FFCP PHASE1:Hg19::chr12:51788051..51788059,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C0|description=CAGE_peak_at_chr12:51788051..51788059,-|id=chr12:51788051..51788059,-|ontology_enrichment_celltype=CL:0002057!8.66e-50!42;CL:0000860!2.47e-48!45;CL:0000766!4.34e-43!76;CL:0000839!9.29e-41!70;CL:0000557!5.24e-40!71;CL:0000738!8.41e-37!140;CL:0002031!2.45e-35!124;CL:0002194!1.02e-34!63;CL:0000576!1.02e-34!63;CL:0000040!1.02e-34!63;CL:0000559!1.02e-34!63;CL:0002009!2.61e-33!65;CL:0002087!9.45e-31!119;CL:0002032!1.99e-27!165;CL:0000837!1.99e-27!165;CL:0000037!8.82e-27!172;CL:0000566!8.82e-27!172;CL:0000763!3.07e-26!112;CL:0000049!3.07e-26!112;CL:0000988!2.19e-24!182;CL:0000134!3.69e-11!358;CL:0002320!1.32e-10!365;CL:0002274!1.36e-10!5;CL:0000457!1.36e-10!5;CL:0002191!1.36e-10!5;CL:0000097!1.36e-10!5;CL:0000831!1.36e-10!5;CL:0002028!1.36e-10!5;CL:0000219!1.07e-09!390;CL:0000048!1.14e-09!430;CL:0000034!2.43e-09!444;CL:0000723!2.82e-09!436;CL:0000791!2.37e-07!18;CL:0000789!2.37e-07!18;CL:0002420!2.37e-07!18;CL:0002419!2.37e-07!18;CL:0000790!2.37e-07!18;CL:0002371!3.01e-07!591;CL:0000623!4.32e-07!3;CL:0000825!4.32e-07!3;CL:0000767!5.09e-07!3|ontology_enrichment_celltype_v019=CL:0000860;7.47e-103;33!CL:0002057;7.47e-103;33!CL:0000473;7.48e-69;39!CL:0000234;7.48e-69;39!CL:0000576;3.00e-50;48!CL:0000766;7.68e-40;69!CL:0000763;5.12e-18;100!CL:0002087;9.90e-16;104!CL:0000097;4.01e-11;5!CL:0000738;2.11e-09;136|ontology_enrichment_celltype_v019_2=CL:0000860,6.24e-94,42;CL:0002057,6.24e-94,42;CL:0000473,1.40e-81,48;CL:0000234,1.40e-81,48;CL:0000839,2.08e-71,66;CL:0000557,2.79e-70,67;CL:0000766,6.93e-70,72;CL:0002194,2.80e-64,59;CL:0000576,2.80e-64,59;CL:0000040,2.80e-64,59;CL:0000559,2.80e-64,59;CL:0002009,4.79e-62,61;CL:0000763,4.63e-45,108;CL:0000049,4.63e-45,108;CL:0002031,4.11e-43,120;CL:0000738,3.57e-40,136;CL:0002087,2.64e-36,115;CL:0002032,3.93e-33,161;CL:0000837,3.93e-33,161;CL:0000037,1.56e-31,168;CL:0000988,1.17e-29,177;CL:0000134,4.76e-12,354;CL:0002320,1.05e-11,361;CL:0000097,5.23e-11,5;CL:0002028,5.23e-11,5;CL:0000219,1.74e-10,386;CL:0000034,2.02e-09,441;CL:0000048,5.41e-09,427;CL:0000723,8.70e-09,433|ontology_enrichment_development_v019=CL:0002057;2.34e-71;42!CL:0000049;9.28e-13;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!4.30e-34!80;UBERON:0001474!7.68e-31!86;UBERON:0004765!6.94e-26!101;UBERON:0001434!6.94e-26!101;UBERON:0002390!1.96e-25!102;UBERON:0003061!1.96e-25!102;UBERON:0002193!1.38e-24!112;UBERON:0002405!2.38e-22!115;UBERON:0002204!1.33e-15!167;UBERON:0003081!7.90e-12!216;UBERON:0002384!7.46e-10!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.84e-61,76;UBERON:0001474,1.22e-56,82;UBERON:0004765,3.35e-51,90;UBERON:0002405,2.12e-49,93;UBERON:0002390,1.22e-46,98;UBERON:0003061,1.22e-46,98;UBERON:0001434,1.30e-45,100;UBERON:0002193,7.07e-42,108;UBERON:0002204,2.72e-25,167;UBERON:0003081,7.19e-20,203;UBERON:0002384,3.12e-11,371;UBERON:0000926,7.27e-11,315;UBERON:0004120,7.27e-11,315;UBERON:0006603,7.27e-11,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,0.767658796194425,0.619264493264304,0,0.30120591877825,0.739508020333575,0,0,0,0.553995408531877,0.802177789880567,1.73608696572681,0,0,0,0.872389432677388,2.26725566213286,0.970336244751265,1.62700325833979,6.16751832032739,3.09706370895104,2.58923153089935,1.7931249457037,4.96612682766029,6.20542225325913,4.51839278508678,8.12558919566051,0.752969358170419,1.09162460023138,2.02251136000576,2.44867113896722,2.88836124368484,2.55734850319616,0.989553900560148,1.39624560335142,0,2.61188314765726,2.26954089876456,1.24564449799115,3.26623264833766,2.60741459210101,4.77815458351257,1.81619850790011,2.20966581592539,5.37986058649504,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24203425192614,0,0.393419540227666,0.786021525498329,0.411202