FFCP PHASE1:Hg19::chr11:61722670..61722712,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7439|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=12703|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_uc010rlv.1_5end|coexpression_cluster_id=C246|description=CAGE_peak_2_at_BEST1_5end|id=chr11:61722670..61722712,+|ontology_enrichment_celltype=CL:0000766!3.44e-33!76;CL:0002194!1.66e-28!63;CL:0000576!1.66e-28!63;CL:0000040!1.66e-28!63;CL:0000559!1.66e-28!63;CL:0002057!4.61e-28!42;CL:0002009!1.49e-26!65;CL:0000557!1.96e-26!71;CL:0000839!3.51e-26!70;CL:0000860!2.60e-24!45;CL:0000048!2.33e-17!430;CL:0000763!7.17e-17!112;CL:0000049!7.17e-17!112;CL:0000723!1.56e-16!436;CL:0000034!2.44e-15!444;CL:0002320!1.13e-13!365;CL:0000134!1.54e-13!358;CL:0000219!6.55e-10!390;CL:0000738!3.72e-08!140;CL:0002393!3.44e-07!9;CL:0002397!3.44e-07!9|ontology_enrichment_celltype_v019=CL:0000860;1.66e-28;33!CL:0002057;1.66e-28;33!CL:0000473;1.75e-27;39!CL:0000234;1.75e-27;39!CL:0000576;7.94e-26;48!CL:0000766;8.35e-23;69!CL:0000763;6.57e-11;100!CL:0000094;1.62e-08;8|ontology_enrichment_celltype_v019_2=CL:0000766,2.54e-52,72;CL:0002194,1.01e-44,59;CL:0000576,1.01e-44,59;CL:0000040,1.01e-44,59;CL:0000559,1.01e-44,59;CL:0000473,3.54e-44,48;CL:0000234,3.54e-44,48;CL:0000557,7.17e-43,67;CL:0000839,1.60e-42,66;CL:0002009,1.77e-42,61;CL:0000860,7.44e-40,42;CL:0002057,7.44e-40,42;CL:0000763,1.26e-31,108;CL:0000049,1.26e-31,108;CL:0000134,1.17e-20,354;CL:0000048,1.23e-20,427;CL:0000723,4.48e-20,433;CL:0002320,2.28e-19,361;CL:0000034,9.02e-19,441;CL:0000738,4.24e-18,136;CL:0000219,7.71e-17,386;CL:0002087,4.84e-15,115;CL:0002031,5.78e-14,120;CL:0000037,8.18e-14,168;CL:0002032,2.48e-13,161;CL:0000837,2.48e-13,161;CL:0000988,6.49e-12,177;CL:0002393,1.10e-09,9;CL:0002397,1.10e-09,9;CL:0000094,9.56e-09,8|ontology_enrichment_development_v019=CL:0002057;1.54e-28;42!CL:0000049;2.71e-10;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!7.12e-29!102;UBERON:0003061!7.12e-29!102;UBERON:0002204!4.82e-26!167;UBERON:0002371!7.99e-26!80;UBERON:0002193!1.03e-25!112;UBERON:0001474!6.04e-22!86;UBERON:0004765!2.11e-19!101;UBERON:0001434!2.11e-19!101;UBERON:0003081!5.69e-16!216;UBERON:0002405!1.62e-15!115;UBERON:0002384!8.41e-13!375;UBERON:0000926!1.07e-10!448;UBERON:0004120!1.07e-10!448;UBERON:0006603!1.07e-10!448;UBERON:0000479!9.73e-10!787;UBERON:0007023!4.47e-08!115;UBERON:0000468!1.20e-07!659;UBERON:0000467!1.22e-07!625;UBERON:0000480!1.75e-07!626|ontology_enrichment_uberon_v019=UBERON:0000178;2.57e-08;15!UBERON:0000179;2.57e-08;15!UBERON:0000463;2.57e-08;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.74e-45,98;UBERON:0003061,2.74e-45,98;UBERON:0002193,9.24e-41,108;UBERON:0002371,4.55e-40,76;UBERON:0001474,2.98e-35,82;UBERON:0002405,5.21e-33,93;UBERON:0004765,6.98e-30,90;UBERON:0001434,1.32e-27,100;UBERON:0000926,1.42e-25,315;UBERON:0004120,1.42e-25,315;UBERON:0006603,1.42e-25,315;UBERON:0002204,3.20e-25,167;UBERON:0003081,2.03e-23,203;UBERON:0002384,1.25e-18,371;UBERON:0000479,3.39e-09,773;UBERON:0000178,2.19e-08,15;UBERON:0000179,2.19e-08,15;UBERON:0000463,2.19e-08,15|phase1_expression=1.99846217197612,3.63970890614671,5.63817616383885,0,5.36353313312745,2.61701557230111,2.53299878168311,2.52687949370732,5.74608382039645,0,0,0,0,0.618831764800233,0.331397375727916,0.672325146451775,0.602694528023977,0,0.487932798790507,0,0,0,0.286235987131057,0,0,0,0,0,3.54027849164014,1.91914699048606,2.47705797305722,0,0.6024118375565,1.84877005083394,0,0,1.17440175733939,2.76997704265939,4.01088894940283