FFCP PHASE1:Hg19::chr11:60739122..60739137,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=923|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1691|TSSclassifier=S|UniProt=|association_with_transcript=7bp_to_ENST00000344028,ENST00000346437,uc001nqp.2,uc001nqq.2,uc001nqr.2,uc001nqs.2,uc001nqt.2,uc009yni.2,uc009ynj.2_5end|coexpression_cluster_id=C23|description=CAGE_peak_2_at_CD6_5end|id=chr11:60739122..60739137,+|ontology_enrichment_celltype=CL:0000084!1.70e-39!25;CL:0000827!1.70e-39!25;CL:0000791!2.59e-35!18;CL:0000789!2.59e-35!18;CL:0002420!2.59e-35!18;CL:0002419!2.59e-35!18;CL:0000790!2.59e-35!18;CL:0000838!1.45e-31!52;CL:0000542!8.90e-31!53;CL:0000051!8.90e-31!53;CL:0000738!2.49e-27!140;CL:0002087!4.42e-26!119;CL:0000625!9.08e-22!11;CL:0002031!1.49e-21!124;CL:0000037!2.69e-21!172;CL:0000566!2.69e-21!172;CL:0000988!2.84e-19!182;CL:0002032!2.51e-18!165;CL:0000837!2.51e-18!165;CL:0000624!1.19e-13!6;CL:0000898!1.61e-07!3;CL:0000842!2.20e-07!3;CL:0000623!3.19e-07!3;CL:0000825!3.19e-07!3|ontology_enrichment_celltype_v019=CL:0000791;1.20e-47;18!CL:0000789;1.20e-47;18!CL:0002419;1.20e-47;18!CL:0000084;6.36e-47;25!CL:0000625;2.82e-30;11!CL:0000624;3.52e-22;6!CL:0000542;2.88e-17;53!CL:0000898;1.10e-11;3!CL:0000226;1.25e-11;3!CL:0000842;1.25e-11;3!CL:0000623;3.78e-11;3!CL:0000767;3.65e-10;3!CL:0000815;3.01e-08;2!CL:0000792;3.01e-08;2!CL:0002677;3.01e-08;2!CL:0002087;8.25e-07;104|ontology_enrichment_celltype_v019_2=CL:0000791,8.56e-48,18;CL:0000789,8.56e-48,18;CL:0002420,8.56e-48,18;CL:0002419,8.56e-48,18;CL:0000790,8.56e-48,18;CL:0000084,5.39e-47,25;CL:0000827,5.39e-47,25;CL:0000625,2.38e-30,11;CL:0000838,3.49e-30,52;CL:0000542,1.69e-29,53;CL:0000051,1.69e-29,53;CL:0000624,2.90e-22,6;CL:0000738,1.91e-19,136;CL:0002087,4.26e-18,115;CL:0000037,3.19e-14,168;CL:0000988,4.24e-13,177;CL:0002031,5.88e-13,120;CL:0000898,9.06e-12,3;CL:0000226,1.55e-11,3;CL:0000842,1.55e-11,3;CL:0000623,2.91e-11,3;CL:0000825,2.91e-11,3;CL:0002032,9.28e-11,161;CL:0000837,9.28e-11,161;CL:0000767,2.18e-10,3;CL:0000815,2.39e-08,2;CL:0000792,2.39e-08,2;CL:0002677,2.39e-08,2|ontology_enrichment_development_v019=CL:0000790;1.20e-47;18!CL:0000051;2.88e-17;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000178!1.25e-14!15;UBERON:0000179!1.25e-14!15;UBERON:0000463!1.25e-14!15;UBERON:0002390!2.94e-10!102;UBERON:0003061!2.94e-10!102;UBERON:0004177!5.19e-10!7;UBERON:0002193!2.08e-09!112;UBERON:0002370!6.86e-09!4;UBERON:0005058!6.86e-09!4;UBERON:0009113!6.86e-09!4;UBERON:0003295!6.86e-09!4;UBERON:0005562!6.86e-09!4|ontology_enrichment_uberon_v019=UBERON:0000178;5.66e-21;15!UBERON:0000179;5.66e-21;15!UBERON:0000463;5.66e-21;15!UBERON:0002390;6.85e-12;32!UBERON:0002370;4.07e-08;2!UBERON:0005058;4.07e-08;2!UBERON:0009113;4.07e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0000178,7.49e-21,15;UBERON:0000179,7.49e-21,15;UBERON:0000463,7.49e-21,15;UBERON:0002370,9.43e-09,4;UBERON:0005058,9.43e-09,4;UBERON:0009113,9.43e-09,4;UBERON:0003295,9.43e-09,4;UBERON:0005562,9.43e-09,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,1.96682138424452,1.91914699048606,1.39334510984468,0,0,0,0,0,0,1.10799081706375,2.20598892217156,2.17010870715852,0,0.32389366601898,0,0,0,0.242584061187816,0,0.411167888021826,0.619412741790207,0,0,0,0,0,0,0.188242339542605,0.272906150057846,0,0,0.641858054152187,0,0,0.598390972864896,0,0.290209238628584,0,0,0,0,0.217188844705117,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0.661044872784862,0,0,0,1.14681968437569,0,1.12101712596307,0,7.27826149421182,7.8602152549833,8.63526295797939,0.334372990781356,8.79990119910694,4.73447805734733,3.89653456815823,3.56513462032555,2.94605907474837,2.65840673500345,4.06205795647523,4.61128751012431,2.34106825607781,0.986627427622057,1.38175008892924,1.15921234294021,9.34205347920981