FFCP PHASE1:Hg19::chr16:31470143..31470177,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=79798|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25781|TSSclassifier=S|UniProt=F5H156|association_with_transcript=-90bp_to_ENST00000538189,uc010vfo.1_5end|coexpression_cluster_id=C6|description=CAGE_peak_3_at_ARMC5_5end|id=chr16:31470143..31470177,+|ontology_enrichment_celltype=CL:0000738!1.48e-18!140;CL:0000766!3.64e-18!76;CL:0000988!5.37e-18!182;CL:0000037!6.54e-17!172;CL:0000566!6.54e-17!172;CL:0000134!8.06e-17!358;CL:0000557!1.71e-16!71;CL:0002320!4.42e-16!365;CL:0000763!8.40e-16!112;CL:0000049!8.40e-16!112;CL:0000048!7.26e-15!430;CL:0000034!7.31e-15!444;CL:0002009!1.48e-14!65;CL:0000723!2.55e-14!436;CL:0000860!2.65e-14!45;CL:0000839!3.41e-14!70;CL:0002057!4.68e-14!42;CL:0002032!4.81e-14!165;CL:0000837!4.81e-14!165;CL:0000219!1.00e-13!390;CL:0002194!2.11e-13!63;CL:0000576!2.11e-13!63;CL:0000040!2.11e-13!63;CL:0000559!2.11e-13!63;CL:0002031!1.28e-12!124;CL:0002087!9.86e-12!119;CL:0002371!5.53e-09!591;CL:0000144!1.80e-08!625|ontology_enrichment_celltype_v019=CL:0000860;5.15e-19;33!CL:0002057;5.15e-19;33!CL:0000766;2.84e-17;69!CL:0000473;7.28e-16;39!CL:0000234;7.28e-16;39!CL:0000576;2.97e-14;48!CL:0000094;9.98e-14;8!CL:0002393;6.46e-13;6!CL:0002397;6.46e-13;6!CL:0000081;2.31e-12;11!CL:0000763;3.04e-09;100!CL:0002087;4.25e-08;104!CL:0000767;1.47e-07;3!CL:0000784;1.78e-07;3!CL:0000623;2.03e-07;3!CL:0000738;2.25e-07;136!CL:0000226;2.53e-07;3!CL:0000842;2.53e-07;3|ontology_enrichment_celltype_v019_2=CL:0000738,2.98e-37,136;CL:0000037,2.65e-35,168;CL:0000766,2.96e-35,72;CL:0000988,4.94e-34,177;CL:0000763,4.80e-30,108;CL:0000049,4.80e-30,108;CL:0000557,8.42e-30,67;CL:0002032,1.16e-28,161;CL:0000837,1.16e-28,161;CL:0000860,5.63e-28,42;CL:0002057,5.63e-28,42;CL:0000473,1.75e-27,48;CL:0000234,1.75e-27,48;CL:0002009,5.35e-25,61;CL:0000839,2.72e-24,66;CL:0002031,6.73e-24,120;CL:0002087,2.54e-22,115;CL:0002194,4.22e-22,59;CL:0000576,4.22e-22,59;CL:0000040,4.22e-22,59;CL:0000559,4.22e-22,59;CL:0000134,4.90e-18,354;CL:0002320,2.70e-17,361;CL:0000034,8.81e-16,441;CL:0000219,1.07e-14,386;CL:0000048,1.14e-14,427;CL:0000723,3.55e-14,433;CL:0000094,8.88e-14,8;CL:0000081,1.79e-12,11;CL:0002393,2.45e-08,9;CL:0002397,2.45e-08,9;CL:0000767,1.33e-07,3;CL:0000784,1.51e-07,3;CL:0000226,2.00e-07,3;CL:0000842,2.00e-07,3;CL:0000623,2.27e-07,3;CL:0000825,2.27e-07,3|ontology_enrichment_development_v019=CL:0002057;5.00e-20;42!CL:0000049;4.88e-07;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!4.81e-16!375;UBERON:0002371!1.44e-14!80;UBERON:0001474!1.47e-13!86;UBERON:0002390!1.52e-11!102;UBERON:0003061!1.52e-11!102;UBERON:0004765!1.68e-11!101;UBERON:0001434!1.68e-11!101;UBERON:0002193!1.26e-09!112;UBERON:0002405!1.15e-07!115;UBERON:0002204!1.75e-07!167;UBERON:0003081!3.88e-07!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.18e-27,76;UBERON:0002390,2.95e-24,98;UBERON:0003061,2.95e-24,98;UBERON:0001474,3.94e-24,82;UBERON:0004765,4.69e-21,90;UBERON:0002193,6.16e-21,108;UBERON:0002405,4.84e-20,93;UBERON:0001434,6.42e-18,100;UBERON:0002384,2.75e-16,371;UBERON:0003081,9.32e-14,203;UBERON:0002204,4.54e-10,167;UBERON:0000926,1.66e-07,315;UBERON:0004120,1.66e-07,315;UBERON:0006603,1.66e-07,315|phase1_expression=0.363356758541113,0,0.704772020479856,0,0.446961094427288,0,0,0,0,0,0,0,0.263766978228454,0.247532705920093,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0,0.136874425072884,0,0.534893840235659,0.0821005894499457,0.314843125254717,4.32700704533794,4.98978217526377,3.8704030829019,0.919421224478