236575,0.299162,0.36833,0.0352725,0.0314565,0.0995455,0.99997,0.999164,0.293349,0.0942088,0.00103961,9.54652e-05,0.444927,0.887671,0.00116758,0.0633542,0.24285,6.96505e-05,0.0912104,0.453554,0.103653,0.701157,0.801724,0.840972,0.00192588,0.00179096,0.870653,0.0934509,0.0323692,0.183988,0.228953,0.000390161,0.326261,0.0460316,0.136008,0.948047,0.00288002,0.166721,0.991419,0.930458,0.0152919,0.642032,0.0884323,0.227265,0.502931,0.268551,0.886289,0.98293,0.386337,0.0687831,0.0377725,0.103088,0.0998726,0.170289,0.763495,0.00586352,0.00233426,0.572529,0.609109,0.0129046,0.940686,0.023146,0.769609,0.228066,0.863373,0.274336,0.00019062,0.441625,0.160527,0.0558653,0.585859,0.259376,9.79314e-05,0.000519105,0.999423,0.338055,0.549316,0.0199703,0.0480937,0.832582,0.116419,0.450008,0.0903198,0.0152397,0.0988623,0.711391,0.011984,0.22092,0.134734,0.528169,0.349805,0.756466,0.569797,0.0600099,0.0235282,0.00215222,0.053377,8.01618e-05,0.160792,0.642465,0.861121,0.49688,0.678738,0.000258284,0.98695,0.0428855,0.213331,0.216794,0.500856,0.329676,1.37957e-05,0.0555911,2.24924e-05,0.00564485,1.23864e-06,0.267957,0.164982,0.0284908,0.00236211,0.00682992,0.112631,0.0404073,0.799855,3.72565e-05,0.0924484,0.666773,0.0203121,0.470741,2.33933e-12,0.0460375,0.0221076,0.0146022,0.209021,0.0554589,0.0908195,0.150435,0.000136772,0.0186757,8.01069e-07,0.480317,0.0896253,0.0114756,0.00026681,0.0255569,0.124625,0.00396064,0.0911321,0.000684177,0.448301,0.000807015,0.238853,0.222365,7.20598e-07,0.0247556,0.00103515,0.421513,0.0277044,0.143128,0.00527895,0.375064,0.111402,0.509919,0.499526,0.168048,7.60202e-05,0.0652508,0.00322568,4.96383e-07,0.0081241,0.0335722,0.178723,0.0224873,0.839676,0.842777,0.367511,0.000542669,0.00259581,5.0719e-05,0.00469214,0.0740127,0.485187,0.215723,0.0364117,0.621398,0.0600405,0.000759354,0.908919,0.140638,0.0209278,0.819768,3.31407e-07,0.841828,0.400215,0.030542,0.00882213,0.220246,0.684883,0.127225,0.372236,0.126451,0.155821,0.250143,0.394374,0.325066,0.289576,0.0025568,0.0266076,0.00532655,0.00868183,0.241843,0.533195,0.0107812,0.0755353,1.7978e-05,0.00957844,0.83879,0.0778086,0.0173561,0.378482,1.02208e-06,0.0608108,0.365213,0.372277,5.68212e-07,0.0360423,0.253266,0.775532,0.191951,0.423381,0.375465,0.185667,0.235174,0.828673,0.244363,0.674364,0.792532,0.350607,0.228967,0.845123,0.342719,0.751721,5.47839e-05,0.668525,0.000271328,0.598617,0.13104,0.643122,0.0701456,0.00296933,0.00304168,0.0567765,0.172547,0.492966,0.0587978,0.910958,0.538584,0.131647,0.492759,0.201218,0.332379,0.0629891,0.0339042,0.448806,0.038029,0.333052,0.000710057,0.384039,0.51938,0.197397,0.310143,0.00506774,0.462993,0.531068,0.0860366,0.614572,0.38369,0.194895,0.0911975,0.00300872,0.268143,0.571625,0.281669,0.398417,0.497652,0.24008,0.287503,0.236657,1.65557e-05,6.16568e-08,0.956094,0.308577,0.188465,1.4925e-09,0.226337,1.11813e-07,0.0171243,0.00168899,0.0156566,0.231008,0.0274653,0.00424405,0.723167,0.00786626,0.00657578,0.106106,0.050734,0.00294963,0.0135908,0.0366793,0.000688535,0.000339936,0.0012918,0.0726398,0.000930027,0.00369844,0.352859,0.147331,0.0120877,0.513491,2.25628e-09,0.0421844,0.818801,0.522463,0.482562,3.22794e-12,0.0516394,0.361989,0.409443,0.417806,0.407656,0.542039,0.000660327,0.00341676,0.0387209,0.0351038,0.360365,0.504008,4.10435e-05
