FFCP PHASE1:Hg19::chr17:8230085..8230130,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C140|description=CAGE_peak_at_chr17:8230085..8230130,+|id=chr17:8230085..8230130,+|ontology_enrichment_celltype=CL:0002139!1.07e-26!24;CL:0000115!3.07e-26!35;CL:0000071!1.96e-20!18;CL:0002546!1.96e-20!18;CL:0002078!2.64e-18!44;CL:0000213!5.46e-14!57;CL:0000215!5.46e-14!57;CL:1000413!3.20e-11!9;CL:0002544!5.03e-08!6;CL:0002543!8.32e-08!6;CL:0005020!8.32e-08!6;CL:0002138!8.32e-08!6;CL:0005022!8.32e-08!6|ontology_enrichment_celltype_v019=CL:0002139;1.48e-69;24!CL:0000115;9.27e-64;36!CL:0000071;4.35e-51;18!CL:0002078;1.66e-35;45!CL:1000413;1.26e-29;9!CL:0000213;2.62e-25;58!CL:0000215;2.62e-25;58!CL:0002544;2.99e-20;6!CL:0002138;8.39e-20;6!CL:0002543;9.11e-20;6!CL:0002188;1.55e-11;5!CL:0002618;7.31e-11;3!CL:1000746;3.12e-08;7!CL:1000612;3.12e-08;7!CL:0002262;5.11e-08;2!CL:1000398;5.11e-08;2!CL:0000076;5.93e-08;63!CL:0002545;1.01e-07;2|ontology_enrichment_celltype_v019_2=CL:0000115,2.81e-73,36;CL:0002139,7.49e-70,24;CL:0002078,5.06e-57,45;CL:0000071,2.33e-51,18;CL:0002546,2.33e-51,18;CL:0000213,1.86e-42,58;CL:0000215,1.86e-42,58;CL:1000413,7.92e-30,9;CL:0002544,1.85e-20,6;CL:0002543,8.01e-20,6;CL:0005020,8.01e-20,6;CL:0002138,8.01e-20,6;CL:0005022,8.01e-20,6;CL:0000222,2.46e-16,121;CL:0002188,1.38e-11,5;CL:0000076,1.55e-11,63;CL:0002618,6.62e-11,3;CL:1000746,2.87e-08,7;CL:1000612,2.87e-08,7;CL:0002262,5.11e-08,2;CL:1000398,5.11e-08,2;CL:0002545,8.24e-08,2|ontology_enrichment_development_v019=CL:0002546;4.35e-51;18!CL:0005022;8.39e-20;6!CL:0000222;2.48e-07;121|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001986!1.96e-20!18;UBERON:0004638!1.96e-20!18;UBERON:0004852!1.96e-20!18;UBERON:0007023!2.69e-18!115;UBERON:0000487!6.21e-17!22;UBERON:0006914!5.36e-14!25;UBERON:0001009!1.31e-12!113;UBERON:0002049!1.63e-11!79;UBERON:0007798!1.63e-11!79;UBERON:0003915!3.20e-11!9;UBERON:0004700!3.20e-11!9;UBERON:0001917!3.20e-11!9;UBERON:0004535!4.12e-11!110;UBERON:0000055!5.95e-11!69;UBERON:0004872!7.29e-10!84;UBERON:0001981!3.52e-08!60;UBERON:0007500!3.52e-08!60;UBERON:0004537!3.52e-08!60;UBERON:0006965!3.52e-08!60;UBERON:0001638!1.11e-07!9;UBERON:0003920!1.11e-07!9;UBERON:0004582!1.11e-07!9;UBERON:0000477!2.93e-07!286;UBERON:0004111!5.63e-07!241;UBERON:0003914!6.08e-07!118|ontology_enrichment_uberon_v019=UBERON:0004638;4.35e-51;18!UBERON:0001986;4.35e-51;18!UBERON:0004852;4.35e-51;18!UBERON:0000487;5.69e-41;22!UBERON:0006914;1.65e-35;25!UBERON:0003915;1.26e-29;9!UBERON:0004700;1.26e-29;9!UBERON:0001917;1.26e-29;9!UBERON:0000490;7.94e-24;33!UBERON:0001638;1.90e-17;9!UBERON:0003920;1.90e-17;9!UBERON:0004582;1.90e-17;9!UBERON:0000055;5.78e-17;65!UBERON:0001473;1.11e-14;8!UBERON:0004536;1.11e-14;8!UBERON:0006558;1.11e-14;8!UBERON:0007500;4.34e-12;56!UBERON:0001981;4.34e-12;56!UBERON:0004537;4.34e-12;56!UBERON:0002465;1.33e-11;10!UBERON:0003914;1.09e-10;74!UBERON:0002049;1.65e-10;75!UBERON:0007798;1.65e-10;75!UBERON:0000074;3.12e-08;7!UBERON:0001229;3.12e-08;7!UBERON:0001281;5.11e-08;2!UBERON:0003497;5.11e-08;2!UBERON:0003909;5.11e-08;2!UBERON:0003835;5.11e-08;2!UBERON:0000353;7.78e-08;15!UBERON:0005800;1.01e-07;2!UBERON:0001515;1.01e-07;2!UBERON:0000025;2.15e-07;93!UBERON:0001009;8.40e-07;112!UBERON:0004535;9.77e-07;109|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.33e-51,18;UBERON:0001986,2.33e-51,18;UBERON:0004852,2.33e-51,18;UBERON:0000487,3.43e-41,22;UBERON:0006914,1.06e-35,25;UBERON:0003915,7.92e-30,9;UBERON:0004700,7.92