FFCP PHASE1:Hg19::chr12:59989773..59989790,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9194|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10928|TSSclassifier=S|UniProt=|association_with_transcript=-57bp_to_ENST00000552432,uc001sqs.2,uc001sqt.2_5end|description=CAGE_peak_4_at_SLC16A7_5end|id=chr12:59989773..59989790,+|ontology_enrichment_celltype=CL:0002087!3.60e-13!119;CL:0002031!1.94e-11!124;CL:0000738!1.10e-09!140;CL:0000838!1.27e-09!52;CL:0000542!4.49e-09!53;CL:0000051!4.49e-09!53|ontology_enrichment_celltype_v019=CL:0000236;2.67e-10;13!CL:0000625;2.37e-07;11!CL:0000542;3.46e-07;53!CL:0000945;3.64e-07;24|ontology_enrichment_celltype_v019_2=CL:0000838,3.16e-11,52;CL:0000542,6.70e-11,53;CL:0000051,6.70e-11,53;CL:0000236,6.68e-10,14;CL:0002087,1.27e-07,115;CL:0000945,2.17e-07,24;CL:0000826,2.17e-07,24;CL:0000625,2.28e-07,11;CL:0002031,5.54e-07,120|ontology_enrichment_development_v019=CL:0000051;3.46e-07;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!8.32e-13!115;UBERON:0001869!3.04e-10!32;UBERON:0001893!5.18e-10!34;UBERON:0002780!5.91e-10!41;UBERON:0001890!5.91e-10!41;UBERON:0006240!5.91e-10!41;UBERON:0002020!8.28e-10!34;UBERON:0003528!8.28e-10!34;UBERON:0002791!1.75e-09!33;UBERON:0002616!2.04e-09!59;UBERON:0003080!2.59e-09!42;UBERON:0002619!2.71e-09!22;UBERON:0001049!2.81e-09!57;UBERON:0005068!2.81e-09!57;UBERON:0006241!2.81e-09!57;UBERON:0007135!2.81e-09!57;UBERON:0001950!3.77e-09!20;UBERON:0000956!5.22e-09!25;UBERON:0000203!5.22e-09!25;UBERON:0002390!4.01e-08!102;UBERON:0003061!4.01e-08!102;UBERON:0000955!2.92e-07!69;UBERON:0006238!2.92e-07!69;UBERON:0001017!6.57e-07!82;UBERON:0002193!6.77e-07!112|ontology_enrichment_uberon_v019=UBERON:0001950;1.17e-15;20!UBERON:0002619;6.20e-14;22!UBERON:0000956;7.41e-12;25!UBERON:0000203;7.41e-12;25!UBERON:0001869;9.04e-11;32!UBERON:0001893;9.83e-10;34!UBERON:0002791;2.68e-09;32!UBERON:0002021;9.15e-09;5!UBERON:0003528;1.68e-08;34!UBERON:0002020;1.68e-08;34!UBERON:0002780;2.72e-08;41!UBERON:0001890;2.72e-08;41!UBERON:0000073;7.79e-07;53!UBERON:0002616;7.79e-07;53|ontology_enrichment_uberon_v019_2=UBERON:0001950,3.98e-16,20;UBERON:0002619,2.35e-14,22;UBERON:0000073,9.26e-13,53;UBERON:0002616,9.26e-13,53;UBERON:0000956,3.20e-12,25;UBERON:0000203,3.20e-12,25;UBERON:0002780,6.22e-12,41;UBERON:0001890,6.22e-12,41;UBERON:0003080,6.22e-12,41;UBERON:0006240,6.22e-12,41;UBERON:0001049,9.81e-12,56;UBERON:0005068,9.81e-12,56;UBERON:0006241,9.81e-12,56;UBERON:0007135,9.81e-12,56;UBERON:0001869,1.33e-11,32;UBERON:0001893,1.12e-10,34;UBERON:0000955,2.31e-10,68;UBERON:0006238,2.31e-10,68;UBERON:0007023,2.57e-10,114;UBERON:0002791,4.59e-10,32;UBERON:0003528,2.99e-09,34;UBERON:0002020,2.99e-09,34;UBERON:0002021,1.53e-08,5;UBERON:0001017,1.10e-07,81;UBERON:0001016,1.20e-07,89;UBERON:0003075,7.35e-07,82;UBERON:0007284,7.35e-07,82|phase1_expression=0.54503513781167,0.428201047781966,1.83240725324762,1.0007329835313,0.893922188854576,0,2.53299878168311,0,1.04474251279935,0.245733936501509,0,0.218441372130172,0,0.123766352960047,1.32558950291166,0,0,0.730310090387373,0,0,0,0,0.286235987131057,0.821246550437305,0.251085279189606,0.534893840235659,0.492603536699674,0.472264687882075,0,0,0.309632246632152,0,0,0,0.619737604642413,0.853015394924529,0.587200878669695,1.10799081706375,0.601633342410425,0.868043482863407,1.11957737119962,0,0.515151135268373,0.872389432677388,0.755751887377619,0.242584061187816,0.464858073811369,0.411167888021826,0.929119112685311,0.28769239232215,0.512321413058201,0.47296445977717,1.03423704220986,1.29096936716765,0,0.376484679085209,0.818718450173537,1.12361742222542,0.306083892370903,0.320929027076094,0.639337125799041