|tfbs_overrepresentation=0.325835,0.358133,0.0503268,0.301302,0.0835995,0.710442,0.27557,0.75089,0.216481,0.173845,0.301378,0.558438,0.453545,0.259616,0.116294,0.374118,0.306244,0.5314,0.0610685,0.567681,0.0698442,0.647608,0.0258918,0.000952239,0.267565,0.105483,0.821469,0.154911,0.00114968,0.0063043,0.0284799,0.58852,0.124917,0.000406423,0.0916742,0.476491,0.999806,0.275353,0.609517,0.397244,0.524798,0.167018,0.0055656,0.188983,0.244051,0.23716,0.033496,0.0171466,0.579015,0.612276,0.0361598,0.0638412,0.413445,0.511193,0.0823349,0.0341501,0.565537,0.0331619,0.450152,0.19776,0.0207614,0.694797,2.88536e-05,0.439675,0.0646633,0.316087,0.0437024,0.0765383,0.00469181,0.738267,0.273204,0.00193342,0.032206,0.606354,0.0535436,0.118929,0.17128,0.0432723,0.00292235,0.0519793,0.00687234,0.562637,0.272749,0.22555,0.112229,0.627438,0.385961,0.0961515,0.816198,0.00145742,0.481853,0.311314,0.168099,0.0501356,0.480321,0.591852,0.623289,0.345742,0.160606,0.210787,0.352194,0.215164,0.309028,0.0319617,0.0373894,0.26395,0.092786,0.0348358,0.680845,0.899852,0.434982,0.224036,0.695152,0.122654,0.542784,0.222594,0.139883,0.347995,0.0255718,0.473831,0.151587,0.0344494,0.669479,0.141244,0.0462743,0.417706,0.154816,0.103534,0.476021,0.287384,0.362663,0.434705,0.350835,0.155517,0.0777216,0.567835,0.388476,0.34128,0.218379,0.0286445,0.155453,0.000597576,0.0278951,0.353119,0.49799,0.40951,0.533761,0.00433507,0.0350187,0.0157662,0.488629,0.679366,0.181597,0.179278,0.273911,0.600304,0.112064,0.0441876,0.0586993,0.222432,0.013065,0.167814,0.597281,0.690485,0.903952,0.0129686,0.258891,0.0801376,0.260712,0.0221807,0.766021,0.296085,0.00746206,0.335116,0.457152,0.153115,0.670073,0.432615,0.00368418,0.0297054,0.718749,0.248827,0.184361,0.227756,0.429712,0.23772,0.00421334,0.00362297,0.469733,0.752898,0.202426,0.0682873,0.617851,0.851232,0.583813,0.297838,0.0228737,0.366176,0.401707,0.209969,0.0324591,0.36673,0.205196,0.0012793,0.0947655,0.0727417,0.0889698,0.340184,0.816282,0.422116,0.291293,0.554354,0.612123,0.5846,0.00215348,0.742849,0.731625,0.184154,0.379454,0.046999,0.0274362,0.0590667,0.711851,0.724056,0.430323,0.000572269,0.665879,0.482751,0.0113558,0.364245,0.583473,0.150744,0.269067,0.442137,0.522637,0.511981,0.0498547,0.000531041,0.729971,0.262254,0.0175342,0.95705,0.0417925,0.00412519,0.0639373,0.660105,0.129703,0.215893,0.13212,0.0140962,0.719257,0.777235,0.192873,0.175699,0.175876,0.36456,0.564774,0.230541,0.0990912,0.313219,0.374223,0.00333151,0.729674,0.634037,0.227071,0.462045,0.462458,0.158686,0.602056,0.437754,0.689871,0.380895,0.634697,0.986977,0.143456,0.247571,0.0204131,0.319657,0.00292647,0.966778,0.130028,0.00401592,0.0357584,0.9137,0.000289457,0.591345,0.0750629,0.148408,0.000242321,0.000125094,0.0654156,6.00008e-05,0.311923,0.00328326,0.0285592,0.403363,0.000697143,0.249688,0.186955,0.884983,0.311467,0.0087284,0.00475158,4.39596e-07,0.0172287,0.911674,0.21091,0.000251705,0.00261946,0.00930414,0.00095092,0.176995,0.0882066,0.000204483,0.625744,4.08496e-09,0.35941,0.862984,0.00654124,0.000806065,0.0516