e-30,9;UBERON:0001917,7.92e-30,9;UBERON:0000055,3.36e-27,68;UBERON:0002049,8.03e-23,78;UBERON:0007798,8.03e-23,78;UBERON:0007500,3.88e-18,59;UBERON:0001981,3.88e-18,59;UBERON:0004537,3.88e-18,59;UBERON:0006965,3.88e-18,59;UBERON:0001638,1.98e-17,9;UBERON:0003920,1.98e-17,9;UBERON:0004582,1.98e-17,9;UBERON:0004535,4.13e-17,109;UBERON:0001009,1.85e-16,112;UBERON:0001473,1.07e-14,8;UBERON:0004536,1.07e-14,8;UBERON:0006558,1.07e-14,8;UBERON:0003914,3.41e-14,117;UBERON:0004872,3.88e-14,83;UBERON:0002465,1.29e-11,10;UBERON:0004111,1.86e-08,240;UBERON:0010532,2.87e-08,7;UBERON:0000074,2.87e-08,7;UBERON:0001229,2.87e-08,7;UBERON:0001230,2.87e-08,7;UBERON:0003220,2.87e-08,7;UBERON:0005749,2.87e-08,7;UBERON:0004199,2.87e-08,7;UBERON:0004209,2.87e-08,7;UBERON:0004198,2.87e-08,7;UBERON:0001281,5.11e-08,2;UBERON:0003497,5.11e-08,2;UBERON:0003909,5.11e-08,2;UBERON:0003835,5.11e-08,2;UBERON:0000353,7.36e-08,15;UBERON:0005800,8.24e-08,2;UBERON:0001515,8.24e-08,2;UBERON:0004876,1.18e-07,11;UBERON:0005103,3.15e-07,8;UBERON:0000083,3.15e-07,8;UBERON:0009201,3.15e-07,8;UBERON:0006553,3.15e-07,8;UBERON:0003074,3.15e-07,8;UBERON:0003060,3.15e-07,8;UBERON:0000025,9.91e-07,192|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,0,0,0,0,0,0.261185628199839,0.245733936501509,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C140 | |||
|description=CAGE_peak_at_chr17:8230085..8230130,+ | |||
|id=chr17:8230085..8230130,+ | |||
|ontology_enrichment_celltype=CL:0002139!1.07e-26!24;CL:0000115!3.07e-26!35;CL:0000071!1.96e-20!18;CL:0002546!1.96e-20!18;CL:0002078!2.64e-18!44;CL:0000213!5.46e-14!57;CL:0000215!5.46e-14!57;CL:1000413!3.20e-11!9;CL:0002544!5.03e-08!6;CL:0002543!8.32e-08!6;CL:0005020!8.32e-08!6;CL:0002138!8.32e-08!6;CL:0005022!8.32e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.48e-69;24!CL:0000115;9.27e-64;36!CL:0000071;4.35e-51;18!CL:0002078;1.66e-35;45!CL:1000413;1.26e-29;9!CL:0000213;2.62e-25;58!CL:0000215;2.62e-25;58!CL:0002544;2.99e-20;6!CL:0002138;8.39e-20;6!CL:0002543;9.11e-20;6!CL:0002188;1.55e-11;5!CL:0002618;7.31e-11;3!CL:1000746;3.12e-08;7!CL:1000612;3.12e-08;7!CL:0002262;5.11e-08;2!CL:1000398;5.11e-08;2!CL:0000076;5.93e-08;63!CL:0002545;1.01e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,2.81e-73,36;CL:0002139,7.49e-70,24;CL:0002078,5.06e-57,45;CL:0000071,2.33e-51,18;CL:0002546,2.33e-51,18;CL:0000213,1.86e-42,58;CL:0000215,1.86e-42,58;CL:1000413,7.92e-30,9;CL:0002544,1.85e-20,6;CL:0002543,8.01e-20,6;CL:0005020,8.01e-20,6;CL:0002138,8.01e-20,6;CL:0005022,8.01e-20,6;CL:0000222,2.46e-16,121;CL:0002188,1.38e-11,5;CL:0000076,1.55e-11,63;CL:0002618,6.62e-11,3;CL:1000746,2.87e-08,7;CL:1000612,2.87e-08,7;CL:0002262,5.11e-08,2;CL:1000398,5.11e-08,2;CL:0002545,8.24e-08,2 | |||
|ontology_enrichment_development_v019=CL:0002546;4.35e-51;18!CL:0005022;8.39e-20;6!CL:0000222;2.48e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!1.96e-20!18;UBERON:0004638!1.96e-20!18;UBERON:0004852!1.96e-20!18;UBERON:0007023!2.69e-18!115;UBERON:0000487!6.21e-17!22;UBERON:0006914!5.36e-14!25;UBERON:0001009!1.31e-12!113;UBERON:0002049!1.63e-11!79;UBERON:0007798!1.63e-11!79;UBERON:0003915!3.20e-11!9;UBERON:0004700!3.20e-11!9;UBERON:0001917!3.20e-11!9;UBERON:0004535!4.12e-11!110;UBERON:0000055!5.95e-11!69;UBERON:0004872!7.29e-10!84;UBERON:0001981!3.52e-08!60;UBERON:0007500!3.52e-08!60;UBERON:0004537!3.52e-08!60;UBERON:0006965!3.52e-08!60;UBERON:0001638!1.11e-07!9;UBERON:0003920!1.11e-07!9;UBERON:0004582!1.11e-07!9;UBERON:0000477!2.93e-07!286;UBERON:0004111!5.63e-07!241;UBERON:0003914!6.08e-07!118 | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.33e-51,18;UBERON:0001986,2.33e-51,18;UBERON:0004852,2.33e-51,18;UBERON:0000487,3.43e-41,22;UBERON:0006914,1.06e-35,25;UBERON:0003915,7.92e-30,9;UBERON:0004700,7.92e-30,9;UBERON:0001917,7.92e-30,9;UBERON:0000055,3.36e-27,68;UBERON:0002049,8.03e-23,78;UBERON:0007798,8.03e-23,78;UBERON:0007500,3.88e-18,59;UBERON:0001981,3.88e-18,59;UBERON:0004537,3.88e-18,59;UBERON:0006965,3.88e-18,59;UBERON:0001638,1.98e-17,9;UBERON:0003920,1.98e-17,9;UBERON:0004582,1.98e-17,9;UBERON:0004535,4.13e-17,109;UBERON:0001009,1.85e-16,112;UBERON:0001473,1.07e-14,8;UBERON:0004536,1.07e-14,8;UBERON:0006558,1.07e-14,8;UBERON:0003914,3.41e-14,117;UBERON:0004872,3.88e-14,83;UBERON:0002465,1.29e-11,10;UBERON:0004111,1.86e-08,240;UBERON:0010532,2.87e-08,7;UBERON:0000074,2.87e-08,7;UBERON:0001229,2.87e-08,7;UBERON:0001230,2.87e-08,7;UBERON:0003220,2.87e-08,7;UBERON:0005749,2.87e-08,7;UBERON:0004199,2.87e-08,7;UBERON:0004209,2.87e-08,7;UBERON:0004198,2.87e-08,7;UBERON:0001281,5.11e-08,2;UBERON:0003497,5.11e-08,2;UBERON:0003909,5.11e-08,2;UBERON:0003835,5.11e-08,2;UBERON:0000353,7.36e-08,15;UBERON:0005800,8.24e-08,2;UBERON:0001515,8.24e-08,2;UBERON:0004876,1.18e-07,11;UBERON:0005103,3.15e-07,8;UBERON:0000083,3.15e-07,8;UBERON:0009201,3.15e-07,8;UBERON:0006553,3.15e-07,8;UBERON:0003074,3.15e-07,8;UBERON:0003060,3.15e-07,8;UBERON:0000025,9.91e-07,192 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,0,0,0,0,0,0.261185628199839,0.245733936501509,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767175371061182,0,0,0.144846518960824,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,3.57772333260069,7.74211135595512,6.2485290289367,3.39184765154406,5.03399323451887,5.50236083880135,3.55291443112578,5.68516870172524,4.62496141492723,7.02913286805807,4.83395180530976,0.760272105718513,12.4471649349566,1.83831540172934,9.72170337458112,5.09008451219255,3.36794058939255,3.82879033643296,3.06633274931766,2.84779697870439,4.946447086121,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0.622422070799533,0.808264032418128,0.653847612453835,0.302714855289863,0,0,0.312160076830321,0.570471821544449,0.149448680551801,0.117434498643765,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0.132529768321485,0.116193942869518,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,5.90524363699719,4.20725321410337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,2.88732895522148,1.85194205030644,3.04406643575357,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0.088048434013226,0.414656231081544,0.576479813667846,0.37872730027914,0,0,0,1.71072446022705,0,0,0,0,0,0,0.258543431515556,7.15312891703765,2.535908257668,0,0,0,0,0.266422179016099,0,1.08524321078289,0,0.977208552881205,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0.232420756919918,0,0,0,0,0,0,0,0,0,1.46139224653261,0,3.4120015221269,4.76262374774244,5.82972973475776,29.303178011155,0,0,0,0,0,0,0,0,0,0.325378394664303,0.618246069886334,0,0,0,0,0,0,0,0.15350367472613,0,0,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0.190630193923825,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0.349934720244983,0,0,0,0.376575203107117,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0.635020748171649,0,0.280797178113459,0,0,7.51903431270201,1.18504244461122,0,0,0,0,0.307240764308458,0,0,0,1.11362469558097,0,0.270455678475983,7.32758329595204,2.81974010