FFCP PHASE1:Hg19::chr10:5333981..5333997,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C0|description=CAGE_peak_at_chr10:5333981..5333997,+|id=chr10:5333981..5333997,+|ontology_enrichment_celltype=CL:0002057!4.38e-48!42;CL:0000860!1.12e-45!45;CL:0002194!6.71e-40!63;CL:0000576!6.71e-40!63;CL:0000040!6.71e-40!63;CL:0000559!6.71e-40!63;CL:0000766!8.40e-39!76;CL:0002009!3.95e-38!65;CL:0002087!2.23e-34!119;CL:0000839!3.72e-34!70;CL:0000738!4.98e-34!140;CL:0000557!1.98e-33!71;CL:0000037!1.61e-28!172;CL:0000566!1.61e-28!172;CL:0002031!3.54e-28!124;CL:0000763!2.01e-27!112;CL:0000049!2.01e-27!112;CL:0002032!1.72e-26!165;CL:0000837!1.72e-26!165;CL:0000988!1.57e-25!182;CL:0000134!3.97e-11!358;CL:0002320!2.09e-10!365;CL:0000048!4.60e-09!430;CL:0000003!5.13e-09!722;CL:0000034!9.72e-09!444;CL:0000723!1.47e-08!436;CL:0000624!1.67e-08!6;CL:0000791!2.87e-08!18;CL:0000789!2.87e-08!18;CL:0002420!2.87e-08!18;CL:0002419!2.87e-08!18;CL:0000790!2.87e-08!18;CL:0000219!6.03e-08!390;CL:0000063!2.41e-07!578|ontology_enrichment_celltype_v019=CL:0000860;6.38e-87;33!CL:0002057;6.38e-87;33!CL:0000473;1.54e-60;39!CL:0000234;1.54e-60;39!CL:0000576;8.67e-50;48!CL:0000766;3.04e-32;69!CL:0002087;7.27e-20;104!CL:0000624;1.46e-17;6!CL:0000763;1.73e-14;100!CL:0000738;2.00e-12;136!CL:0000767;6.49e-10;3!CL:0000623;9.10e-10;3!CL:0000791;2.23e-09;18!CL:0000789;2.23e-09;18!CL:0002419;2.23e-09;18!CL:0000226;2.39e-09;3!CL:0000898;2.39e-09;3!CL:0000842;2.39e-09;3!CL:0000094;2.76e-09;8!CL:0002393;1.29e-08;6!CL:0002397;1.29e-08;6!CL:0000988;8.52e-08;177|ontology_enrichment_celltype_v019_2=CL:0000860,5.64e-93,42;CL:0002057,5.64e-93,42;CL:0000473,4.15e-80,48;CL:0000234,4.15e-80,48;CL:0000766,4.81e-65,72;CL:0002194,4.25e-62,59;CL:0000576,4.25e-62,59;CL:0000040,4.25e-62,59;CL:0000559,4.25e-62,59;CL:0002009,8.95e-60,61;CL:0000738,2.24e-58,136;CL:0002087,1.39e-57,115;CL:0000839,1.42e-54,66;CL:0000557,1.26e-53,67;CL:0002031,1.15e-47,120;CL:0000037,6.87e-45,168;CL:0000988,5.72e-42,177;CL:0002032,1.41e-41,161;CL:0000837,1.41e-41,161;CL:0000763,5.64e-40,108;CL:0000049,5.64e-40,108;CL:0000624,1.42e-17,6;CL:0000134,1.25e-14,354;CL:0002320,4.23e-14,361;CL:0000219,3.10e-12,386;CL:0000048,1.27e-10,427;CL:0000034,1.44e-10,441;CL:0000723,2.68e-10,433;CL:0000767,6.70e-10,3;CL:0000623,9.38e-10,3;CL:0000825,9.38e-10,3;CL:0000791,2.25e-09,18;CL:0000789,2.25e-09,18;CL:0002420,2.25e-09,18;CL:0002419,2.25e-09,18;CL:0000790,2.25e-09,18;CL:0000226,2.25e-09,3;CL:0000842,2.25e-09,3;CL:0000898,2.39e-09,3;CL:0000094,2.79e-09,8|ontology_enrichment_development_v019=CL:0002057;3.81e-69;42!CL:0000049;3.03e-12;108!CL:0000790;2.23e-09;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!9.81e-28!80;UBERON:0002390!5.02e-26!102;UBERON:0003061!5.02e-26!102;UBERON:0002193!3.20e-25!112;UBERON:0001474!1.27e-24!86;UBERON:0002405!1.79e-21!115;UBERON:0004765!1.31e-19!101;UBERON:0001434!1.31e-19!101;UBERON:0003081!3.17e-12!216;UBERON:0002204!4.37e-10!167;UBERON:0002384!1.94e-09!