043,4.53723e-05,0.30687,0.553343,0.406928,0.805827,1.02261e-05,0.00768059,0.000873737,0.00454544,0.151293,0.18562,0.207803,0.00127328,2.71356e-06,0.011924,0.060277,0.0572938,0.00204958,0.00413359,0.195513,0.807961,0.315044,0.683155,0.13903,0.778229,0.00145989,0.00532825,0.408669,0.0160904,0.000294087,0.0886095,0.456343,0.000333108,0.0372042,0.688556,0.0108907,0.398881,0.107834,0.000920023,0.498237,0.006104,0.113691,0.200151,0.00450474,0.000119236,1.06912e-06,0.0753567,0.0106173,0.144779,0.374712,0.287149,0.0202334,0.000168028,0.365996,0.477619,0.404153,0.00487916,0.00453258,0.341581,0.109274,0.0030938,0.337856,0.0945114,0.661335,0.0576409,0.565844,6.87714e-07,0.080851,0.00181236,0.0943249,0.0519234,0.0577485,0.00285344,0.0206961,0.974008,0.000286651,0.318195,0.110571,0.288054,0.671819,0.271439,0.000261566,0.167355,7.03677e-08,0.295122,0.00506537,0.180752,0.286935,0.00113566,0.0347007,0.0454371,0.00382597,2.17534e-05,0.0018423,0.00629802,0.0814615,0.000886026,0.789855,0.0130085,0.00805913,0.633807,0.122086,0.187289,0.0201309,0.0519716,0.483979,0.575585,0.0922413,0.186256,0.093471,0.00141509,0.00064179,0.191347,0.141974,0.0988466,0.308667,0.00622434,0.177144,0.0406653,0.32303,0.00851465,0.85603,0.0205668,0.495743,0.362586,0.636087,0.032619,0.000413507,6.30311e-07,0.000114474,0.00353984,0.332568,0.224558,0.593459,0.0238893,0.0995462,0.343055,0.208498,0.448727,0.0711192,0.316674,0.000136525,0.0277447,0.0702924,0.799457,0.0735833,0.581262,0.457412,0.0429905,0.275059,0.629028,0.654328,0.201669,0.678574,0.082888,0.97046,0.124126,0.276452,0.222729,0.491056,0.294642,0.744085,0.590347,0.555091,0.499045,0.143748,0.365046,0.0519549,0.0435795,0.0281818,0.0744116,0.0038813,0.0980432,0.793743,0.602776,0.0552266,0.133415,0.0920817,0.771192,0.0572359,0.541981,0.345521,0.0782729,0.0877712,0.784215,0.303795,0.226016,0.978071,0.632996,0.0149639,0.190034,0.0127196,0.48964,0.519965,0.0796581,0.281443,0.564062,0.213114,0.0347636,0.0536413,0.00103941,0.254287,0.200598,0.276871,0.283946,0.0600584,0.512357,0.0354719,0.0240933,0.528417,0.138282,0.252063,0.154704,0.343679,0.228785,0.969789,0.661529,0.102243,0.392459,0.00216578,0.113103,0.458088,0.43897,0.141583,0.00560175,0.339065,0.448611,0.345603,0.268637,0.227239,0.0349055,0.365335,0.745672,0.228558,0.307623,0.411623,0.966398,0.0258471,0.821496,0.111598,0.255701,0.363008,0.563665,6.39632e-05,0.57057,0.57461,0.650854,0.19169,0.693689,0.681803,0.25216,0.488856,0.339703,0.680436,0.63204,0.0102366,0.00109881,0.275435,0.07953,0.589813,0.708689,0.440456,0.16372,0.0258091,0.772249,0.799714,0.000218016,0.307747,8.00283e-05,0.670883,0.0321331,0.933911,0.0408166,0.299082,0.518598,0.986762,0.281019,0.118969,0.208536,0.635476,0.0865669,0.852362,0.634918,0.323182,0.535947,0.313695,0.373769,0.437733,0.513782,0.680456,0.0272479,0.431768,0.424916,0.927855,0.520281,0.268423,0.109415,0.0680419,0.0219461,0.000724131,0.929547,0.352624,0.300632,0.880151,0.00130053,0.00335371,0.000400624,0.418772,0.0407929,0.00448123,0.0296269,0.0774381,0.756237,0.991901,1,0.816546,0.270738,0.0534063,0.400288,0.570129,0.31035,0.522361,0.239907,0.0029121,0.0468779,0.211593,0.413957,0.121949,0.7053,0.245537,0.280191,0.286576