,0.989553900560148,0.398927315243264,0.426224750532694,0.580418477257168,0,0,1.25624332628372,0,0.434377689410233,0,1.10483290796269,0.632924774881769,0.422510572623884,0.212604299965044,0.628975936525128,0.22465726229299,0.600707571366025,0.803627933485401,1.14005097496499,0.79566670879636,0.365328307529268,1.75996244461323,1.63841583378639,2.66852776159066,2.56038133539904,2.40237592221607,0,2.64417949113945,0,2.27685187643779,1.17447437874188,0.764546456250458,0,0,0.526768169550154,1.180258620683,0,0.616804496998528,0.501559486172034,0.977766799900771,0.473447805734733,1.94826728407911,0.557052284425868,0,0.443067789167242,0.812411591295047,0.128091319725675,0.650296737799391,0.493313713811028,1.10540007114339,0.289803085735052,0.889719378972363,1.33770414044857,0,1.24640276967323,1.14966148080576,0.34362744548263,0.506039384039006,2.22995790026868,2.60433381542567,0,1.20460095262218,1.15187950038977,2.49861453104692,0.947109008176067,1.64225599384209,0.201606743224732,0.267440195783507,1.15859523106239,0,0.670700859703636,0.511450247374121,0,0.50133791063589,0.724232594804119,0,0,0.378139268656271,0.443458794925128,0.263504357079378,0.130979075497713,0,0,0.324547393654683,0.348259474598534,0.26591592103773,1.90792499444274,0,1.48583000531826,0.198762407366705,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9194 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10928 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-57bp_to_ENST00000552432,uc001sqs.2,uc001sqt.2_5end | |||
|description=CAGE_peak_4_at_SLC16A7_5end | |||
|id=chr12:59989773..59989790,+ | |||
|ontology_enrichment_celltype=CL:0002087!3.60e-13!119;CL:0002031!1.94e-11!124;CL:0000738!1.10e-09!140;CL:0000838!1.27e-09!52;CL:0000542!4.49e-09!53;CL:0000051!4.49e-09!53 | |||
|ontology_enrichment_celltype_v019=CL:0000236;2.67e-10;13!CL:0000625;2.37e-07;11!CL:0000542;3.46e-07;53!CL:0000945;3.64e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,3.16e-11,52;CL:0000542,6.70e-11,53;CL:0000051,6.70e-11,53;CL:0000236,6.68e-10,14;CL:0002087,1.27e-07,115;CL:0000945,2.17e-07,24;CL:0000826,2.17e-07,24;CL:0000625,2.28e-07,11;CL:0002031,5.54e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000051;3.46e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.32e-13!115;UBERON:0001869!3.04e-10!32;UBERON:0001893!5.18e-10!34;UBERON:0002780!5.91e-10!41;UBERON:0001890!5.91e-10!41;UBERON:0006240!5.91e-10!41;UBERON:0002020!8.28e-10!34;UBERON:0003528!8.28e-10!34;UBERON:0002791!1.75e-09!33;UBERON:0002616!2.04e-09!59;UBERON:0003080!2.59e-09!42;UBERON:0002619!2.71e-09!22;UBERON:0001049!2.81e-09!57;UBERON:0005068!2.81e-09!57;UBERON:0006241!2.81e-09!57;UBERON:0007135!2.81e-09!57;UBERON:0001950!3.77e-09!20;UBERON:0000956!5.22e-09!25;UBERON:0000203!5.22e-09!25;UBERON:0002390!4.01e-08!102;UBERON:0003061!4.01e-08!102;UBERON:0000955!2.92e-07!69;UBERON:0006238!2.92e-07!69;UBERON:0001017!6.57e-07!82;UBERON:0002193!6.77e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.17e-15;20!UBERON:0002619;6.20e-14;22!UBERON:0000956;7.41e-12;25!UBERON:0000203;7.41e-12;25!UBERON:0001869;9.04e-11;32!UBERON:0001893;9.83e-10;34!UBERON:0002791;2.68e-09;32!UBERON:0002021;9.15e-09;5!UBERON:0003528;1.68e-08;34!UBERON:0002020;1.68e-08;34!UBERON:0002780;2.72e-08;41!UBERON:0001890;2.72e-08;41!UBERON:0000073;7.79e-07;53!UBERON:0002616;7.79e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,3.98e-16,20;UBERON:0002619,2.35e-14,22;UBERON:0000073,9.26e-13,53;UBERON:0002616,9.26e-13,53;UBERON:0000956,3.20e-12,25;UBERON:0000203,3.20e-12,25;UBERON:0002780,6.22e-12,41;UBERON:0001890,6.22e-12,41;UBERON:0003080,6.22e-12,41;UBERON:0006240,6.22e-12,41;UBERON:0001049,9.81e-12,56;UBERON:0005068,9.81e-12,56;UBERON:0006241,9.81e-12,56;UBERON:0007135,9.81e-12,56;UBERON:0001869,1.33e-11,32;UBERON:0001893,1.12e-10,34;UBERON:0000955,2.31e-10,68;UBERON:0006238,2.31e-10,68;UBERON:0007023,2.57e-10,114;UBERON:0002791,4.59e-10,32;UBERON:0003528,2.99e-09,34;UBERON:0002020,2.99e-09,34;UBERON:0002021,1.53e-08,5;UBERON:0001017,1.10e-07,81;UBERON:0001016,1.20e-07,89;UBERON:0003075,7.35e-07,82;UBERON:0007284,7.35e-07,82 | |||