927,0.30120591877825,0,0.0774672005803016,0,4.11040615068786,38.2256831886995,38.5045339142672,29.0794566759241,0.447830948479849,0.647787332037959,0.257575567634187,0.581592955118259,0.377875943688809,0.485168122375632,1.39457422143411,1.23350366406548,1.23882548358041,0.863077176966451,0.256160706529101,0,2.41321976515633,1.29096936716765,0,1.50593871634084,0.272906150057846,2.47195832889593,1.22433556948361,2.24650318953266,1.91801137739712,0.329851300186716,0.199463657621632,0,2.03146467040009,2.26954089876456,5.60540024096017,0.75374599577023,1.5644487552606,1.73751075764093,3.02699751316684,2.57794345191295,3.48108626184973,2.11255286311942,1.91343869968539,1.25795187305026,1.90958672949042,2.10247649978109,1.44653028027372,0.285012743741249,0,0.182664153764634,0,0,0,1.70692089026603,0,0,0,0,0.569212969109448,3.52342313622563,2.6759125968766,5.28685314316103,10.0891541336676,2.10707267820062,0.983548850569165,3.53709686474248,0.616804496998528,0,0.32592226663359,0,0,0,0,0,0,0,0.130059347559878,0.164437904603676,0,0,0.14828656316206,0,0,0.113309342697566,0,0,0,0,0,0,0.301150238155546,0.127986611154418,0,0,0,2.82249440514625,2.94184215361858,1.73789284659359,2.43806866313962,0,0.12786256184353,0,0.50133791063589,0.289693037921647,0,0.973269740605272,0,0.221729397462564,0.175669571386252,0.196468613246569,1.09288586487763,0,0,0.17412973729926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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=79798 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25781 | |||
|TSSclassifier=S | |||
|UniProt=F5H156 | |||
|association_with_transcript=-90bp_to_ENST00000538189,uc010vfo.1_5end | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_3_at_ARMC5_5end | |||
|id=chr16:31470143..31470177,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.48e-18!140;CL:0000766!3.64e-18!76;CL:0000988!5.37e-18!182;CL:0000037!6.54e-17!172;CL:0000566!6.54e-17!172;CL:0000134!8.06e-17!358;CL:0000557!1.71e-16!71;CL:0002320!4.42e-16!365;CL:0000763!8.40e-16!112;CL:0000049!8.40e-16!112;CL:0000048!7.26e-15!430;CL:0000034!7.31e-15!444;CL:0002009!1.48e-14!65;CL:0000723!2.55e-14!436;CL:0000860!2.65e-14!45;CL:0000839!3.41e-14!70;CL:0002057!4.68e-14!42;CL:0002032!4.81e-14!165;CL:0000837!4.81e-14!165;CL:0000219!1.00e-13!390;CL:0002194!2.11e-13!63;CL:0000576!2.11e-13!63;CL:0000040!2.11e-13!63;CL:0000559!2.11e-13!63;CL:0002031!1.28e-12!124;CL:0002087!9.86e-12!119;CL:0002371!5.53e-09!591;CL:0000144!1.80e-08!625 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.15e-19;33!CL:0002057;5.15e-19;33!CL:0000766;2.84e-17;69!CL:0000473;7.28e-16;39!CL:0000234;7.28e-16;39!CL:0000576;2.97e-14;48!CL:0000094;9.98e-14;8!CL:0002393;6.46e-13;6!CL:0002397;6.46e-13;6!CL:0000081;2.31e-12;11!CL:0000763;3.04e-09;100!CL:0002087;4.25e-08;104!CL:0000767;1.47e-07;3!CL:0000784;1.78e-07;3!CL:0000623;2.03e-07;3!CL:0000738;2.25e-07;136!CL:0000226;2.53e-07;3!CL:0000842;2.53e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.98e-37,136;CL:0000037,2.65e-35,168;CL:0000766,2.96e-35,72;CL:0000988,4.94e-34,177;CL:0000763,4.80e-30,108;CL:0000049,4.80e-30,108;CL:0000557,8.42e-30,67;CL:0002032,1.16e-28,161;CL:0000837,1.16e-28,161;CL:0000860,5.63e-28,42;CL:0002057,5.63e-28,42;CL:0000473,1.75e-27,48;CL:0000234,1.75e-27,48;CL:0002009,5.35e-25,61;CL:0000839,2.72e-24,66;CL:0002031,6.73e-24,120;CL:0002087,2.54e-22,115;CL:0002194,4.22e-22,59;CL:0000576,4.22e-22,59;CL:0000040,4.22e-22,59;CL:0000559,4.22e-22,59;CL:0000134,4.90e-18,354;CL:0002320,2.70e-17,361;CL:0000034,8.81e-16,441;CL:0000219,1.07e-14,386;CL