997999018,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0.506039384039006,0.318565414324097,0,0,0.150575119077773,0,0,0,0,0.604820229674197,0.802320587350522,1.01377082717959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0.348259474598534,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0.949265659568129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0,0,0,0,0.206105058476878,0,0,0.168776332241266,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.528290604079356,1.4512968087854,1.15295962733569,1.00993946741104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,3.23441362289276,0.77005821767849,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr12:51788051..51788059,- | |||
|id=chr12:51788051..51788059,- | |||
|ontology_enrichment_celltype=CL:0002057!8.66e-50!42;CL:0000860!2.47e-48!45;CL:0000766!4.34e-43!76;CL:0000839!9.29e-41!70;CL:0000557!5.24e-40!71;CL:0000738!8.41e-37!140;CL:0002031!2.45e-35!124;CL:0002194!1.02e-34!63;CL:0000576!1.02e-34!63;CL:0000040!1.02e-34!63;CL:0000559!1.02e-34!63;CL:0002009!2.61e-33!65;CL:0002087!9.45e-31!119;CL:0002032!1.99e-27!165;CL:0000837!1.99e-27!165;CL:0000037!8.82e-27!172;CL:0000566!8.82e-27!172;CL:0000763!3.07e-26!112;CL:0000049!3.07e-26!112;CL:0000988!2.19e-24!182;CL:0000134!3.69e-11!358;CL:0002320!1.32e-10!365;CL:0002274!1.36e-10!5;CL:0000457!1.36e-10!5;CL:0002191!1.36e-10!5;CL:0000097!1.36e-10!5;CL:0000831!1.36e-10!5;CL:0002028!1.36e-10!5;CL:0000219!1.07e-09!390;CL:0000048!1.14e-09!430;CL:0000034!2.43e-09!444;CL:0000723!2.82e-09!436;CL:0000791!2.37e-07!18;CL:0000789!2.37e-07!18;CL:0002420!2.37e-07!18;CL:0002419!2.37e-07!18;CL:0000790!2.37e-07!18;CL:0002371!3.01e-07!591;CL:0000623!4.32e-07!3;CL:0000825!4.32e-07!3;CL:0000767!5.09e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.47e-103;33!CL:0002057;7.47e-103;33!CL:0000473;7.48e-69;39!CL:0000234;7.48e-69;39!CL:0000576;3.00e-50;48!CL:0000766;7.68e-40;69!CL:0000763;5.12e-18;100!CL:0002087;9.90e-16;104!CL:0000097;4.01e-11;5!CL:0000738;2.11e-09;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.24e-94,42;CL:0002057,6.24e-94,42;CL:0000473,1.40e-81,48;CL:0000234,1.40e-81,48;CL:0000839,2.08e-71,66;CL:0000557,2.79e-70,67;CL:0000766,6.93e-70,72;CL:0002194,2.80e-64,59;CL:0000576,2.80e-64,59;CL:0000040,2.80e-64,59;CL:0000559,2.80e-64,59;CL:0002009,4.79e-62,61;CL:0000763,4.63e-45,108;CL:0000049,4.63e-45,108;CL:0002031,4.11e-43,120;CL:0000738,3.57e-40,136;CL:0002087,2.64e-36,115;CL:0002032,3.93e-33,161;CL:0000837,3.93e-33,161;CL:0000037,1.56e-31,168;CL:0000988,1.17e-29,177;CL:0000134,4.76e-12,354;CL:0002320,1.05e-11,361;CL:0000097,5.23e-11,5;CL:0002028,5.23e-11,5;CL:0000219,1.74e-10,386;CL:0000034,2.02e-09,441;CL:0000048,5.41e-09,427;CL:0000723,8.70e-09,433 | |||
|ontology_enrichment_development_v019=CL:0002057;2.34e-71;42!CL:0000049;9.28e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.30e-34!80;UBERON:0001474!7.68e-31!86;UBERON:0004765!6.94e-26!101;UBERON:0001434!6.94e-26!101;UBERON:0002390!1.96e-25!102;UBERON:0003061!1.96e-25!102;UBERON:0002193!1.38e-24!112;UBERON:0002405!2.38e-22!115;UBERON:0002204!1.33e-15!167;UBERON:0003081!7.90e-12!216;UBERON:0002384!7.46e-10!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.84e-61,76;UBERON:0001474,1.22e-56,82;UBERON:0004765,3.35e-51,90;UBERON:0002405,2.12e-49,93;UBERON:0002390,1.22e-46,98;UBERON:0003061,1.22e-46,98;UBERON:0001434,1.30e-45,100;UBERON:0002193,7.07e-42,108;UBERON:0002204,2.72e-25,167;UBERON:0003081,7.19e-20,203;UBERON:0002384,3.12e-11,371;UBERON:0000926,7.27e-11,315;UBERON:0004120,7.27e-11,315;UBERON:0006603,7.27e-11,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,0.767658796194425,0.619264493264304,0,0.30120591877825,0.739508020333575,0,0,0,0.553995408531877,0.802177789880567,1.73608696572681,0,0,0,0.872389432677388,2.26725566213286,