|phase1_expression=0.54503513781167,0.428201047781966,1.83240725324762,1.0007329835313,0.893922188854576,0,2.53299878168311,0,1.04474251279935,0.245733936501509,0,0.218441372130172,0,0.123766352960047,1.32558950291166,0,0,0.730310090387373,0,0,0,0,0.286235987131057,0.821246550437305,0.251085279189606,0.534893840235659,0.492603536699674,0.472264687882075,0,0,0.309632246632152,0,0,0,0.619737604642413,0.853015394924529,0.587200878669695,1.10799081706375,0.601633342410425,0.868043482863407,1.11957737119962,0,0.515151135268373,0.872389432677388,0.755751887377619,0.242584061187816,0.464858073811369,0.411167888021826,0.929119112685311,0.28769239232215,0.512321413058201,0.47296445977717,1.03423704220986,1.29096936716765,0,0.376484679085209,0.818718450173537,1.12361742222542,0.306083892370903,0.320929027076094,0.639337125799041,0.989553900560148,0.398927315243264,0.426224750532694,0.580418477257168,0,0,1.25624332628372,0,0.434377689410233,0,1.10483290796269,0.632924774881769,0.422510572623884,0.212604299965044,0.628975936525128,0.22465726229299,0.600707571366025,0.803627933485401,1.14005097496499,0.79566670879636,0.365328307529268,1.75996244461323,1.63841583378639,2.66852776159066,2.56038133539904,2.40237592221607,0,2.64417949113945,0,2.27685187643779,1.17447437874188,0.764546456250458,0,0,0.526768169550154,1.180258620683,0,0.616804496998528,0.501559486172034,0.977766799900771,0.473447805734733,1.94826728407911,0.557052284425868,0,0.443067789167242,0.812411591295047,0.128091319725675,0.650296737799391,0.493313713811028,1.10540007114339,0.289803085735052,0.889719378972363,1.33770414044857,0,1.24640276967323,1.14966148080576,0.34362744548263,0.506039384039006,2.22995790026868,2.60433381542567,0,1.20460095262218,1.15187950038977,2.49861453104692,0.947109008176067,1.64225599384209,0.201606743224732,0.267440195783507,1.15859523106239,0,0.670700859703636,0.511450247374121,0,0.50133791063589,0.724232594804119,0,0,0.378139268656271,0.443458794925128,0.263504357079378,0.130979075497713,0,0,0.324547393654683,0.348259474598534,0.26591592103773,1.90792499444274,0,1.48583000531826,0.198762407366705,0,0,0,0,0,0,0,0.35576626268671,0.33472061276467,0,0,0.24406205754817,0.735326160691737,0,0.446498641420399,0,0.337834441449967,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0.926864265692532,1.43418310374407,0.354668382198357,0,1.06748995729705,0,0.933633106199299,0.134710672069688,0.163461903113459,0.151357427644931,0.576175924479999,0.234321431833797,0,0,0.448346041655403,0.352303495931295,0.485618833104395,0,1.02077085627447,0,0.826606249406124,0,0.247266929278557,0,0,0.336672227908132,0,0.277064115484183,0,0.612975591598039,0.45071417671979,0.113432183160021,0.538168907066586,0.640672166455702,1.05965950579781,0.600182192168805,0.721367704669072,0.515281080091258,0.37223371266318,1.18143432568886,0.292311015483596,1.00973509697646,0.184099797284599,0.161646056818812,0.710019185033229,0.403008392910561,1.01736355386293,0,0,0,0.243947412259191,0.265059536642971,0.232387885739037,0.310983165046111,0.252320850875628,0,0,0.643240938192885,0,0,1.44375896333917,0.709840800239063,0.168584690078102,0.241011029883482,1.21323370005633,1.08939722046203,0.237270619111097,0.539325232