:0000048,1.14e-14,427;CL:0000723,3.55e-14,433;CL:0000094,8.88e-14,8;CL:0000081,1.79e-12,11;CL:0002393,2.45e-08,9;CL:0002397,2.45e-08,9;CL:0000767,1.33e-07,3;CL:0000784,1.51e-07,3;CL:0000226,2.00e-07,3;CL:0000842,2.00e-07,3;CL:0000623,2.27e-07,3;CL:0000825,2.27e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;5.00e-20;42!CL:0000049;4.88e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!4.81e-16!375;UBERON:0002371!1.44e-14!80;UBERON:0001474!1.47e-13!86;UBERON:0002390!1.52e-11!102;UBERON:0003061!1.52e-11!102;UBERON:0004765!1.68e-11!101;UBERON:0001434!1.68e-11!101;UBERON:0002193!1.26e-09!112;UBERON:0002405!1.15e-07!115;UBERON:0002204!1.75e-07!167;UBERON:0003081!3.88e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.18e-27,76;UBERON:0002390,2.95e-24,98;UBERON:0003061,2.95e-24,98;UBERON:0001474,3.94e-24,82;UBERON:0004765,4.69e-21,90;UBERON:0002193,6.16e-21,108;UBERON:0002405,4.84e-20,93;UBERON:0001434,6.42e-18,100;UBERON:0002384,2.75e-16,371;UBERON:0003081,9.32e-14,203;UBERON:0002204,4.54e-10,167;UBERON:0000926,1.66e-07,315;UBERON:0004120,1.66e-07,315;UBERON:0006603,1.66e-07,315 | |||
|phase1_expression=0.363356758541113,0,0.704772020479856,0,0.446961094427288,0,0,0,0,0,0,0,0.263766978228454,0.247532705920093,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0,0.136874425072884,0,0.534893840235659,0.0821005894499457,0.314843125254717,4.32700704533794,4.98978217526377,3.8704030829019,0.919421224478927,0.30120591877825,0,0.0774672005803016,0,4.11040615068786,38.2256831886995,38.5045339142672,29.0794566759241,0.447830948479849,0.647787332037959,0.257575567634187,0.581592955118259,0.377875943688809,0.485168122375632,1.39457422143411,1.23350366406548,1.23882548358041,0.863077176966451,0.256160706529101,0,2.41321976515633,1.29096936716765,0,1.50593871634084,0.272906150057846,2.47195832889593,1.22433556948361,2.24650318953266,1.91801137739712,0.329851300186716,0.199463657621632,0,2.03146467040009,2.26954089876456,5.60540024096017,0.75374599577023,1.5644487552606,1.73751075764093,3.02699751316684,2.57794345191295,3.48108626184973,2.11255286311942,1.91343869968539,1.25795187305026,1.90958672949042,2.10247649978109,1.44653028027372,0.285012743741249,0,0.182664153764634,0,0,0,1.70692089026603,0,0,0,0,0.569212969109448,3.52342313622563,2.6759125968766,5.28685314316103,10.0891541336676,2.10707267820062,0.983548850569165,3.53709686474248,0.616804496998528,0,0.32592226663359,0,0,0,0,0,0,0,0.130059347559878,0.164437904603676,0,0,0.14828656316206,0,0,0.113309342697566,0,0,0,0,0,0,0.301150238155546,0.127986611154418,0,0,0,2.82249440514625,2.94184215361858,1.73789284659359,2.43806866313962,0,0.12786256184353,0,0.50133791063589,0.289693037921647,0,0.973269740605272,0,0.221729397462564,0.175669571386252,0.196468613246569,1.09288586487763,0,0,0.174129737299267,0.132957960518865,4.05434061319081,5.14795419702115,2.97166001063652,0.198762407366705,0,0.347140501607594,0.56530794192401,1.25849830862972,0.825354125820202,0,0,0.35576626268671,0,0,0,0.732186172644509,0.367663080345869,0.81014194788176,0.357198913136319,0,0.337834441449967,0,0,0.366403487860815,19.7670626154095,23.2668158488995,0,0.993943903390637,0.25326102332916,0.662045904066094,0.286836620748814,0.354668382198357,0.560677600142307,0,1.48000529050296,0,0,0.163461903113459,0.151357427644931,0.576175924479999,0,1.24864030732128,0,0.149448680551801,0,0.161872944368132,0.140450806702248,0.204154171254893,0.245668634623536,0.516628905878827,0,0.741800787835671,0,0,0.505008341862199,0,0.277064115484183,0,0,0.751190294532984,0,0.89694817844