,0.333976,0.589189,0.511034,0.16358,0.00958998,0.0113879,0.350591,0.048919,0.439833,0.708421,0.702487,0.796107,0.0368284,0.544221,0.555148,0.000603988,1.96145e-05,0.339394,0.0826153,0.461193,0.692573,0.994205,0.0375451,0.104811,0.158223,0.365935,0.681083,0.119916,0.528269,0.0369153,0.397428,0.0758698,0.294506,0.850285,0.16592,0.0139646,0.238278,0.474033,0.566136,0.585442,0.583744,0.780173,0.411178,0.518458,0.00834622,0.0621638,0.670632,0.00800529,0.373084,0.55183,0.220176,0.0158946,0.390076,0.501889,0.0325289,0.387164,0.453187,0.463428,0.7768,0.353939,0.29492,0.429406,0.360259,0.616137,0.422208,0.109581,0.854401,0.978412,0.41526,0.0304084,0.900541,0.643161,0.27808,0.0900719,0.906293,0.850846,0.443307,0.189893,0.0141831,0.22515,0.0119248,0.000216943,0.0236403,0.000187081,0.220099,0.00493236,4.10657e-05,0.894307,0.27801,0.611689,0.347567,0.0604672,0.236575,0.299162,0.36833,0.0352725,0.0314565,0.0995455,0.99997,0.999164,0.293349,0.0942088,0.00103961,9.54652e-05,0.444927,0.887671,0.00116758,0.0633542,0.24285,6.96505e-05,0.0912104,0.453554,0.103653,0.701157,0.801724,0.840972,0.00192588,0.00179096,0.870653,0.0934509,0.0323692,0.183988,0.228953,0.000390161,0.326261,0.0460316,0.136008,0.948047,0.00288002,0.166721,0.991419,0.930458,0.0152919,0.642032,0.0884323,0.227265,0.502931,0.268551,0.886289,0.98293,0.386337,0.0687831,0.0377725,0.103088,0.0998726,0.170289,0.763495,0.00586352,0.00233426,0.572529,0.609109,0.0129046,0.940686,0.023146,0.769609,0.228066,0.863373,0.274336,0.00019062,0.441625,0.160527,0.0558653,0.585859,0.259376,9.79314e-05,0.000519105,0.999423,0.338055,0.549316,0.0199703,0.0480937,0.832582,0.116419,0.450008,0.0903198,0.0152397,0.0988623,0.711391,0.011984,0.22092,0.134734,0.528169,0.349805,0.756466,0.569797,0.0600099,0.0235282,0.00215222,0.053377,8.01618e-05,0.160792,0.642465,0.861121,0.49688,0.678738,0.000258284,0.98695,0.0428855,0.213331,0.216794,0.500856,0.329676,1.37957e-05,0.0555911,2.24924e-05,0.00564485,1.23864e-06,0.267957,0.164982,0.0284908,0.00236211,0.00682992,0.112631,0.0404073,0.799855,3.72565e-05,0.0924484,0.666773,0.0203121,0.470741,2.33933e-12,0.0460375,0.0221076,0.0146022,0.209021,0.0554589,0.0908195,0.150435,0.000136772,0.0186757,8.01069e-07,0.480317,0.0896253,0.0114756,0.00026681,0.0255569,0.124625,0.00396064,0.0911321,0.000684177,0.448301,0.000807015,0.238853,0.222365,7.20598e-07,0.0247556,0.00103515,0.421513,0.0277044,0.143128,0.00527895,0.375064,0.111402,0.509919,0.499526,0.168048,7.60202e-05,0.0652508,0.00322568,4.96383e-07,0.0081241,0.0335722,0.178723,0.0224873,0.839676,0.842777,0.367511,0.000542669,0.00259581,5.0719e-05,0.00469214,0.0740127,0.485187,0.215723,0.0364117,0.621398,0.0600405,0.000759354,0.908919,0.140638,0.0209278,0.819768,3.31407e-07,0.841828,0.400215,0.030542,0.00882213,0.220246,0.684883,0.127225,0.372236,0.126451,0.155821,0.250143,0.394374,0.325066,0.289576,0.0025568,0.0266076,0.00532655,0.00868183,0.241843,0.533195,0.0107812,0.0755353,1.7978e-05,0.00957844,0.83879,0.0778086,0.0173561,0.378482,1.02208e-06,0.0608108,0.365213,0.372277,5.68212e-07,0.0360423,0.253266,0.775532,0.191951,0.423381,0.375465,0.185667,0.235174,0.828673,0.244363,0.674364,0.792532,0.350607,0.228