FFCP PHASE1:Hg19::chr11:75279846..75279855,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:75279846..75279855,+|id=chr11:75279846..75279855,+|ontology_enrichment_celltype=CL:0000055!1.21e-25!180;CL:0000057!6.48e-20!75;CL:0000144!8.91e-13!625;CL:0000222!1.42e-11!119;CL:0000393!5.91e-11!60;CL:0000211!5.91e-11!60;CL:0000548!7.09e-11!679;CL:0000004!7.09e-11!679;CL:0000255!7.09e-11!679;CL:0000012!2.06e-10!682;CL:0002371!2.38e-10!591;CL:0000187!7.34e-10!54;CL:0000183!1.08e-09!59;CL:0002321!1.40e-09!248;CL:0000680!1.82e-09!57;CL:0000056!1.82e-09!57;CL:0000355!1.82e-09!57;CL:0000220!4.44e-09!246;CL:0000192!2.01e-07!42;CL:0000514!2.01e-07!42;CL:0002620!7.23e-07!23|ontology_enrichment_celltype_v019=CL:0000134;1.11e-08;55!CL:0000034;3.31e-08;69!CL:0000048;1.33e-07;58!CL:0002569;2.83e-07;6!CL:0000499;4.76e-07;28!CL:0000135;5.59e-07;3!CL:0000388;5.59e-07;3|ontology_enrichment_celltype_v019_2=CL:0000057,7.92e-12,76;CL:0000048,1.84e-10,427;CL:0000034,2.31e-10,441;CL:0000723,5.29e-10,433;CL:0000393,2.26e-08,61;CL:0000211,2.26e-08,61;CL:0000680,3.50e-08,58;CL:0000056,3.50e-08,58;CL:0000355,3.50e-08,58;CL:0000187,5.96e-08,55;CL:0002569,3.07e-07,6;CL:0000192,3.10e-07,43;CL:0000514,3.10e-07,43;CL:0000499,5.23e-07,28;CL:0000135,5.93e-07,3;CL:0000388,5.93e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000914!8.13e-11!83;UBERON:0002329!8.13e-11!83;UBERON:0003077!8.13e-11!83;UBERON:0003059!8.13e-11!83;UBERON:0007282!8.13e-11!83;UBERON:0009618!8.13e-11!83;UBERON:0007285!8.13e-11!83;UBERON:0004290!3.77e-09!70;UBERON:0001134!1.06e-08!61;UBERON:0002036!1.06e-08!61;UBERON:0003082!1.06e-08!61;UBERON:0005256!1.41e-08!143;UBERON:0000486!2.08e-08!82;UBERON:0004872!5.17e-08!84;UBERON:0002385!5.70e-08!63;UBERON:0001015!5.70e-08!63;UBERON:0000383!5.70e-08!63;UBERON:0002100!1.55e-07!216;UBERON:0002049!3.41e-07!79;UBERON:0007798!3.41e-07!79;UBERON:0001981!3.84e-07!60;UBERON:0007500!3.84e-07!60;UBERON:0004537!3.84e-07!60;UBERON:0006965!3.84e-07!60;UBERON:0000490!7.70e-07!138;UBERON:0003102!9.99e-07!95|ontology_enrichment_uberon_v019=UBERON:0003422;2.83e-07;6!UBERON:0007846;5.59e-07;3!UBERON:0000043;5.59e-07;3!UBERON:0007845;5.59e-07;3!UBERON:0001013;7.44e-07;14|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.84e-08,78;UBERON:0001134,3.69e-08,62;UBERON:0002036,3.69e-08,62;UBERON:0003082,3.69e-08,62;UBERON:0005256,5.60e-08,122;UBERON:0002385,1.01e-07,64;UBERON:0001015,1.01e-07,64;UBERON:0000383,1.01e-07,64;UBERON:0002329,2.96e-07,71;UBERON:0003059,2.96e-07,71;UBERON:0007282,2.96e-07,71;UBERON:0004290,2.96e-07,71;UBERON:0009618,2.96e-07,71;UBERON:0003422,3.07e-07,6;UBERON:0003104,4.39e-07,160;UBERON:0009142,4.39e-07,160;UBERON:0003077,4.50e-07,72;UBERON:0007285,4.50e-07,72;UBERON:0007846,5.93e-07,3;UBERON:0000043,5.93e-07,3;UBERON:0007845,5.93e-07,3;UBERON:0001013,6.59e-07,14;UBERON:0007524,6.76e-07,73;UBERON:0001135,9.29e-07,15|phase1_expression=0.54503513781167,3.21150785836475,0.563817616383885,3.00219895059391,2.23480547213644,3.48935409640147,2.53299878168311,0,0.783556884599516,0.245733936501509,6.28021051175185,0,0.527533956456907,0.123766352960047,0.994192127183747