,5.88589821797369,3.1360657141493,2.26618685395132,5.74830740402882,4.46715679127419,5.81945291644857,2.86708872891687,1.30216690771284,1.90090408889675,3.01150238155546,3.58362511232371,3.74792179657038,2.60454977248419,0.821127996921047,6.65302252641617,8.29064606928873,12.4548987339207,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6487785964879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672510863961164,2.56139988262505,3.88129634747131,3.85029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.34212854858063,3.01999881146064,4.48255742774466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=923 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1691 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=7bp_to_ENST00000344028,ENST00000346437,uc001nqp.2,uc001nqq.2,uc001nqr.2,uc001nqs.2,uc001nqt.2,uc009yni.2,uc009ynj.2_5end | |||
|coexpression_cluster_id=C23 | |||
|description=CAGE_peak_2_at_CD6_5end | |||
|id=chr11:60739122..60739137,+ | |||
|ontology_enrichment_celltype=CL:0000084!1.70e-39!25;CL:0000827!1.70e-39!25;CL:0000791!2.59e-35!18;CL:0000789!2.59e-35!18;CL:0002420!2.59e-35!18;CL:0002419!2.59e-35!18;CL:0000790!2.59e-35!18;CL:0000838!1.45e-31!52;CL:0000542!8.90e-31!53;CL:0000051!8.90e-31!53;CL:0000738!2.49e-27!140;CL:0002087!4.42e-26!119;CL:0000625!9.08e-22!11;CL:0002031!1.49e-21!124;CL:0000037!2.69e-21!172;CL:0000566!2.69e-21!172;CL:0000988!2.84e-19!182;CL:0002032!2.51e-18!165;CL:0000837!2.51e-18!165;CL:0000624!1.19e-13!6;CL:0000898!1.61e-07!3;CL:0000842!2.20e-07!3;CL:0000623!3.19e-07!3;CL:0000825!3.19e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.20e-47;18!CL:0000789;1.20e-47;18!CL:0002419;1.20e-47;18!CL:0000084;6.36e-47;25!CL:0000625;2.82e-30;11!CL:0000624;3.52e-22;6!CL:0000542;2.88e-17;53!CL:0000898;1.10e-11;3!CL:0000226;1.25e-11;3!CL:0000842;1.25e-11;3!CL:0000623;3.78e-11;3!CL:0000767;3.65e-10;3!CL:0000815;3.01e-08;2!CL:0000792;3.01e-08;2!CL:0002677;3.01e-08;2!CL:0002087;8.25e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,8.56e-48,18;CL:0000789,8.56e-48,18;CL:0002420,8.56e-48,18;CL:0002419,8.56e-48,18;CL:0000790,8.56e-48,18;CL:0000084,5.39e-47,25;CL:0000827,5.39e-47,25;CL:0000625,2.38e-30,11;CL:0000838,3.49e-30,52;CL:0000542,1.69e-29,53;CL:0000051,1.69e-29,53;CL:0000624,2.90e-22,6;CL:0000738,1.91e-19,136;CL:0002087,4.26e-18,115;CL:0000037,3.19e-14,168;CL:0000988,4.24e-13,177;CL:0002031,5.88e-13,120;CL:0000898,9.06e-12,3;CL:0000226,1.55e-11,3;CL:0000842,1.55e-11,3;CL:0000623,2.91e-11,3;CL:0000825,2.91e-11,3;CL:0002032,9.28e-11,161;CL:0000837,9.28e-11,161;CL:0000767,2.18e-10,3;CL:0000815,2.39e-08,2;CL:0000792,2.39e-08,2;CL:0002677,2.39e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000790;1.20e-47;18!CL:0000051;2.88e-17;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.25e-14!15;UBERON:0000179!1.25e-14!15;UBERON:0000463!1.25e-14!15;UBERON:0002390!2.94e-10!102;UBERON:0003061!2.94e-10!102;UBERON:0004177!5.19e-10!7;UBERON:0002193!2.08e-09!112;UBERON:0002370!6.86e-09!4;UBERON:0005058!6.86e-09!4;UBERON:0009113!6.86e-09!4;UBERON:0003295!6.86e-09!4;UBERON:0005562!6.86e-09!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.66e-21;15!UBERON:0000179;5.66e-21;15!UBERON:0000463;5.66e-21;15!UBERON:0002390;6.85e-12;32!UBERON:0002370;4.07e-08;2!UBERON:0005058;4.07e-08;2!UBERON:0009113;4.07e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,7.49e-21,15;UBERON:0000179,7.49e-21,15;UBERON:0000463,7.49e-21,15;UBERON:0002370,9.43e-09,4;UBERON:0005058,9.43e-09,4;UBERON:0009113,9.43e-09,4;UBERON:0003295,9.43e-09,4;UBERON:0005562,9.43e-09,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,1.96682138424452,1.91914699048606,1.39334510984468,0,0,0,0,0,0,1.10799081706375,2.20598892217156,2.17010870715852,0,0.32389366601898,0,0,0,0.242584061187816,0,0.411167888021826,0.619412741790