967,0.845123,0.342719,0.751721,5.47839e-05,0.668525,0.000271328,0.598617,0.13104,0.643122,0.0701456,0.00296933,0.00304168,0.0567765,0.172547,0.492966,0.0587978,0.910958,0.538584,0.131647,0.492759,0.201218,0.332379,0.0629891,0.0339042,0.448806,0.038029,0.333052,0.000710057,0.384039,0.51938,0.197397,0.310143,0.00506774,0.462993,0.531068,0.0860366,0.614572,0.38369,0.194895,0.0911975,0.00300872,0.268143,0.571625,0.281669,0.398417,0.497652,0.24008,0.287503,0.236657,1.65557e-05,6.16568e-08,0.956094,0.308577,0.188465,1.4925e-09,0.226337,1.11813e-07,0.0171243,0.00168899,0.0156566,0.231008,0.0274653,0.00424405,0.723167,0.00786626,0.00657578,0.106106,0.050734,0.00294963,0.0135908,0.0366793,0.000688535,0.000339936,0.0012918,0.0726398,0.000930027,0.00369844,0.352859,0.147331,0.0120877,0.513491,2.25628e-09,0.0421844,0.818801,0.522463,0.482562,3.22794e-12,0.0516394,0.361989,0.409443,0.417806,0.407656,0.542039,0.000660327,0.00341676,0.0387209,0.0351038,0.360365,0.504008,4.10435e-05
|tfbs_overrepresentation_for_novel_motifs=0.0942734,0.000416561,0.0904779,1.0012,1.35524,0.518467,0.226953,0.502803,0.495015,0.016196,0.155105,0.258748,0.0724758,0.624423,1.86991,0.276011,0.401017,3.89098,0.0183131,0.25119,0.0905079,0.00629905,0.169484,0.516065,0.742963,0.275879,0.154326,0.168077,0.0717257,0.269248,0.436612,1.10344,0.0360115,0.374316,0.0554298,0.443344,0.0541423,0.175318,0.38935,0.0930851,0.445121,0.131762,1.76266,1.86076,0.389103,0.106689,0.227736,0.148323,1.32463,0.251047,0.286755,0.236257,0.178341,0.49846,0.635443,0.220828,0.256602,0.197918,0.130563,0.197226,0.467239,0.22944,0.266076,0.377975,0.242486,0.349807,0.716956,1.06805,1.08432,0.911622,0.124048,1.20366,0.0256534,0.633615,1.23827,0.0598881,0.13996,0.364079,1.07834,0.35946,2.30215,0.377089,0.242227,0.511606,0.586887,0.000111344,0.0173351,0.12387,0.306981,1.1648,0.804514,0.562601,0.446434,0.627248,0.0706505,1.04013,0.399529,0.483243,0.310601,0.877456,0.0456482,0.441596,0.47839,0.404088,0.340503,0.15226,0.39086,0.618652,0.114869,0.0632414,0.0962642,0.475985,0.0876862,0.161084,0.759328,0.437533,0.00180706,0.140827,0.347912,0.154062,0.626054,0.305079,0.172748,0.698687,0.863933,0.956184,0.222409,0.450719,0.66511,0.166515,0.563221,0.143305,0.678365,0.248069,0.81669,0.420713,1.36399,0.168444,0.776656,1.61314,1.21607,0.741657,1.19021,0.480173,0.341918,1.06736,0.875921,1.45545,2.56592,0.147439,0.00359134,0.00102667,0.563563,0.470621,1.21104,0.940968,0.294363,0.0641085,0.368557,0.0993076,0.740521,0.547006,1.07689,0.678693,0.354946,1.25867,0.134701,0.225998,7.20729e-05
|tfbs_overrepresentation_for_novel_motifs=0.0942734,0.000416561,0.0904779,1.0012,1.35524,0.518467,0.226953,0.502803,0.495015,0.016196,0.155105,0.258748,0.0724758,0.624423,1.86991,0.276011,0.401017,3.89098,0.0183131,0.25119,0.0905079,0.00629905,0.169484,0.516065,0.742963,0.275879,0.154326,0.168077,0.0717257,0.269248,0.436612,1.10344,0.0360115,0.374316,0.0554298,0.443344,0.0541423,0.175318,0.38935,0.0930851,0.445121,0.131762,1.76266,1.86076,0.389103,0.106689,0.227736,0.148323,1.32463,0.251047,0.286755,0.236257,0.178341,0.49846,0.635443,0.220828,0.256602,0.197918,0.130563,0.197226,0.467239,0.22944,0.266076,0.377975,0.242