175699,0,15.9693915406364,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.996239941255349,0.276283915531148,0,0,0,0,0,0,0.511572370226872,0.887790650732402,0,0,0,0,0,0,0,5.79999660347835,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.461701551022782,0,0,0,0,0,0,0,0,0.156980256395025,0.166211681900156,0,0,0,0,1.11255605286265,0,0,0,0,1.99052386215701,1.59223616106011,0,0,0,0,0.067401132980677,4.81546588379273,0,0,0,0,0.394584402849391,0,0,1.13735843331278,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.678923115418936,0,0.225980740780532,0,0.397429223405979,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.458320848023367,0.717873024576814,0.998395002494955,0.858452096273142,0.669514372325618,0.53746777989381,0,0,0,0,0,0,0,0,0.136203406111576,0.160753148465019,0,0,0,0,0.0607495566580247,0,0.551639951094387,1.15400093896996,0,0,0,2.1440859791201,1.32418394073086,0,0,0,0,0,0,0.340776043570843,0.679872549120754,0.439656701034247,0,0,0.13223260174269,0,0,0.427149650270779,0.314408610199332,1.24271716604159,0.496166021811951,0,0,0,4.35214242695579,7.520696820681,3.36980134439808,3.27872630709804,0,0,0,0,0.573409195690071,0.221858103073705,0.124192805882767,0,0,0,0,0,0,0,0,0.467426619694449,0.554805861502613,0,0,0,0,0.151230923763239,0,0,0,0.449803112163605,0,0,0,0,0.150257608997218,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0.853533837553127,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0.318004350653419,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.676892955143315,0.40341013740704,0,0,0,0,0.0675375846183947,0,0,0.126831620387814,0.546974809018219,0,2.48105589194647,0,0,0,0,0.606965604236632,0,0.79832133146375,0,0,0,0.131545547125698,0,0,0.627944742804112,0,0,0.913158720509496,0,0,0.500335809236594,0,0,0.173858272302579,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,1.95059333026869,0,0.485710993059139,0,0,0.118920090777569,0,0,0.452888530700021,0.154348316215889,0,0,0.245148321753905,0,0.196308467114945,0.297046400327086,0,0,0.281951753939561,0.709036767709349,0,0,0,0,0,0,0,0,0.0679914901909147,0,0.5290268405154,0,0,0,0.126166424835079,0,0.126698501011437,0,0,0,0,1.06090177505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| |||
|short_description=p@chr17:8230085..8230130,+ | |||
}} |
Revision as of 16:42, 11 September 2013
Short description: | p@chr17:8230085..8230130, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:8230085..8230130, + |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 2.81e-73 | 36 |
endothelial cell of vascular tree | 7.49e-70 | 24 |
meso-epithelial cell | 5.06e-57 | 45 |
blood vessel endothelial cell | 2.33e-51 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.33e-51 | 18 |
lining cell | 1.86e-42 | 58 |
barrier cell | 1.86e-42 | 58 |
endothelial cell of artery | 7.92e-30 | 9 |
aortic endothelial cell | 1.85e-20 | 6 |
vein endothelial cell | 8.01e-20 | 6 |
lymphangioblast | 8.01e-20 | 6 |
endothelial cell of lymphatic vessel | 8.01e-20 | 6 |
vascular lymphangioblast | 8.01e-20 | 6 |
mesodermal cell | 2.46e-16 | 121 |
glomerular endothelial cell | 1.38e-11 | 5 |
squamous epithelial cell | 1.55e-11 | 63 |
endothelial cell of umbilical vein | 6.62e-11 | 3 |
glomerular cell | 2.87e-08 | 7 |
kidney corpuscule cell | 2.87e-08 | 7 |
endothelial cell of sinusoid | 5.11e-08 | 2 |
endothelial cell of hepatic sinusoid | 5.11e-08 | 2 |
thoracic aorta endothelial cell | 8.24e-08 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.