FFCP PHASE1:Hg19::chr12:111843666..111843736,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10019 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29605 | |||
|TSSclassifier=S | |||
|UniProt=Q9UQQ2,Q59H48 | |||
|association_with_transcript=-15bp_to_ENST00000341259,NM_005475,uc001tse.2_5end | |||
|description=CAGE_peak_1_at_SH2B3_5end | |||
|id=chr12:111843666..111843736,+ | |||
|ontology_enrichment_celltype=CL:0000763!1.51e-29!112;CL:0000049!1.51e-29!112;CL:0000766!9.62e-29!76;CL:0000557!5.57e-28!71;CL:0000839!6.97e-27!70;CL:0002009!3.65e-26!65;CL:0000048!1.38e-25!430;CL:0002057!1.61e-25!42;CL:0002194!6.61e-25!63;CL:0000576!6.61e-25!63;CL:0000040!6.61e-25!63;CL:0000559!6.61e-25!63;CL:0000723!3.71e-24!436;CL:0000988!1.24e-23!182;CL:0000034!2.10e-23!444;CL:0000037!7.35e-23!172;CL:0000566!7.35e-23!172;CL:0000738!1.90e-21!140;CL:0002320!1.92e-21!365;CL:0002371!2.42e-21!591;CL:0000860!2.61e-21!45;CL:0002032!1.23e-20!165;CL:0000837!1.23e-20!165;CL:0000134!2.51e-20!358;CL:0000219!4.26e-18!390;CL:0000144!1.08e-16!625;CL:0002031!1.12e-16!124;CL:0002087!3.72e-15!119;CL:0000115!3.38e-13!35;CL:0002139!7.49e-10!24;CL:0002078!1.49e-09!44;CL:0000071!1.86e-08!18;CL:0002546!1.86e-08!18;CL:0000222!4.18e-07!119;CL:0002393!8.21e-07!9;CL:0002397!8.21e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.71e-18;33!CL:0002057;1.71e-18;33!CL:0000473;9.68e-18;39!CL:0000234;9.68e-18;39!CL:0000576;9.15e-16;48!CL:0000766;1.79e-14;69!CL:0000115;7.73e-12;36!CL:0002139;7.28e-10;24!CL:0000763;2.29e-09;100!CL:0000071;1.67e-08;18!CL:0002078;9.06e-07;45 | |||
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|ontology_enrichment_development_v019=CL:0002057;1.21e-18;42!CL:0000049;2.63e-09;108!CL:0002546;1.67e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.93e-31!112;UBERON:0003081!7.69e-29!216;UBERON:0002390!2.58e-28!102;UBERON:0003061!2.58e-28!102;UBERON:0002371!1.78e-27!80;UBERON:0001474!5.20e-24!86;UBERON:0002405!1.74e-22!115;UBERON:0002384!6.97e-22!375;UBERON:0004765!9.47e-21!101;UBERON:0001434!9.47e-21!101;UBERON:0002204!5.46e-20!167;UBERON:0001009!6.32e-15!113;UBERON:0004535!1.81e-14!110;UBERON:0002049!5.46e-11!79;UBERON:0007798!5.46e-11!79;UBERON:0000055!1.68e-09!69;UBERON:0001986!1.86e-08!18;UBERON:0004638!1.86e-08!18;UBERON:0004852!1.86e-08!18;UBERON:0001981!2.17e-07!60;UBERON:0007500!2.17e-07!60;UBERON:0004537!2.17e-07!60;UBERON:0006965!2.17e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.67e-08;18!UBERON:0001986;1.67e-08;18!UBERON:0004852;1.67e-08;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.30e-34,108;UBERON:0002390,2.96e-31,98;UBERON:0003061,2.96e-31,98;UBERON:0002405,3.54e-31,93;UBERON:0002371,6.63e-31,76;UBERON:0003081,1.48e-30,203;UBERON:0001474,5.71e-27,82;UBERON:0004765,5.14e-24,90;UBERON:0001434,3.68e-23,100;UBERON:0002384,9.55e-23,371;UBERON:0000926,1.07e-22,315;UBERON:0004120,1.07e-22,315;UBERON:0006603,1.07e-22,315;UBERON:0002204,1.11e-21,167;UBERON:0001009,6.26e-15,112;UBERON:0004535,1.79e-14,109;UBERON:0002049,5.31e-11,78;UBERON:0007798,5.31e-11,78;UBERON:0000055,1.64e-09,68;UBERON:0004638,1.86e-08,18;UBERON:0001986,1.86e-08,18;UBERON:0004852,1.86e-08,18;UBERON:0007500,2.15e-07,59;UBERON:0001981,2.15e-07,59;UBERON:0004537,2.15e-07,59;UBERON:0006965,2.15e-07,59 | |||
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| |||
|short_description=p1@SH2B3 | |||
}} |
Revision as of 20:53, 10 September 2013
Short description: | p1@SH2B3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SH2B3_5end |
Coexpression cluster: | NA |
Association with transcript: | -15bp_to_ENST00000341259, NM_005475, uc001tse.2_5end |
EntrezGene: | SH2B3 |
HGNC: | 29605 |
UniProt: | Q9UQQ2Q59H48 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 3.30e-34 | 108 |
hematopoietic system | 2.96e-31 | 98 |
blood island | 2.96e-31 | 98 |
immune system | 3.54e-31 | 93 |
bone marrow | 6.63e-31 | 76 |
lateral plate mesoderm | 1.48e-30 | 203 |
bone element | 5.71e-27 | 82 |
skeletal element | 5.14e-24 | 90 |
skeletal system | 3.68e-23 | 100 |
connective tissue | 9.55e-23 | 371 |
mesoderm | 1.07e-22 | 315 |
mesoderm-derived structure | 1.07e-22 | 315 |
presumptive mesoderm | 1.07e-22 | 315 |
musculoskeletal system | 1.11e-21 | 167 |
circulatory system | 6.26e-15 | 112 |
cardiovascular system | 1.79e-14 | 109 |
vasculature | 5.31e-11 | 78 |
vascular system | 5.31e-11 | 78 |
vessel | 1.64e-09 | 68 |
blood vessel endothelium | 1.86e-08 | 18 |
endothelium | 1.86e-08 | 18 |
cardiovascular system endothelium | 1.86e-08 | 18 |
epithelial tube open at both ends | 2.15e-07 | 59 |
blood vessel | 2.15e-07 | 59 |
blood vasculature | 2.15e-07 | 59 |
vascular cord | 2.15e-07 | 59 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.