486,0.349807,0.716956,1.06805,1.08432,0.911622,0.124048,1.20366,0.0256534,0.633615,1.23827,0.0598881,0.13996,0.364079,1.07834,0.35946,2.30215,0.377089,0.242227,0.511606,0.586887,0.000111344,0.0173351,0.12387,0.306981,1.1648,0.804514,0.562601,0.446434,0.627248,0.0706505,1.04013,0.399529,0.483243,0.310601,0.877456,0.0456482,0.441596,0.47839,0.404088,0.340503,0.15226,0.39086,0.618652,0.114869,0.0632414,0.0962642,0.475985,0.0876862,0.161084,0.759328,0.437533,0.00180706,0.140827,0.347912,0.154062,0.626054,0.305079,0.172748,0.698687,0.863933,0.956184,0.222409,0.450719,0.66511,0.166515,0.563221,0.143305,0.678365,0.248069,0.81669,0.420713,1.36399,0.168444,0.776656,1.61314,1.21607,0.741657,1.19021,0.480173,0.341918,1.06736,0.875921,1.45545,2.56592,0.147439,0.00359134,0.00102667,0.563563,0.470621,1.21104,0.940968,0.294363,0.0641085,0.368557,0.0993076,0.740521,0.547006,1.07689,0.678693,0.354946,1.25867,0.134701,0.225998,7.20729e-05
|tfbs_overrepresentation_jaspar=MA0003.1;3.88725e-06,MA0004.1;0.158412,MA0006.1;0.0694838,MA0007.1;0.146569,MA0009.1;0.526253,MA0014.1;1.18834e-05,MA0017.1;0.0884918,MA0019.1;0.726406,MA0024.1;0.434294,MA0025.1;0.647545,MA0027.1;2.09389,MA0028.1;0.0770177,MA0029.1;0.450974,MA0030.1;0.441064,MA0031.1;0.386141,MA0038.1;0.648449,MA0040.1;0.456051,MA0041.1;0.170492,MA0042.1;0.149889,MA0043.1;0.526535,MA0046.1;0.516541,MA0048.1;0.537344,MA0050.1;0.458935,MA0051.1;0.22589,MA0052.1;0.459414,MA0055.1;0.00831201,MA0056.1;0,MA0057.1;0.00450362,MA0058.1;0.101748,MA0059.1;0.101051,MA0060.1;0.0258987,MA0061.1;0.0847828,MA0063.1;0,MA0066.1;0.22927,MA0067.1;0.820123,MA0068.1;0.0553606,MA0069.1;0.51311,MA0070.1;0.503171,MA0071.1;0.583044,MA0072.1;0.499187,MA0073.1;3.42403e-11,MA0074.1;0.225345,MA0076.1;0.110503,MA0077.1;0.49237,MA0078.1;0.30111,MA0081.1;0.101139,MA0083.1;0.532971,MA0084.1;0.999884,MA0087.1;0.497023,MA0088.1;0.00120138,MA0089.1;0,MA0090.1;0.118716,MA0091.1;0.160096,MA0092.1;0.136418,MA0093.1;0.0708814,MA0095.1;0,MA0098.1;0,MA0100.1;0.239133,MA0101.1;0.25283,MA0103.1;0.501795,MA0105.1;0.0646197,MA0106.1;0.259598,MA0107.1;0.162095,MA0108.2;0.383574,MA0109.1;0,MA0111.1;0.398557,MA0113.1;0.272101,MA0114.1;0.0401034,MA0115.1;0.747865,MA0116.1;0.0431675,MA0117.1;0.560027,MA0119.1;0.0925355,MA0122.1;0.583485,MA0124.1;1.6886,MA0125.1;0.631059,MA0130.1;0,MA0131.1;0.315517,MA0132.1;0,MA0133.1;0,MA0135.1;0.553498,MA0136.1;0.234116,MA0139.1;0.0745458,MA0140.1;0.199454,MA0141.1;0.329072,MA0142.1;0.945139,MA0143.1;0.74864,MA0144.1;0.140794,MA0145.1;0.0109701,MA0146.1;6.28585e-06,MA0147.1;0.0444528,MA0148.1;0.518828,MA0149.1;0.192747,MA0062.2;0.0177333,MA0035.2;0.198962,MA0039.2;9.06517e-07,MA0138.2;3.13046,MA0002.2;0.24323,MA0137.2;0.0801516,MA0104.2;0.0256869,MA0047.2;0.250458,MA0112.2;0.00940745,MA0065.2;0.00177701,MA0150.1;0.115337,MA0151.1;0,MA0152.1;1.74834,MA0153.1;0.615584,MA0154.1;0.142088,MA0155.1;0.00810476,MA0156.1;0.0812668,MA0157.1;0.337287,MA0158.1;0,MA0159.1;1.50389,MA0160.1;0.18494,MA0161.1;0,MA0162.1;5.0328e-05,MA0163.1;1.468e-05,MA0164.1;0.28168,MA0080.2;0.248589,MA0018.2;0.260646,MA0099.2;1.1153,MA0079.2;4.89473e-12,MA0102.2;1.03595,MA0258.1;0.032189,MA0259.1;0.0476147,MA0442.1;0
}}
}}