431,0.213557388818567,0,0.300091096084402,0.206105058476878,0.257640540045629,0.18611685633159,0,0.292311015483596,1.00973509697646,0.184099797284599,0.161646056818812,0.355009592516614,0.302256294682921,0.169560592310488,0.193260853163297,0,0,0,0.132529768321485,0,0,0.252320850875628,0,1.56449532329816,1.92972281457866,1.38134921352481,0,0.721879481669586,0.354920400119532,0.337169380156203,0.241011029883482,0.661763836394364,0,0,0.134831308160164,0.588664395376038,0,0.738155454624648,0,0,0,0,0,0,0.441463099414651,0,0,0.329250856225877,0,0,0,0.325808305310325,1.03993478527958,1.44331342025273,0,0,0.433099343283221,0,0.190254152234598,0,0,0.246217006087397,0,0.297262324577456,0,0,0.283550194484773,0.268675568108545,0,0,0,0.44024217006613,8.29312462163088,6.77363781059719,11.3618190083742,0.063497894292169,0,0,0,0,0,0.285826432630578,0.112131084345361,0,0.22001485746285,0.258543431515556,0,0,0.531876233169741,0,0,0,0.532844358032199,0.142977993658148,0.542621605391443,0,0,0,0,1.50719688529793,0,0.199945982364114,1.2162378064119,0.502257091432126,2.10833939483032,0.718874566474748,0,0,0.434343920002738,0.410952645100767,0.358121926479791,0.112085143993527,4.53170748464433,2.15627574859517,4.10697716095195,0.508189248444927,0,0.773288812777695,0.502548796003046,0,4.49404214368309,0,5.38740167466846,0,0,0,0.207970861530807,0.178428988797162,0.473107245101804,0,0.300946099727719,0,0,1.32845119707087,0.184369168541703,0.0868836144680828,0.195801157462741,0.343143423810856,1.6541442089831,9.70713903683776,7.15074637283077,2.12189300012382,1.66435439510497,1.20956117331872,0.744323423456331,0.306923946576125,0,0.256278298511402,0,0.321707842287215,1.48418066444991,0.462629081407967,0.355123450626254,0.164254312027618,0.519254429183621,0.232420756919918,0.241718899183244,0.200506470303285,0.0920809889358963,0.574072240823034,0.546273504020151,0.524497659837696,0,0.0770153371044148,0.784349769176855,0,0.105551628892876,1.13733384070897,0.170093705276516,0,0,0,0.501689773854853,0,0,0,0,0.261435451024901,0,0.328014645699706,0,0.206082023295445,0.183138929636687,0.082509499920588,0,0.650060246036521,0,0.290012154876366,0,0.15350367472613,0,0,0.145016693914229,0.0852266274161009,0.0890320356467374,0.330569830721956,0.192190067365106,0.127612712494584,0,0.464845549297286,0.62962469366128,0,0.308033580176089,0,0,0,0.286249773483982,0,0.316379424718726,0.190630193923825,0.255897791311334,0,0.636406495851874,0,0,0,0,0.202182481573316,0,0,0.48763373908959,0,1.05650146756755,0.136499911407986,0.282810863907425,0,1.10273068709225,0,1.7538035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| |||
|short_description=p3@ARMC5 | |||
}} |
Revision as of 10:17, 11 September 2013
Short description: | p3@ARMC5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_ARMC5_5end |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | -90bp_to_ENST00000538189, uc010vfo.1_5end |
EntrezGene: | ARMC5 |
HGNC: | 25781 |
UniProt: | F5H156 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.18e-27 | 76 |
hematopoietic system | 2.95e-24 | 98 |
blood island | 2.95e-24 | 98 |
bone element | 3.94e-24 | 82 |
skeletal element | 4.69e-21 | 90 |
hemolymphoid system | 6.16e-21 | 108 |
immune system | 4.84e-20 | 93 |
skeletal system | 6.42e-18 | 100 |
connective tissue | 2.75e-16 | 371 |
lateral plate mesoderm | 9.32e-14 | 203 |
musculoskeletal system | 4.54e-10 | 167 |
mesoderm | 1.66e-07 | 315 |
mesoderm-derived structure | 1.66e-07 | 315 |
presumptive mesoderm | 1.66e-07 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.