FFCP PHASE1:Hg19::chr14:61447832..61447878,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=145389|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=19863|TSSclassifier=S|UniProt=Q8IZM9|association_with_transcript=0bp_to_ENST00000354886,NM_001172702,NM_153811_5end|description=CAGE_peak_2_at_SLC38A6_5end|id=chr14:61447832..61447878,+|ontology_enrichment_celltype=CL:0002087!5.77e-36!119;CL:0002031!1.17e-34!124;CL:0000738!6.59e-32!140;CL:0000037!5.47e-28!172;CL:0000566!5.47e-28!172;CL:0000988!4.65e-26!182;CL:0002032!6.47e-25!165;CL:0000837!6.47e-25!165;CL:0002057!4.00e-24!42;CL:0000860!1.19e-20!45;CL:0000839!3.33e-20!70;CL:0000557!4.92e-19!71;CL:0002194!5.70e-19!63;CL:0000576!5.70e-19!63;CL:0000040!5.70e-19!63;CL:0000559!5.70e-19!63;CL:0002009!4.82e-18!65;CL:0000766!7.47e-17!76;CL:0000542!4.08e-15!53;CL:0000051!4.08e-15!53;CL:0000838!7.48e-15!52;CL:0000763!5.18e-11!112;CL:0000049!5.18e-11!112;CL:0000791!7.93e-11!18;CL:0000789!7.93e-11!18;CL:0002420!7.93e-11!18;CL:0002419!7.93e-11!18;CL:0000790!7.93e-11!18;CL:0000084!1.01e-09!25;CL:0000827!1.01e-09!25;CL:0000625!1.25e-07!11;CL:0002320!9.54e-07!365|ontology_enrichment_celltype_v019=CL:0000860;2.23e-18;33!CL:0002057;2.23e-18;33!CL:0000473;1.04e-16;39!CL:0000234;1.04e-16;39!CL:0000576;5.00e-16;48!CL:0002087;4.30e-12;104!CL:0000766;2.76e-11;69!CL:0000791;3.24e-11;18!CL:0000789;3.24e-11;18!CL:0002419;3.24e-11;18!CL:0000084;1.03e-09;25!CL:0000542;2.82e-09;53!CL:0000738;5.74e-08;136!CL:0000625;7.58e-08;11|ontology_enrichment_celltype_v019_2=CL:0002087,1.05e-39,115;CL:0002031,3.28e-38,120;CL:0000738,3.07e-35,136;CL:0000037,9.35e-31,168;CL:0000988,1.29e-28,177;CL:0002032,1.54e-27,161;CL:0000837,1.54e-27,161;CL:0000473,2.48e-25,48;CL:0000234,2.48e-25,48;CL:0000860,2.74e-24,42;CL:0002057,2.74e-24,42;CL:0000839,6.46e-24,66;CL:0002194,8.71e-23,59;CL:0000576,8.71e-23,59;CL:0000040,8.71e-23,59;CL:0000559,8.71e-23,59;CL:0000557,1.46e-22,67;CL:0002009,1.19e-21,61;CL:0000766,3.76e-20,72;CL:0000542,4.60e-15,53;CL:0000051,4.60e-15,53;CL:0000838,8.48e-15,52;CL:0000763,5.07e-13,108;CL:0000049,5.07e-13,108;CL:0000791,6.79e-11,18;CL:0000789,6.79e-11,18;CL:0002420,6.79e-11,18;CL:0002419,6.79e-11,18;CL:0000790,6.79e-11,18;CL:0000084,8.82e-10,25;CL:0000827,8.82e-10,25;CL:0000625,1.12e-07,11;CL:0002320,1.69e-07,361;CL:0000134,3.83e-07,354|ontology_enrichment_development_v019=CL:0002057;3.03e-18;42!CL:0000790;3.24e-11;18!CL:0000051;2.82e-09;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.44e-20!102;UBERON:0003061!1.44e-20!102;UBERON:0002193!2.07e-20!112;UBERON:0002371!6.13e-17!80;UBERON:0001474!2.48e-15!86;UBERON:0002405!2.43e-11!115;UBERON:0004765!7.16e-11!101;UBERON:0001434!7.16e-11!101;UBERON:0007023!4.45e-07!115|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.08e-23,98;UBERON:0003061,1.08e-23,98;UBERON:0002193,1.84e-23,108;UBERON:0002405,2.84e-21,93;UBERON:0002371,3.46e-20,76;UBERON:0001474,3.10e-18,82;UBERON:0004765,1.51e-16,90;