,3.47217393145363,3.80656306207871,2.26725566213286,0.515151135268373,6.68831898385998,4.91238726795452,4.12392904019288,8.83230340241602,6.16751832032739,5.57471467611186,10.6446185159196,8.19714260893122,5.91205574721463,8.96338769915208,4.51839278508678,2.70852973188684,8.28266293987461,10.0975275521403,7.19115150224271,11.6311879100943,7.06043859567406,7.03270838378945,7.91643120448119,5.98390972864896,3.83602275479425,13.6398342155434,3.97169657283798,12.4564449799115,11.5574386018102,6.25779502104242,4.99534342821768,9.6863920421339,6.62899744777616,4.1140110367315,9.0839773114135,10.8428192982172,7.54771123830153,6.9643751310827,6.00707571366025,4.8217676009124,9.4054205434612,11.3382506003481,12.6038266097597,0,0.546138611262131,0,0.426730222566507,0,0,1.32208974556972,0,0,0,0,0,0.560508562981536,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.301150238155546,0.255973222308837,0,0.236777252044017,0.821127996921047,0,0,0,0,2.01210257911091,0.12786256184353,1.44575660953827,0.50133791063589,1.30361867064741,0,1.94653948121054,0,0,0,1.24430121722827,0.364295288292542,0,2.27183175558278,1.74129737299267,3.58986493400936,0,0.571994910780128,0.74291500265913,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0.488124115096339,0,0,0.0892997282840798,0,0,0,0,0,30.3094960102945,23.2668158488995,0,0.496971951695318,0.25326102332916,11.2547803691236,1.43418310374407,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7439 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12703 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc010rlv.1_5end | |||
|coexpression_cluster_id=C246 | |||
|description=CAGE_peak_2_at_BEST1_5end | |||
|id=chr11:61722670..61722712,+ | |||
|ontology_enrichment_celltype=CL:0000766!3.44e-33!76;CL:0002194!1.66e-28!63;CL:0000576!1.66e-28!63;CL:0000040!1.66e-28!63;CL:0000559!1.66e-28!63;CL:0002057!4.61e-28!42;CL:0002009!1.49e-26!65;CL:0000557!1.96e-26!71;CL:0000839!3.51e-26!70;CL:0000860!2.60e-24!45;CL:0000048!2.33e-17!430;CL:0000763!7.17e-17!112;CL:0000049!7.17e-17!112;CL:0000723!1.56e-16!436;CL:0000034!2.44e-15!444;CL:0002320!1.13e-13!365;CL:0000134!1.54e-13!358;CL:0000219!6.55e-10!390;CL:0000738!3.72e-08!140;CL:0002393!3.44e-07!9;CL:0002397!3.44e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.66e-28;33!CL:0002057;1.66e-28;33!CL:0000473;1.75e-27;39!CL:0000234;1.75e-27;39!CL:0000576;7.94e-26;48!CL:0000766;8.35e-23;69!CL:0000763;6.57e-11;100!CL:0000094;1.62e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.54e-52,72;CL:0002194,1.01e-44,59;CL:0000576,1.01e-44,59;CL:0000040,1.01e-44,59;CL:0000559,1.01e-44,59;CL:0000473,3.54e-44,48;CL:0000234,3.54e-44,48;CL:0000557,7.17e-43,67;CL:0000839,1.60e-42,66;CL:0002009,1.77e-42,61;CL:0000860,7.44e-40,42;CL:0002057,7.44e-40,42;CL:0000763,1.26e-31,108;CL:0000049,1.26e-31,108;CL:0000134,1.17e-20,354;CL:0000048,1.23e-20,427;CL:0000723,4.48e-20,433;CL:0002320,2.28e-19,361;CL:0000034,9.02e-19,441;CL:0000738,4.24e-18,136;CL:0000219,7.71e-17,386;CL:0002087,4.84e-15,115;CL:0002031,5.78e-14,120;CL:0000037,8.18e-14,168;CL:0002032,2.48e-13,161;CL:0000837,2.48e-13,161;CL:0000988,6.49e-12,177;CL:0002393,1.10e-09,9;CL:0002397,1.10e-09,9;CL:0000094,9.56e-09,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.54e-28;42!CL:0000049;2.71e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.12e-29!102;UBERON:0003061!7.12e-29!102;UBERON:0002204!4.82e-26!167;UBERON:0002371!7.99e-26!80;UBERON:0002193!1.03e-25!112;UBERON:0001474!6.04e-22!86;UBERON:0004765!2.11e-19!101;UBERON:0001434!2.11e-19!101;UBERON:0003081!5.69e-16!216;UBERON:0002405!1.62e-15!115;UBERON:0002384!8.41e-13!375;UBERON:0000926!1.07e-10!448;UBERON:0004120!1.07e-10!448;UBERON:0006603!1.07e-10!448;UBERON:0000479!9.73e-10!787;UBERON:0007023!4.47e-08!115;UBERON:0000468!1.20e-07!659;UBERON:0000467!1.22e-07!625;UBERON:0000480!1.75e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.57e-08;15!UBERON:0000179;2.57e-08;15!UBERON:0000463;2.57e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.74e-45,98;UBERON:0003061,2.74e-45,98;UBERON:0002193,9.24e-41,108;UBERON:0002371,4.55e-40,76;UBERON:0001474,2.98e-35,82;UBERON:0002405,5.21e-33,93;UBERON:0004765,6.98e-30,90;UBERON:0001434,1.32e-27,100;UBERON:0000926,1.42e-25,315;UBERON:0004120,1.42e-25,315;UBERON:0006603,1.42e-25,315;UBERON:0002204,3.20e-25,167;UBERON:0003081,2.03e-23,203;UBERON:0002384,1.25e-18,371;UBERON:0000479,3.39e-09,773;UBERON:0000178,2.19e-08,15;UBERON:0000179,2.19e-08,15;UBERON:0000463,2.19e-08,15 | |||
|phase1_expression=1.99846217197612,3.63970890614671,5.63817616383885,0,5.36353313312745,2.61701557230111,2.53299878168311,2.52687949370732,5.74608382039645,0,0,0,0,0.618831764800233,0.331397375727916,0.672325146451775,0.602694528023977,0,0.487932798790507,0,0,0,0.286235987131057,0,0,0,0,0,3.54027849164014,1.91914699048606,2.47705797305722,0,0.6024118375565,1.84877005083394,0,0,1.17440175733939,2.76997704265939,4.01088894940283,3.47217393145363,3.80656306207871,2.26725566213286,0.515151135268373,6.68831898385998,4.91238726795452,4.12392904019288,8.83230340241602,6.16751832032739,5.57471467611186,10.6446185159196,8.19714260893122,5.91205574721463,8.96338769915208,4.51839278508678,2.70852973188684,8.28266293987461,10.0975275521403,7.19115150224271,11.6311879100943,7.06043859567406,7.03270838378945,7.91643120448119,5.98390972864896,3.83602275479425,13.6398342155434,3.97169657283798,12.4564449799115,11.5574386018102,6.25779502104242,4.99534342821768,9.6863920421339,6.62899744777616,4.1140110367315,9.0839773114135,10.8428192982172,7.54771123830153,6.9643751310827,6.00707571366025,4.8217676009124,9.4054205434612,11.3382506003481,12.6038266097597,0,0.546138611262131,0,0.426730222566507,0,0,1.32208974556972,0,0,0,0,0,0.560508562981536,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.301150238155546,0.255973222308837,0,0.236777252044017,0.821127996921047,0,0,0,0,2.01210257911091,0.12786256184353,1.44575660953827,0.50133791063589,1.30361867064741,0,1.94653948121054,0,0,0,1.24430121722827,0.364295288292542,0,2.27183175558278,1.74129737299267,3.58986493400936,0,0.571994910780128,0.74291500265913,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0.488124115096339,0,0,0.0892997282840798,0,0,0,0,0,30.3094960102945,23.2668158488995,0,0.496971951695318,0.25326102332916,11.2547803691236,1.43418310374407,0.709336764396714,0,2.1349799145941,0,0.311211035399766,0.942974704487816,0.490385709340376,0.151357427644931,0,2.57753575017176,0.936480230490962,0.570471821544449,1.19558944441441,0.352303495931295,0.485618833104395,0,1.02077085627447,0.491337269247072,2.16984140469107,1.18800285728205,2.22540236350701,0,1.43723628363248,0.168336113954066,0,0.831192346452549,0,1.5324389789951,2.85452311922534,0.113432183160021,0.89694817844431,2.13557388818567,1.90738711043606,1.50045548042201,1.64884046781502,4.89517026086695,1.11670113798954,1.0126579934476,0.584622030967192,1.7670364197088,1.84099797284599,1.61646056818812,0.355009592516614,0,0,0.193260853163297,0,0,0,0,0,0,0,0,3.12899064659632,1.28648187638577,1.38134921352481,1.85747171212792,2.88751792