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.34e-46,76;UBERON:0002390,1.49e-42,98;UBERON:0003061,1.49e-42,98;UBERON:0001474,3.76e-42,82;UBERON:0002405,1.55e-40,93;UBERON:0002193,9.84e-40,108;UBERON:0004765,1.39e-37,90;UBERON:0001434,6.79e-33,100;UBERON:0003081,2.53e-16,203;UBERON:0002204,5.56e-16,167;UBERON:0002384,2.23e-13,371;UBERON:0000926,4.65e-07,315;UBERON:0004120,4.65e-07,315;UBERON:0006603,4.65e-07,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,14.5544782434094,6.90892916574983,14.243083345079,0,1.204823675113,0.739508020333575,0,0,0,39.8876694142952,26.6724115135288,27.3433697101973,0.223915474239924,0,0,14.3944256391769,14.7371618038636,12.8569552429543,24.6374779120026,20.1472265130695,28.1832797514544,110.186186259384,77.1043726652593,124.626135151284,183.749447832618,123.933059248095,96.1528054819827,25.6009581777942,25.9260842554953,28.9893294934159,262.926063546605,257.385079715027,246.144793432631,29.3567657166177,40.092195181948,37.5077780468771,50.7866167600022,38.5821952789975,52.9398911646239,54.0184630301998,58.9275697814828,66.6769753244708,25.4267791106015,58.5561441220228,65.5077142002631,0.211255286311942,0.425208599930087,1.04829322754188,1.34794357375794,0.600707571366025,1.76798145366788,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,7.8471198817415,0.263384084775077,10.8190373562608,11.3973121197258,15.2145109259637,0.501559486172034,3.58514493296949,1.4203434172042,0,0.334231370655521,1.17842362989935,1.77227115666897,0.541607727530031,0.512365278902701,0.910415432919148,0.164437904603676,0.552700035571697,0,2.66915813691709,0.802622484269139,1.04535523804977,0.339928028092699,5.74830740402882,2.40539211837841,1.26509846009751,0,0,0,0.301150238155546,0.383959833463255,0,0.710331756132051,0,8.064269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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:5333981..5333997,+ | |||
|id=chr10:5333981..5333997,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.38e-48!42;CL:0000860!1.12e-45!45;CL:0002194!6.71e-40!63;CL:0000576!6.71e-40!63;CL:0000040!6.71e-40!63;CL:0000559!6.71e-40!63;CL:0000766!8.40e-39!76;CL:0002009!3.95e-38!65;CL:0002087!2.23e-34!119;CL:0000839!3.72e-34!70;CL:0000738!4.98e-34!140;CL:0000557!1.98e-33!71;CL:0000037!1.61e-28!172;CL:0000566!1.61e-28!172;CL:0002031!3.54e-28!124;CL:0000763!2.01e-27!112;CL:0000049!2.01e-27!112;CL:0002032!1.72e-26!165;CL:0000837!1.72e-26!165;CL:0000988!1.57e-25!182;CL:0000134!3.97e-11!358;CL:0002320!2.09e-10!365;CL:0000048!4.60e-09!430;CL:0000003!5.13e-09!722;CL:0000034!9.72e-09!444;CL:0000723!1.47e-08!436;CL:0000624!1.67e-08!6;CL:0000791!2.87e-08!18;CL:0000789!2.87e-08!18;CL:0002420!2.87e-08!18;CL:0002419!2.87e-08!18;CL:0000790!2.87e-08!18;CL:0000219!6.03e-08!390;CL:0000063!2.41e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.38e-87;33!CL:0002057;6.38e-87;33!CL:0000473;1.54e-60;39!CL:0000234;1.54e-60;39!CL:0000576;8.67e-50;48!CL:0000766;3.04e-32;69!CL:0002087;7.27e-20;104!CL:0000624;1.46e-17;6!CL:0000763;1.73e-14;100!CL:0000