0.970336244751265,1.62700325833979,6.16751832032739,3.09706370895104,2.58923153089935,1.7931249457037,4.96612682766029,6.20542225325913,4.51839278508678,8.12558919566051,0.752969358170419,1.09162460023138,2.02251136000576,2.44867113896722,2.88836124368484,2.55734850319616,0.989553900560148,1.39624560335142,0,2.61188314765726,2.26954089876456,1.24564449799115,3.26623264833766,2.60741459210101,4.77815458351257,1.81619850790011,2.20966581592539,5.37986058649504,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24203425192614,0,0.393419540227666,0.786021525498329,0.411202997999018,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0.506039384039006,0.318565414324097,0,0,0.150575119077773,0,0,0,0,0.604820229674197,0.802320587350522,1.01377082717959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0.348259474598534,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0.949265659568129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0,0,0,0,0.206105058476878,0,0,0.168776332241266,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.528290604079356,1.4512968087854,1.15295962733569,1.00993946741104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,3.23441362289276,0.77005821767849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0.318203247925937,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0,0,0,0,0,0,0,0,0,0.0821154570532092,0,0,0,0,0,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0.310525913752519,0,0,0,0,0,0,0.181848659202559,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0.211312123358627,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236664001461131,0.170426809518315,0,0,0,0,0,0.098150233615243,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.240724100067505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:51788051..51788059,- | |||
}} |
Revision as of 23:03, 10 September 2013
Short description: | p@chr12:51788051..51788059, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:51788051..51788059, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.24e-94 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.24e-94 | 42 |
defensive cell | 1.40e-81 | 48 |
phagocyte | 1.40e-81 | 48 |
myeloid lineage restricted progenitor cell | 2.08e-71 | 66 |
granulocyte monocyte progenitor cell | 2.79e-70 | 67 |
myeloid leukocyte | 6.93e-70 | 72 |
monopoietic cell | 2.80e-64 | 59 |
monocyte | 2.80e-64 | 59 |
monoblast | 2.80e-64 | 59 |
promonocyte | 2.80e-64 | 59 |
macrophage dendritic cell progenitor | 4.79e-62 | 61 |
myeloid cell | 4.63e-45 | 108 |
common myeloid progenitor | 4.63e-45 | 108 |
hematopoietic lineage restricted progenitor cell | 4.11e-43 | 120 |
leukocyte | 3.57e-40 | 136 |
nongranular leukocyte | 2.64e-36 | 115 |
hematopoietic oligopotent progenitor cell | 3.93e-33 | 161 |
hematopoietic multipotent progenitor cell | 3.93e-33 | 161 |
hematopoietic stem cell | 1.56e-31 | 168 |
hematopoietic cell | 1.17e-29 | 177 |
mesenchymal cell | 4.76e-12 | 354 |
connective tissue cell | 1.05e-11 | 361 |
mast cell | 5.23e-11 | 5 |
basophil mast progenitor cell | 5.23e-11 | 5 |
motile cell | 1.74e-10 | 386 |
stem cell | 2.02e-09 | 441 |
multi fate stem cell | 5.41e-09 | 427 |
somatic stem cell | 8.70e-09 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.84e-61 | 76 |
bone element | 1.22e-56 | 82 |
skeletal element | 3.35e-51 | 90 |
immune system | 2.12e-49 | 93 |
hematopoietic system | 1.22e-46 | 98 |
blood island | 1.22e-46 | 98 |
skeletal system | 1.30e-45 | 100 |
hemolymphoid system | 7.07e-42 | 108 |
musculoskeletal system | 2.72e-25 | 167 |
lateral plate mesoderm | 7.19e-20 | 203 |
connective tissue | 3.12e-11 | 371 |
mesoderm | 7.27e-11 | 315 |
mesoderm-derived structure | 7.27e-11 | 315 |
presumptive mesoderm | 7.27e-11 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.