FFCP PHASE1:Hg19::chr14:104698100..104698116,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C24|description=CAGE_peak_at_chr14:104698100..104698116,+|id=chr14:104698100..104698116,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000333;1.09e-32;5!CL:0002321;2.22e-11;15|ontology_enrichment_celltype_v019_2=CL:0000333,1.46e-10,41;CL:0000133,1.86e-07,59|ontology_enrichment_development_v019=UBERON:0006238;1.44e-07;10!UBERON:0003056;2.05e-07;3|ontology_enrichment_disease=DOID:169!7.01e-08!6;DOID:171!5.30e-07!10|ontology_enrichment_disease_v019=DOID:169;2.21e-27;6!DOID:5409;6.77e-19;4!DOID:171;9.81e-17;10!DOID:1325;3.14e-11;7!DOID:3904;3.14e-11;7!DOID:3905;6.11e-09;9!DOID:3095;6.01e-08;22!DOID:2994;6.01e-08;22!DOID:3093;5.23e-07;11|ontology_enrichment_disease_v019_2=DOID:169,2.54e-27,6;DOID:5409,6.77e-19,4;DOID:171,1.06e-16,10;DOID:1325,3.14e-11,7;DOID:3904,3.14e-11,7;DOID:3905,6.11e-09,9;DOID:3095,6.23e-08,22;DOID:2994,6.23e-08,22;DOID:3093,5.00e-07,11|ontology_enrichment_uberon=UBERON:0000073!4.37e-17!94;UBERON:0001016!4.37e-17!94;UBERON:0002346!1.84e-15!90;UBERON:0003075!4.85e-15!86;UBERON:0007284!4.85e-15!86;UBERON:0005743!1.01e-13!86;UBERON:0001049!3.38e-13!57;UBERON:0005068!3.38e-13!57;UBERON:0006241!3.38e-13!57;UBERON:0007135!3.38e-13!57;UBERON:0001017!4.79e-12!82;UBERON:0003056!5.37e-12!61;UBERON:0007023!2.03e-11!115;UBERON:0000955!2.86e-11!69;UBERON:0006238!2.86e-11!69;UBERON:0002616!3.66e-11!59;UBERON:0002780!1.48e-10!41;UBERON:0001890!1.48e-10!41;UBERON:0006240!1.48e-10!41;UBERON:0003080!3.15e-10!42;UBERON:0002020!8.71e-10!34;UBERON:0003528!8.71e-10!34;UBERON:0000924!1.57e-09!173;UBERON:0006601!1.57e-09!173;UBERON:0000013!1.78e-09!5;UBERON:0002410!1.78e-09!5;UBERON:0000988!3.15e-09!3;UBERON:0004121!4.10e-09!169;UBERON:0001869!1.15e-08!32;UBERON:0001893!5.05e-08!34;UBERON:0002619!1.30e-07!22;UBERON:0001905!3.17e-07!2;UBERON:0002757!3.17e-07!2;UBERON:0010134!3.17e-07!2;UBERON:0002784!3.17e-07!2;UBERON:0005408!3.17e-07!2;UBERON:0001899!3.17e-07!2;UBERON:0003296!3.43e-07!4;UBERON:0010133!3.43e-07!4;UBERON:0000153!4.68e-07!129;UBERON:0007811!4.68e-07!129;UBERON:0002791!5.64e-07!33;UBERON:0000033!5.90e-07!123;UBERON:0002148!8.60e-07!2;UBERON:0009662!8.60e-07!2|ontology_enrichment_uberon_v019=UBERON:0001905;1.30e-37;2!UBERON:0002757;1.30e-37;2!UBERON:0010134;1.30e-37;2!UBERON:0005408;1.30e-37;2!UBERON:0001899;1.30e-37;2!UBERON:0000013;1.09e-32;5!UBERON:0002410;1.09e-32;5!UBERON:0003296;2.26e-19;4!UBERON:0010133;2.26e-19;4!UBERON:0002784;2.26e-19;4!UBERON:0000010;1.63e-18;8!UBERON:0001894;1.68e-11;7|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.30e-37,2;UBERON:0002757,1.30e-37,2;UBERON:0010134,1.30e-37,2;UBERON:0005408,1.30e-37,2;UBERON:0001899,1.30e-37,2;UBERON:0000013,1.28e-32,5;UBERON:0002410,1.28e-32,5;UBERON:0003296,2.26e-19,4;UBERON:0010133,2.26e-19,4;UBERON:0002784,2.26e-19,4;UBERON:0000010,1.79e-18,8;UBERON:0001016,3.88e-12,89;UBERON:0001894,1.68e-11,7;UBERON:0006222,1.68e-11,7;UBERON:0011216,2.80e-07,223|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190493682876507,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.445773537109913,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0.291604613383254,0,0,0.361789315876224,0,0,0,0,0.32681539055697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0,0,0,0,0,0,0,0,0,0,0,2.41981432097328,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.0633107959558787,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0,0.0524545881349981,0,0.179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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_at_chr14:104698100..104698116,+ | |||
|id=chr14:104698100..104698116,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;1.09e-32;5!CL:0002321;2.22e-11;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,1.46e-10,41;CL:0000133,1.86e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0006238;1.44e-07;10!UBERON:0003056;2.05e-07;3 | |||