UBERON:0001434,6.88e-13,100;UBERON:0002384,4.49e-07,371;UBERON:0007023,7.34e-07,114|phase1_expression=2.36181893051724,1.49870366723688,2.81908808191942,0,3.12872766099101,0.872338524100369,2.53299878168311,0.631719873426831,1.56711376919903,0.491467873003018,1.39560233594486,0.873765488520689,0.263766978228454,3.58922423584135,2.31978163009541,2.6893005858071,1.20538905604795,2.92124036154949,1.46379839637152,2.58554221961255,2.65200898617529,2.82109249330279,1.71741592278634,1.23186982565596,2.00868223351684,1.98674854944673,1.72411237844886,2.44003422072406,7.86728553697808,8.44424675813868,7.58599004248772,0.919421224478927,0.30120591877825,0.739508020333575,6.42977764816504,6.11327699695913,6.16560922603179,19.3898392986157,14.0381113229099,12.3696196308036,9.85228086655667,7.44955431843653,7.98484259665978,8.72389432677388,7.55751887377619,5.82201746850759,15.8051745095866,18.0913870729603,20.7503268499719,11.507695692886,13.0641960329841,16.553756092201,28.2691458204027,23.8829332926016,28.4395621848118,10.9180556934711,11.4620583024295,15.2811969422658,10.7129362329816,10.5906578935111,14.7047538933779,6.26717470354761,6.98122801675712,7.6720455095885,12.7692064996577,16.4541715160431,11.8336227309159,17.0849092374585,20.8593167368081,19.3298071787554,8.47559303686716,24.6746016111668,18.9877432464531,5.91514801673437,9.35458919846192,6.0801007197429,4.38081661471331,5.70672192797724,6.42902346788321,8.55038231223746,10.1447505371536,11.1425133796427,15.839662001519,10.3766336139805,8.89509253863555,10.6682555641627,11.6114836240444,10.3455439191807,9.91567309177293,10.494591299889,5.69212969109448,8.22132065119314,5.73409842187843,10.5737062863221,12.3311883855938,6.05783394982677,14.7532327585375,12.9693551707224,5.55124047298675,11.7030546773475,12.71096839871,18.9379122293893,27.2757419771076,7.79873198196215,14.435689466267,16.6150420937716,17.060643417196,8.06975314271754,8.9740949816316,4.60426132890293,6.35605040907451,9.56350182925673,14.2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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=145389 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19863 | |||
|TSSclassifier=S | |||
|UniProt=Q8IZM9 | |||
|association_with_transcript=0bp_to_ENST00000354886,NM_001172702,NM_153811_5end | |||
|description=CAGE_peak_2_at_SLC38A6_5end | |||
|id=chr14:61447832..61447878,+ | |||
|ontology_enrichment_celltype=CL:0002087!5.77e-36!119;CL:0002031!1.17e-34!124;CL:0000738!6.59e-32!140;CL:0000037!5.47e-28!172;CL:0000566!5.47e-28!172;CL:0000988!4.65e-26!182;CL:0002032!6.47e-25!165;CL:0000837!6.47e-25!165;CL:0002057!4.00e-24!42;CL:0000860!1.19e-20!45;CL:0000839!3.33e-20!70;CL:0000557!4.92e-19!71;CL:0002194!5.70e-19!63;CL:0000576!5.70e-19!63;CL:0000040!5.70e-19!63;CL:0000559!5.70e-19!63;CL:0002009!4.82e-18!65;CL:0000766!7.47e-17!76;CL:0000542!4.08e-15!53;CL:0000051!4.08e-15!53;CL:0000838!7.48e-15!52;CL:0000763!5.18e-11!