207,0,0,0,0,0,0,0.188242339542605,0.272906150057846,0,0,0.641858054152187,0,0,0.598390972864896,0,0.290209238628584,0,0,0,0,0.217188844705117,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0.661044872784862,0,0,0,1.14681968437569,0,1.12101712596307,0,7.27826149421182,7.8602152549833,8.63526295797939,0.334372990781356,8.79990119910694,4.73447805734733,3.89653456815823,3.56513462032555,2.94605907474837,2.65840673500345,4.06205795647523,4.61128751012431,2.34106825607781,0.986627427622057,1.38175008892924,1.15921234294021,9.34205347920981,5.88589821797369,3.1360657141493,2.26618685395132,5.74830740402882,4.46715679127419,5.81945291644857,2.86708872891687,1.30216690771284,1.90090408889675,3.01150238155546,3.58362511232371,3.74792179657038,2.60454977248419,0.821127996921047,6.65302252641617,8.29064606928873,12.4548987339207,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6487785964879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672510863961164,2.56139988262505,3.88129634747131,3.85029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.34212854858063,3.01999881146064,4.48255742774466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,2.02979043692868,3.0585488285695,1.13929437434833,1.66762242820452,2.05681136543097,3.8908398671563,1.62009431171434,0.79312517629427,0,0,0,0,0,1.63626239701352,0.956557636372934,0,0.191505370132367,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0,1.24271716604159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,6.39959666735776,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.563903507879121,0.644578879735772,0,0,0,0,0,0.917458566809082,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.81074568032436,3.22788514338461,0,0,0,0,0,0.80822463617505,0.143444410785353,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | |||
|short_description=p2@CD6 | |||
}} |
Revision as of 18:21, 10 September 2013
Short description: | p2@CD6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_CD6_5end |
Coexpression cluster: | C23_CD4_CD8_Natural_Peripheral_Basophils_CD19_CD14 |
Association with transcript: | 7bp_to_ENST00000344028, ENST00000346437, uc001nqp.2, uc001nqq.2, uc001nqr.2, uc001nqs.2, uc001nqt.2, uc009yni.2, uc009ynj.2_5end |
EntrezGene: | CD6 |
HGNC: | 1691 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 8.56e-48 | 18 |
alpha-beta T cell | 8.56e-48 | 18 |
immature T cell | 8.56e-48 | 18 |
mature T cell | 8.56e-48 | 18 |
immature alpha-beta T cell | 8.56e-48 | 18 |
T cell | 5.39e-47 | 25 |
pro-T cell | 5.39e-47 | 25 |
CD8-positive, alpha-beta T cell | 2.38e-30 | 11 |
lymphoid lineage restricted progenitor cell | 3.49e-30 | 52 |
lymphocyte | 1.69e-29 | 53 |
common lymphoid progenitor | 1.69e-29 | 53 |
CD4-positive, alpha-beta T cell | 2.90e-22 | 6 |
leukocyte | 1.91e-19 | 136 |
nongranular leukocyte | 4.26e-18 | 115 |
hematopoietic stem cell | 3.19e-14 | 168 |
hematopoietic cell | 4.24e-13 | 177 |
hematopoietic lineage restricted progenitor cell | 5.88e-13 | 120 |
naive T cell | 9.06e-12 | 3 |
single nucleate cell | 1.55e-11 | 3 |
mononuclear cell | 1.55e-11 | 3 |
natural killer cell | 2.91e-11 | 3 |
pro-NK cell | 2.91e-11 | 3 |
hematopoietic oligopotent progenitor cell | 9.28e-11 | 161 |
hematopoietic multipotent progenitor cell | 9.28e-11 | 161 |
basophil | 2.18e-10 | 3 |
regulatory T cell | 2.39e-08 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.39e-08 | 2 |
naive regulatory T cell | 2.39e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 7.49e-21 | 15 |
haemolymphatic fluid | 7.49e-21 | 15 |
organism substance | 7.49e-21 | 15 |
thymus | 9.43e-09 | 4 |
hemolymphoid system gland | 9.43e-09 | 4 |
thymic region | 9.43e-09 | 4 |
pharyngeal gland | 9.43e-09 | 4 |
thymus primordium | 9.43e-09 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.