640658,0.588664395376038,1.15424147083917,0.738155454624648,0,0,0,0,0.982827216677626,0,2.20731549707325,0.368965315629341,0.171567810298526,0.109750285408626,0,0,0.370353780634118,0.651616610620649,0,0,0,0.939269553886573,0.433099343283221,0,0,0,0.858486162094873,0.492434012174795,0,0,0,0.16798212819886,0,0.0895585227028483,0,0,0,0,0.414656231081544,0.576479813667846,0.37872730027914,0.444485260045183,0,0,0,0.411309970813294,0,0.571652865261156,0.112131084345361,0.87192013766656,0,0.517086863031111,0,0,0.797814349754612,0,0.257207374262142,0,0.266422179016099,0.57191197463259,0,0.823240336780769,0.325736184293735,0.355391948742546,0.791951872933429,0.602878754119172,0.871533458600294,0.199945982364114,0,2.00902836572851,2.10833939483032,0.958499421966331,0,0,1.01346914667305,0.410952645100767,0,0.560425719967636,0.591092280605782,0.431255149719035,0.385029108839245,0.508189248444927,0,0,0.670065061337395,0.637938751653163,0,0,0,0.24538298343828,0,0.813795071099207,0.207970861530807,1.07057393278297,0.473107245101804,0.702848489956279,0.300946099727719,0,0,0,0.184369168541703,0.347534457872331,0,0.343143423810856,0.413536052245775,0.647142602455851,0.853820462427555,0,0,0,0.744323423456331,0.61384789315225,0.280660094433074,0.256278298511402,0.511707249066704,0.321707842287215,1.48418066444991,0.154209693802656,0.710246901252508,0.410635780069046,0,0.232420756919918,0.120859449591622,0,0.0920809889358963,0.114814448164607,0.182091168006717,0.393373244878272,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0.219259876645935,0,0.512900250232778,0,0,0.412164046590889,0.640986253728404,0.742585499285292,0.574265537996172,0,1.6068392984416,0.290012154876366,0.154048617114644,0.460511024178389,0,0.644521469209642,1.16013355131383,0.340906509664404,0.0890320356467374,0,0,0,0.3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| |||
|short_description=p4@SLC16A7 | |||
}} |
Revision as of 23:47, 10 September 2013
Short description: | p4@SLC16A7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_SLC16A7_5end |
Coexpression cluster: | NA |
Association with transcript: | -57bp_to_ENST00000552432, uc001sqs.2, uc001sqt.2_5end |
EntrezGene: | SLC16A7 |
HGNC: | 10928 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 3.16e-11 | 52 |
lymphocyte | 6.70e-11 | 53 |
common lymphoid progenitor | 6.70e-11 | 53 |
B cell | 6.68e-10 | 14 |
nongranular leukocyte | 1.27e-07 | 115 |
lymphocyte of B lineage | 2.17e-07 | 24 |
pro-B cell | 2.17e-07 | 24 |
CD8-positive, alpha-beta T cell | 2.28e-07 | 11 |
hematopoietic lineage restricted progenitor cell | 5.54e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
neocortex | 3.98e-16 | 20 |
regional part of cerebral cortex | 2.35e-14 | 22 |
regional part of nervous system | 9.26e-13 | 53 |
regional part of brain | 9.26e-13 | 53 |
cerebral cortex | 3.20e-12 | 25 |
pallium | 3.20e-12 | 25 |
regional part of forebrain | 6.22e-12 | 41 |
forebrain | 6.22e-12 | 41 |
anterior neural tube | 6.22e-12 | 41 |
future forebrain | 6.22e-12 | 41 |
neural tube | 9.81e-12 | 56 |
neural rod | 9.81e-12 | 56 |
future spinal cord | 9.81e-12 | 56 |
neural keel | 9.81e-12 | 56 |
cerebral hemisphere | 1.33e-11 | 32 |
telencephalon | 1.12e-10 | 34 |
brain | 2.31e-10 | 68 |
future brain | 2.31e-10 | 68 |
adult organism | 2.57e-10 | 114 |
regional part of telencephalon | 4.59e-10 | 32 |
brain grey matter | 2.99e-09 | 34 |
gray matter | 2.99e-09 | 34 |
occipital lobe | 1.53e-08 | 5 |
central nervous system | 1.10e-07 | 81 |
nervous system | 1.20e-07 | 89 |
neural plate | 7.35e-07 | 82 |
presumptive neural plate | 7.35e-07 | 82 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.