Revision as of 19:11, 22 January 2013


Full id: C456_Fibroblast_Smooth_CD14_Preadipocyte_Lens_mesenchymal_serous



Phase1 CAGE Peaks

Hg19::chr5:82767555..82767575,+p1@VCAN
Hg19::chr5:82767585..82767607,+p2@VCAN
Hg19::chr5:82789361..82789380,+p13@VCAN
Hg19::chr5:82808116..82808153,+p12@VCAN
Hg19::chr5:82808155..82808193,+p9@VCAN
Hg19::chr5:82817501..82817514,+p11@VCAN
Hg19::chr5:82818036..82818054,+p14@VCAN
Hg19::chr5:82832922..82832942,+p@chr5:82832922..82832942
+
Hg19::chr5:82833507..82833521,+p@chr5:82833507..82833521
+
Hg19::chr5:82833713..82833727,+p@chr5:82833713..82833727
+
Hg19::chr5:82834000..82834017,+p@chr5:82834000..82834017
+
Hg19::chr5:82834804..82834842,+p@chr5:82834804..82834842
+
Hg19::chr5:82834843..82834902,+p@chr5:82834843..82834902
+
Hg19::chr5:82834954..82834973,+p@chr5:82834954..82834973
+
Hg19::chr5:82835000..82835031,+p@chr5:82835000..82835031
+
Hg19::chr5:82835043..82835057,+p@chr5:82835043..82835057
+
Hg19::chr5:82835589..82835617,+p@chr5:82835589..82835617
+
Hg19::chr5:82835837..82835870,+p@chr5:82835837..82835870
+
Hg19::chr5:82836231..82836261,+p@chr5:82836231..82836261
+
Hg19::chr5:82836392..82836413,+p@chr5:82836392..82836413
+
Hg19::chr5:82837130..82837153,+p8@VCAN
Hg19::chr5:82837460..82837472,+p15@VCAN


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

No results for this coexpression

Enriched Gene Ontology terms on this co-expression cluster<b>Summary:</b> Results for GOStat analysis on co-expressed clusters. Each cluster with promoters mapping to at least two different genes was analysed with GOStat (PMID: 14962934) with default parameter. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br>data

No GOStat results

Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br>disease_data<br>

Cell Type
Ontology termp-valuen
classical monocyte1.88e-2342
CD14-positive, CD16-negative classical monocyte1.88e-2342
defensive cell3.42e-1848
phagocyte3.42e-1848
multi fate stem cell1.45e-13427
stem cell1.91e-13441
somatic stem cell7.71e-13433
stuff accumulating cell8.43e-1287
monopoietic cell3.33e-1159
monocyte3.33e-1159
monoblast3.33e-1159
promonocyte3.33e-1159
macrophage dendritic cell progenitor2.38e-1061
fibroblast2.71e-1076
electrically responsive cell3.65e-1061
electrically active cell3.65e-1061
muscle precursor cell2.66e-0958
myoblast2.66e-0958
multi-potent skeletal muscle stem cell2.66e-0958
muscle cell8.21e-0955
myeloid lineage restricted progenitor cell1.70e-0866
granulocyte monocyte progenitor cell3.63e-0867
myeloid leukocyte1.08e-0772
vascular associated smooth muscle cell1.93e-0732
preadipocyte1.93e-0712
contractile cell2.22e-0759
Uber Anatomy
Ontology termp-valuen
mesoderm9.22e-18315
mesoderm-derived structure9.22e-18315
presumptive mesoderm9.22e-18315
musculoskeletal system1.94e-16167
multi-cellular organism8.37e-11656
lateral plate mesoderm7.61e-10203
skeletal muscle tissue1.14e-0962
striated muscle tissue1.14e-0962
myotome1.14e-0962
dense mesenchyme tissue4.24e-0973
anatomical system6.08e-09624
muscle tissue6.37e-0964
musculature6.37e-0964
musculature of body6.37e-0964
anatomical group8.15e-09625
paraxial mesoderm1.06e-0872
presumptive paraxial mesoderm1.06e-0872
somite1.51e-0871
presomitic mesoderm1.51e-0871
presumptive segmental plate1.51e-0871
dermomyotome1.51e-0871
trunk paraxial mesoderm1.51e-0871
heart3.52e-0824
primitive heart tube3.52e-0824
primary heart field3.52e-0824
anterior lateral plate mesoderm3.52e-0824
heart tube3.52e-0824
heart primordium3.52e-0824
cardiac mesoderm3.52e-0824
cardiogenic plate3.52e-0824
heart rudiment3.52e-0824
bone marrow3.42e-0776
splanchnic layer of lateral plate mesoderm4.13e-0783
cardiovascular system4.80e-07109
epithelial vesicle6.38e-0778
skeletal system6.68e-07100
Disease
Ontology termp-valuen
ovarian cancer2.19e-0914