738;2.00e-12;136!CL:0000767;6.49e-10;3!CL:0000623;9.10e-10;3!CL:0000791;2.23e-09;18!CL:0000789;2.23e-09;18!CL:0002419;2.23e-09;18!CL:0000226;2.39e-09;3!CL:0000898;2.39e-09;3!CL:0000842;2.39e-09;3!CL:0000094;2.76e-09;8!CL:0002393;1.29e-08;6!CL:0002397;1.29e-08;6!CL:0000988;8.52e-08;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.64e-93,42;CL:0002057,5.64e-93,42;CL:0000473,4.15e-80,48;CL:0000234,4.15e-80,48;CL:0000766,4.81e-65,72;CL:0002194,4.25e-62,59;CL:0000576,4.25e-62,59;CL:0000040,4.25e-62,59;CL:0000559,4.25e-62,59;CL:0002009,8.95e-60,61;CL:0000738,2.24e-58,136;CL:0002087,1.39e-57,115;CL:0000839,1.42e-54,66;CL:0000557,1.26e-53,67;CL:0002031,1.15e-47,120;CL:0000037,6.87e-45,168;CL:0000988,5.72e-42,177;CL:0002032,1.41e-41,161;CL:0000837,1.41e-41,161;CL:0000763,5.64e-40,108;CL:0000049,5.64e-40,108;CL:0000624,1.42e-17,6;CL:0000134,1.25e-14,354;CL:0002320,4.23e-14,361;CL:0000219,3.10e-12,386;CL:0000048,1.27e-10,427;CL:0000034,1.44e-10,441;CL:0000723,2.68e-10,433;CL:0000767,6.70e-10,3;CL:0000623,9.38e-10,3;CL:0000825,9.38e-10,3;CL:0000791,2.25e-09,18;CL:0000789,2.25e-09,18;CL:0002420,2.25e-09,18;CL:0002419,2.25e-09,18;CL:0000790,2.25e-09,18;CL:0000226,2.25e-09,3;CL:0000842,2.25e-09,3;CL:0000898,2.39e-09,3;CL:0000094,2.79e-09,8 | |||
|ontology_enrichment_development_v019=CL:0002057;3.81e-69;42!CL:0000049;3.03e-12;108!CL:0000790;2.23e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.81e-28!80;UBERON:0002390!5.02e-26!102;UBERON:0003061!5.02e-26!102;UBERON:0002193!3.20e-25!112;UBERON:0001474!1.27e-24!86;UBERON:0002405!1.79e-21!115;UBERON:0004765!1.31e-19!101;UBERON:0001434!1.31e-19!101;UBERON:0003081!3.17e-12!216;UBERON:0002204!4.37e-10!167;UBERON:0002384!1.94e-09!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.34e-46,76;UBERON:0002390,1.49e-42,98;UBERON:0003061,1.49e-42,98;UBERON:0001474,3.76e-42,82;UBERON:0002405,1.55e-40,93;UBERON:0002193,9.84e-40,108;UBERON:0004765,1.39e-37,90;UBERON:0001434,6.79e-33,100;UBERON:0003081,2.53e-16,203;UBERON:0002204,5.56e-16,167;UBERON:0002384,2.23e-13,371;UBERON:0000926,4.65e-07,315;UBERON:0004120,4.65e-07,315;UBERON:0006603,4.65e-07,315 | |||
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|short_description=p@chr10:5333981..5333997,+ | |||
}} |
Revision as of 13:38, 10 September 2013
Short description: | p@chr10:5333981..5333997, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:5333981..5333997, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.34e-46 | 76 |
hematopoietic system | 1.49e-42 | 98 |
blood island | 1.49e-42 | 98 |
bone element | 3.76e-42 | 82 |
immune system | 1.55e-40 | 93 |
hemolymphoid system | 9.84e-40 | 108 |
skeletal element | 1.39e-37 | 90 |
skeletal system | 6.79e-33 | 100 |
lateral plate mesoderm | 2.53e-16 | 203 |
musculoskeletal system | 5.56e-16 | 167 |
connective tissue | 2.23e-13 | 371 |
mesoderm | 4.65e-07 | 315 |
mesoderm-derived structure | 4.65e-07 | 315 |
presumptive mesoderm | 4.65e-07 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.