112;CL:0000049!5.18e-11!112;CL:0000791!7.93e-11!18;CL:0000789!7.93e-11!18;CL:0002420!7.93e-11!18;CL:0002419!7.93e-11!18;CL:0000790!7.93e-11!18;CL:0000084!1.01e-09!25;CL:0000827!1.01e-09!25;CL:0000625!1.25e-07!11;CL:0002320!9.54e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.23e-18;33!CL:0002057;2.23e-18;33!CL:0000473;1.04e-16;39!CL:0000234;1.04e-16;39!CL:0000576;5.00e-16;48!CL:0002087;4.30e-12;104!CL:0000766;2.76e-11;69!CL:0000791;3.24e-11;18!CL:0000789;3.24e-11;18!CL:0002419;3.24e-11;18!CL:0000084;1.03e-09;25!CL:0000542;2.82e-09;53!CL:0000738;5.74e-08;136!CL:0000625;7.58e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,1.05e-39,115;CL:0002031,3.28e-38,120;CL:0000738,3.07e-35,136;CL:0000037,9.35e-31,168;CL:0000988,1.29e-28,177;CL:0002032,1.54e-27,161;CL:0000837,1.54e-27,161;CL:0000473,2.48e-25,48;CL:0000234,2.48e-25,48;CL:0000860,2.74e-24,42;CL:0002057,2.74e-24,42;CL:0000839,6.46e-24,66;CL:0002194,8.71e-23,59;CL:0000576,8.71e-23,59;CL:0000040,8.71e-23,59;CL:0000559,8.71e-23,59;CL:0000557,1.46e-22,67;CL:0002009,1.19e-21,61;CL:0000766,3.76e-20,72;CL:0000542,4.60e-15,53;CL:0000051,4.60e-15,53;CL:0000838,8.48e-15,52;CL:0000763,5.07e-13,108;CL:0000049,5.07e-13,108;CL:0000791,6.79e-11,18;CL:0000789,6.79e-11,18;CL:0002420,6.79e-11,18;CL:0002419,6.79e-11,18;CL:0000790,6.79e-11,18;CL:0000084,8.82e-10,25;CL:0000827,8.82e-10,25;CL:0000625,1.12e-07,11;CL:0002320,1.69e-07,361;CL:0000134,3.83e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;3.03e-18;42!CL:0000790;3.24e-11;18!CL:0000051;2.82e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.44e-20!102;UBERON:0003061!1.44e-20!102;UBERON:0002193!2.07e-20!112;UBERON:0002371!6.13e-17!80;UBERON:0001474!2.48e-15!86;UBERON:0002405!2.43e-11!115;UBERON:0004765!7.16e-11!101;UBERON:0001434!7.16e-11!101;UBERON:0007023!4.45e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.08e-23,98;UBERON:0003061,1.08e-23,98;UBERON:0002193,1.84e-23,108;UBERON:0002405,2.84e-21,93;UBERON:0002371,3.46e-20,76;UBERON:0001474,3.10e-18,82;UBERON:0004765,1.51e-16,90;UBERON:0001434,6.88e-13,100;UBERON:0002384,4.49e-07,371;UBERON:0007023,7.34e-07,114 | |||
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| |||
|short_description=p2@SLC38A6 | |||
}} |
Revision as of 04:59, 11 September 2013
Short description: | p2@SLC38A6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_SLC38A6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000354886, NM_001172702, NM_153811_5end |
EntrezGene: | SLC38A6 |
HGNC: | 19863 |
UniProt: | Q8IZM9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.08e-23 | 98 |
blood island | 1.08e-23 | 98 |
hemolymphoid system | 1.84e-23 | 108 |
immune system | 2.84e-21 | 93 |
bone marrow | 3.46e-20 | 76 |
bone element | 3.10e-18 | 82 |
skeletal element | 1.51e-16 | 90 |
skeletal system | 6.88e-13 | 100 |
connective tissue | 4.49e-07 | 371 |
adult organism | 7.34e-07 | 114 |
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