Overrepresented TFBS (DNA) motifs on this co-expression cluster<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs



JASPAR motifs

Motifs-log10(p-value)
MA0003.13.88725e-06
MA0004.10.158412
MA0006.10.0694838
MA0007.10.146569
MA0009.10.526253
MA0014.11.18834e-05
MA0017.10.0884918
MA0019.10.726406
MA0024.10.434294
MA0025.10.647545
MA0027.12.09389
MA0028.10.0770177
MA0029.10.450974
MA0030.10.441064
MA0031.10.386141
MA0038.10.648449
MA0040.10.456051
MA0041.10.170492
MA0042.10.149889
MA0043.10.526535
MA0046.10.516541
MA0048.10.537344
MA0050.10.458935
MA0051.10.22589
MA0052.10.459414
MA0055.10.00831201
MA0056.10
MA0057.10.00450362
MA0058.10.101748
MA0059.10.101051
MA0060.10.0258987
MA0061.10.0847828
MA0063.10
MA0066.10.22927
MA0067.10.820123
MA0068.10.0553606
MA0069.10.51311
MA0070.10.503171
MA0071.10.583044
MA0072.10.499187
MA0073.13.42403e-11
MA0074.10.225345
MA0076.10.110503
MA0077.10.49237
MA0078.10.30111
MA0081.10.101139
MA0083.10.532971
MA0084.10.999884
MA0087.10.497023
MA0088.10.00120138
MA0089.10
MA0090.10.118716
MA0091.10.160096
MA0092.10.136418
MA0093.10.0708814
MA0095.10
MA0098.10
MA0100.10.239133
MA0101.10.25283
MA0103.10.501795
MA0105.10.0646197
MA0106.10.259598
MA0107.10.162095
MA0108.20.383574
MA0109.10
MA0111.10.398557
MA0113.10.272101
MA0114.10.0401034
MA0115.10.747865
MA0116.10.0431675
MA0117.10.560027
MA0119.10.0925355
MA0122.10.583485
MA0124.11.6886
MA0125.10.631059
MA0130.10
MA0131.10.315517
MA0132.10
MA0133.10
MA0135.10.553498
MA0136.10.234116
MA0139.10.0745458
MA0140.10.199454
MA0141.10.329072
MA0142.10.945139
MA0143.10.74864
MA0144.10.140794
MA0145.10.0109701
MA0146.16.28585e-06
MA0147.10.0444528
MA0148.10.518828
MA0149.10.192747
MA0062.20.0177333
MA0035.20.198962
MA0039.29.06517e-07
MA0138.23.13046
MA0002.20.24323
MA0137.20.0801516
MA0104.20.0256869
MA0047.20.250458
MA0112.20.00940745
MA0065.20.00177701
MA0150.10.115337
MA0151.10
MA0152.11.74834
MA0153.10.615584
MA0154.10.142088
MA0155.10.00810476
MA0156.10.0812668
MA0157.10.337287
MA0158.10
MA0159.11.50389
MA0160.10.18494
MA0161.10
MA0162.15.0328e-05
MA0163.11.468e-05
MA0164.10.28168
MA0080.20.248589
MA0018.20.260646
MA0099.21.1153
MA0079.24.89473e-12
MA0102.21.03595
MA0258.10.032189
MA0259.10.0476147
MA0442.10



ENCODE TF ChIP-seq peak enrichment analysis<b>Summary:</b> For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br><br>data

No analysis results for this cluster

Relative expression of the co-expression cluster<b>Summary:</b>Co-expression clusters are compared against FANTOM5 samples to obtain relative expression. <br><b>Analyst:</b>NA<br><br>link to data source<br> data

This analysis result is provided for C0 - C305 clusters.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=Coexpression_cluster:C456&oldid=2568967"