|ontology_enrichment_disease=DOID:169!7.01e-08!6;DOID:171!5.30e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:169;2.21e-27;6!DOID:5409;6.77e-19;4!DOID:171;9.81e-17;10!DOID:1325;3.14e-11;7!DOID:3904;3.14e-11;7!DOID:3905;6.11e-09;9!DOID:3095;6.01e-08;22!DOID:2994;6.01e-08;22!DOID:3093;5.23e-07;11 | |||
|ontology_enrichment_disease_v019_2=DOID:169,2.54e-27,6;DOID:5409,6.77e-19,4;DOID:171,1.06e-16,10;DOID:1325,3.14e-11,7;DOID:3904,3.14e-11,7;DOID:3905,6.11e-09,9;DOID:3095,6.23e-08,22;DOID:2994,6.23e-08,22;DOID:3093,5.00e-07,11 | |||
|ontology_enrichment_uberon=UBERON:0000073!4.37e-17!94;UBERON:0001016!4.37e-17!94;UBERON:0002346!1.84e-15!90;UBERON:0003075!4.85e-15!86;UBERON:0007284!4.85e-15!86;UBERON:0005743!1.01e-13!86;UBERON:0001049!3.38e-13!57;UBERON:0005068!3.38e-13!57;UBERON:0006241!3.38e-13!57;UBERON:0007135!3.38e-13!57;UBERON:0001017!4.79e-12!82;UBERON:0003056!5.37e-12!61;UBERON:0007023!2.03e-11!115;UBERON:0000955!2.86e-11!69;UBERON:0006238!2.86e-11!69;UBERON:0002616!3.66e-11!59;UBERON:0002780!1.48e-10!41;UBERON:0001890!1.48e-10!41;UBERON:0006240!1.48e-10!41;UBERON:0003080!3.15e-10!42;UBERON:0002020!8.71e-10!34;UBERON:0003528!8.71e-10!34;UBERON:0000924!1.57e-09!173;UBERON:0006601!1.57e-09!173;UBERON:0000013!1.78e-09!5;UBERON:0002410!1.78e-09!5;UBERON:0000988!3.15e-09!3;UBERON:0004121!4.10e-09!169;UBERON:0001869!1.15e-08!32;UBERON:0001893!5.05e-08!34;UBERON:0002619!1.30e-07!22;UBERON:0001905!3.17e-07!2;UBERON:0002757!3.17e-07!2;UBERON:0010134!3.17e-07!2;UBERON:0002784!3.17e-07!2;UBERON:0005408!3.17e-07!2;UBERON:0001899!3.17e-07!2;UBERON:0003296!3.43e-07!4;UBERON:0010133!3.43e-07!4;UBERON:0000153!4.68e-07!129;UBERON:0007811!4.68e-07!129;UBERON:0002791!5.64e-07!33;UBERON:0000033!5.90e-07!123;UBERON:0002148!8.60e-07!2;UBERON:0009662!8.60e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.30e-37;2!UBERON:0002757;1.30e-37;2!UBERON:0010134;1.30e-37;2!UBERON:0005408;1.30e-37;2!UBERON:0001899;1.30e-37;2!UBERON:0000013;1.09e-32;5!UBERON:0002410;1.09e-32;5!UBERON:0003296;2.26e-19;4!UBERON:0010133;2.26e-19;4!UBERON:0002784;2.26e-19;4!UBERON:0000010;1.63e-18;8!UBERON:0001894;1.68e-11;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.30e-37,2;UBERON:0002757,1.30e-37,2;UBERON:0010134,1.30e-37,2;UBERON:0005408,1.30e-37,2;UBERON:0001899,1.30e-37,2;UBERON:0000013,1.28e-32,5;UBERON:0002410,1.28e-32,5;UBERON:0003296,2.26e-19,4;UBERON:0010133,2.26e-19,4;UBERON:0002784,2.26e-19,4;UBERON:0000010,1.79e-18,8;UBERON:0001016,3.88e-12,89;UBERON:0001894,1.68e-11,7;UBERON:0006222,1.68e-11,7;UBERON:0011216,2.80e-07,223 | |||
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|short_description=p@chr14:104698100..104698116,+ | |||
}} |
Revision as of 03:27, 11 September 2013
Short description: | p@chr14:104698100..104698116, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:104698100..104698116, + |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 1.46e-10 | 41 |
neurectodermal cell | 1.86e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
pineal body | 1.30e-37 | 2 |
regional part of epithalamus | 1.30e-37 | 2 |
secretory circumventricular organ | 1.30e-37 | 2 |
circumventricular organ | 1.30e-37 | 2 |
epithalamus | 1.30e-37 | 2 |
sympathetic nervous system | 1.28e-32 | 5 |
autonomic nervous system | 1.28e-32 | 5 |
gland of diencephalon | 2.26e-19 | 4 |
neuroendocrine gland | 2.26e-19 | 4 |
regional part of diencephalon | 2.26e-19 | 4 |
peripheral nervous system | 1.79e-18 | 8 |
nervous system | 3.88e-12 | 89 |
diencephalon | 1.68e-11 | 7 |
future diencephalon | 1.68e-11 | 7 |
organ system subdivision | 2.80e-07 | 223 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 2.54e-27 | 6 |
lung small cell carcinoma | 6.77e-19 | 4 |
neuroectodermal tumor | 1.06e-16 | 10 |
bronchus cancer | 3.14e-11 | 7 |
bronchogenic carcinoma | 3.14e-11 | 7 |
lung carcinoma | 6.11e-09 | 9 |
germ cell and embryonal cancer | 6.23e-08 | 22 |
germ cell cancer | 6.23e-08 | 22 |
nervous system cancer | 5.00e-07 | 11 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.