,8.0679017574213,5.42425075221579,7.30310090387373,2.43966399395253,0,1.42800483870977,0.940364164434263,0,0.273748850145768,0.627713197974014,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35350429851818,1.15076305659177,0.361439152384566,0.50133791063589,1.15877215168659,0,1.45990461090791,0.189069634328136,0.665188192387692,0.087834785693126,0.0654895377488563,0.364295288292542,0.370784442784429,0,0.348259474598534,0,0,0,0,0,0,0.694281003215189,0,0.838998872419812,1.37559020970034,0.417989933073621,0.258416759169329,0,0,0,1.52054421143703,0.488124115096339,0,2.43042584364528,0.0892997282840798,0.22452937262617,0.450445921933289,0,0,0.366403487860815,0,0,0,0.496971951695318,1.39293562831038,0.264818361626438,7.74458876021797,2.12801029319014,8.97084160227691,3.20246987189115,2.71334303258876,0,0.538842688278752,1.14423332179421,0.605429710579726,1.72852777344,0.234321431833797,0.312160076830321,0,0.149448680551801,0.822041490506354,0.809364721840658,0.561803226808994,0.61246251376468,1.10550885580591,0.413303124703062,0,1.23633464639278,0,2.87447256726495,0.505008341862199,0.625592599359821,0,1.75591048352335,3.0648779579902,1.50238058906597,0.567160915800105,0.89694817844431,1.2813443329114,0.635795703478686,1.80054657650641,0.721367704669072,3.86460810068444,2.04728541964749,0.506328996723799,0.876933046450788,1.51460264546469,0.460249493211497,0.484938170456436,4.61512470271599,0.7052646875934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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:75279846..75279855,+ | |||
|id=chr11:75279846..75279855,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.21e-25!180;CL:0000057!6.48e-20!75;CL:0000144!8.91e-13!625;CL:0000222!1.42e-11!119;CL:0000393!5.91e-11!60;CL:0000211!5.91e-11!60;CL:0000548!7.09e-11!679;CL:0000004!7.09e-11!679;CL:0000255!7.09e-11!679;CL:0000012!2.06e-10!682;CL:0002371!2.38e-10!591;CL:0000187!7.34e-10!54;CL:0000183!1.08e-09!59;CL:0002321!1.40e-09!248;CL:0000680!1.82e-09!57;CL:0000056!1.82e-09!57;CL:0000355!1.82e-09!57;CL:0000220!4.44e-09!246;CL:0000192!2.01e-07!42;CL:0000514!2.01e-07!42;CL:0002620!7.23e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000134;1.11e-08;55!CL:0000034;3.31e-08;69!CL:0000048;1.33e-07;58!CL:0002569;2.83e-07;6!CL:0000499;4.76e-07;28!CL:0000135;5.59e-07;3!CL:0000388;5.59e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.92e-12,76;CL:0000048,1.84e-10,427;CL:0000034,2.31e-10,441;CL:0000723,5.29e-10,433;CL:0000393,2.26e-08,61;CL:0000211,2.26e-08,61;CL:0000680,3.50e-08,58;CL:0000056,3.50e-08,58;CL:0000355,3.50e-08,58;CL:0000187,5.96e-08,55;CL:0002569,3.07e-07,6;CL:0000192,3.10e-07,43;CL:0000514,3.10e-07,43;CL:0000499,5.23e-07,28;CL:0000135,5.93e-07,3;CL:0000388,5.93e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!8.13e-11!83;UBERON:0002329!8.13e-11!83;UBERON:0003077!8.13e-11!83;UBERON:0003059!8.13e-11!83;UBERON:0007282!8.13e-11!83;UBERON:0009618!8.13e-11!83;UBERON:0007285!8.13e-11!83;UBERON:0004290!3.77e-09!70;UBERON:0001134!1.06e-08!61;UBERON:0002036!1.06e-08!61;UBERON:0003082!1.06e-08!61;UBERON:0005256!1.41e-08!143;UBERON:0000486!2.08