667834,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0.491953754172454,0.343135620597051,0.109750285408626,1.1240175325762,0,0,1.3032332212413,0,0,0.231860809950154,0,0.144366447761074,0,0,0,0,2.95460407304877,3.51006397708857,3.56714789492948,0,0,0,0.0895585227028483,0,0,0,0,2.48793738648926,2.45003920808834,2.65109110195398,0.317489471460845,0.381988425558278,0,1.71072446022705,0.102827492703324,0.600686115687835,0,0.224262168690721,0.43596006883328,0.51336800074665,0.775630294546667,10.7296933755565,0,0.797814349754612,2.08014873822732,0.514414748524284,0,0.266422179016099,1.14382394926518,6.51145926469732,0,0.325736184293735,0.355391948742546,0.791951872933429,1.50719688529793,0,0.799783929456456,3.64871341923571,2.00902836572851,2.10833939483032,0.239624855491583,0,1.42636905040718,0.868687840005475,1.43833425785268,0.537182889719687,0,0,0,0,0,0,0,0.167516265334349,0,19.4741826226267,38.8909896965232,23.621684265854,0.858840442033979,0,0.542530047399471,0.415941723061614,0.356857977594324,0.473107245101804,0.234282829985426,0.601892199455438,2.27407504055985,2.0694614258501,0,0.368738337083406,0.695068915744663,0.391602314925481,0.343143423810856,1.24060815673732,1.94142780736755,1.28073069364133,0,0,0,4.46594054073798,3.37616341233737,1.40330047216537,3.07533958213682,2.04682899626681,2.2519548960105,8.90508398669946,0.154209693802656,0.710246901252508,0.657017248110473,1.03850885836724,0.232420756919918,0.241718899183244,0,1.01289087829486,1.60740227430449,1.63882051206045,2.09799063935079,0,0.15403067420883,0.784349769176855,0,0,0,0,0,0,0.270946437543853,0,0.254876273045038,0.831076008928724,0,0,0,0,0,0,1.13345112812495,0,0,0,0,0,1.16004861950546,0.924291702687866,0.921022048356777,0.551346289938122,1.39646318328756,1.59518363305651,0.767039646744908,0.356128142586949,0.991709492165869,0.384380134730212,0.127612712494584,1.31505115112215,1.39453664789186,4.09256050879832,3.485186350803,0.924100740528266,0.532306030317022,2.60979897622522,1.11194531462352,0.572499546967965,0,0.632758849437452,1.33441135746677,1.02359116524534,1.28381696410176,2.86382923133343,2.35484592059769,0.359744915166629,0.54907405947211,1.06031162111118,0.808729926293264,0,0.842516912477962,0.48763373908959,3.41198885483798,1.05650146756755,1.36499911407986,2.96951407102797,1.13008116620243,1.10273068709225,0,0.438450885253763,0.578775534266688,0,0.40582075392540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| |||
|short_description=p2@BEST1 | |||
}} |
Revision as of 18:27, 10 September 2013
Short description: | p2@BEST1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_BEST1_5end |
Coexpression cluster: | C246_Neutrophils_Eosinophils_Whole_CD14_CD14CD16_Basophils_migratory |
Association with transcript: | 0bp_to_uc010rlv.1_5end |
EntrezGene: | BEST1 |
HGNC: | 12703 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.74e-45 | 98 |
blood island | 2.74e-45 | 98 |
hemolymphoid system | 9.24e-41 | 108 |
bone marrow | 4.55e-40 | 76 |
bone element | 2.98e-35 | 82 |
immune system | 5.21e-33 | 93 |
skeletal element | 6.98e-30 | 90 |
skeletal system | 1.32e-27 | 100 |
mesoderm | 1.42e-25 | 315 |
mesoderm-derived structure | 1.42e-25 | 315 |
presumptive mesoderm | 1.42e-25 | 315 |
musculoskeletal system | 3.20e-25 | 167 |
lateral plate mesoderm | 2.03e-23 | 203 |
connective tissue | 1.25e-18 | 371 |
tissue | 3.39e-09 | 773 |
blood | 2.19e-08 | 15 |
haemolymphatic fluid | 2.19e-08 | 15 |
organism substance | 2.19e-08 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.