e-08!82;UBERON:0004872!5.17e-08!84;UBERON:0002385!5.70e-08!63;UBERON:0001015!5.70e-08!63;UBERON:0000383!5.70e-08!63;UBERON:0002100!1.55e-07!216;UBERON:0002049!3.41e-07!79;UBERON:0007798!3.41e-07!79;UBERON:0001981!3.84e-07!60;UBERON:0007500!3.84e-07!60;UBERON:0004537!3.84e-07!60;UBERON:0006965!3.84e-07!60;UBERON:0000490!7.70e-07!138;UBERON:0003102!9.99e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0003422;2.83e-07;6!UBERON:0007846;5.59e-07;3!UBERON:0000043;5.59e-07;3!UBERON:0007845;5.59e-07;3!UBERON:0001013;7.44e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.84e-08,78;UBERON:0001134,3.69e-08,62;UBERON:0002036,3.69e-08,62;UBERON:0003082,3.69e-08,62;UBERON:0005256,5.60e-08,122;UBERON:0002385,1.01e-07,64;UBERON:0001015,1.01e-07,64;UBERON:0000383,1.01e-07,64;UBERON:0002329,2.96e-07,71;UBERON:0003059,2.96e-07,71;UBERON:0007282,2.96e-07,71;UBERON:0004290,2.96e-07,71;UBERON:0009618,2.96e-07,71;UBERON:0003422,3.07e-07,6;UBERON:0003104,4.39e-07,160;UBERON:0009142,4.39e-07,160;UBERON:0003077,4.50e-07,72;UBERON:0007285,4.50e-07,72;UBERON:0007846,5.93e-07,3;UBERON:0000043,5.93e-07,3;UBERON:0007845,5.93e-07,3;UBERON:0001013,6.59e-07,14;UBERON:0007524,6.76e-07,73;UBERON:0001135,9.29e-07,15 | |||
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| |||
|short_description=p@chr11:75279846..75279855,+ | |||
}} |
Revision as of 19:42, 10 September 2013
Short description: | p@chr11:75279846..75279855, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:75279846..75279855, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.92e-12 | 76 |
multi fate stem cell | 1.84e-10 | 427 |
stem cell | 2.31e-10 | 441 |
somatic stem cell | 5.29e-10 | 433 |
electrically responsive cell | 2.26e-08 | 61 |
electrically active cell | 2.26e-08 | 61 |
muscle precursor cell | 3.50e-08 | 58 |
myoblast | 3.50e-08 | 58 |
multi-potent skeletal muscle stem cell | 3.50e-08 | 58 |
muscle cell | 5.96e-08 | 55 |
mesenchymal stem cell of umbilical cord | 3.07e-07 | 6 |
smooth muscle cell | 3.10e-07 | 43 |
smooth muscle myoblast | 3.10e-07 | 43 |
stromal cell | 5.23e-07 | 28 |
fibrocyte | 5.93e-07 | 3 |
tendon cell | 5.93e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 1.84e-08 | 78 |
skeletal muscle tissue | 3.69e-08 | 62 |
striated muscle tissue | 3.69e-08 | 62 |
myotome | 3.69e-08 | 62 |
trunk mesenchyme | 5.60e-08 | 122 |
muscle tissue | 1.01e-07 | 64 |
musculature | 1.01e-07 | 64 |
musculature of body | 1.01e-07 | 64 |
somite | 2.96e-07 | 71 |
presomitic mesoderm | 2.96e-07 | 71 |
presumptive segmental plate | 2.96e-07 | 71 |
dermomyotome | 2.96e-07 | 71 |
trunk paraxial mesoderm | 2.96e-07 | 71 |
mesenchyme of umbilical cord | 3.07e-07 | 6 |
mesenchyme | 4.39e-07 | 160 |
entire embryonic mesenchyme | 4.39e-07 | 160 |
paraxial mesoderm | 4.50e-07 | 72 |
presumptive paraxial mesoderm | 4.50e-07 | 72 |
dense regular connective tissue | 5.93e-07 | 3 |
tendon | 5.93e-07 | 3 |
regular connective tissue | 5.93e-07 | 3 |
adipose tissue | 6.59e-07 | 14 |
dense mesenchyme tissue | 6.76e-07 | 73 |
smooth muscle tissue | 9.29e-07 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.