FFCP PHASE1:Hg19::chr18:3448314..3448333,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7050|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11776|TSSclassifier=S|UniProt=F8VUY0|association_with_transcript=-163bp_to_ENST00000549780_5end|coexpression_cluster_id=C1148|description=CAGE_peak_18_at_TGIF1_5end|id=chr18:3448314..3448333,+|ontology_enrichment_celltype=CL:0000766!2.50e-30!76;CL:0002057!3.16e-28!42;CL:0000860!4.31e-28!45;CL:0000738!1.52e-27!140;CL:0000557!4.81e-26!71;CL:0000839!1.98e-25!70;CL:0002009!1.41e-24!65;CL:0002194!4.73e-24!63;CL:0000576!4.73e-24!63;CL:0000040!4.73e-24!63;CL:0000559!4.73e-24!63;CL:0002031!3.37e-22!124;CL:0002087!6.16e-21!119;CL:0000037!4.05e-20!172;CL:0000566!4.05e-20!172;CL:0000763!7.05e-20!112;CL:0000049!7.05e-20!112;CL:0002032!4.22e-19!165;CL:0000837!4.22e-19!165;CL:0000988!5.82e-19!182;CL:0002393!3.86e-07!9;CL:0002397!3.86e-07!9;CL:0000094!5.80e-07!8|ontology_enrichment_celltype_v019=CL:0000860;2.12e-55;33!CL:0002057;2.12e-55;33!CL:0000576;1.48e-44;48!CL:0000473;3.43e-43;39!CL:0000234;3.43e-43;39!CL:0000766;6.31e-38;69!CL:0000763;5.23e-20;100!CL:0000094;5.00e-19;8!CL:0002087;2.95e-18;104!CL:0000738;2.34e-15;136!CL:0002393;4.11e-14;6!CL:0002397;4.11e-14;6!CL:0000081;2.11e-13;11!CL:0000988;1.54e-09;177!CL:0000767;1.45e-08;3!CL:0000623;5.38e-08;3!CL:0000219;6.36e-08;193!CL:0000875;1.89e-07;3!CL:0000775;1.89e-07;3!CL:0002396;1.89e-07;3!CL:0000791;7.31e-07;18!CL:0000789;7.31e-07;18!CL:0002419;7.31e-07;18|ontology_enrichment_celltype_v019_2=CL:0000766,8.82e-83,72;CL:0000860,3.73e-79,42;CL:0002057,3.73e-79,42;CL:0000473,7.28e-76,48;CL:0000234,7.28e-76,48;CL:0000738,7.52e-72,136;CL:0000557,6.77e-68,67;CL:0000839,5.84e-66,66;CL:0002031,3.65e-62,120;CL:0002009,7.86e-62,61;CL:0002194,3.47e-61,59;CL:0000576,3.47e-61,59;CL:0000040,3.47e-61,59;CL:0000559,3.47e-61,59;CL:0002032,9.96e-60,161;CL:0000837,9.96e-60,161;CL:0000037,1.62e-58,168;CL:0000763,6.82e-57,108;CL:0000049,6.82e-57,108;CL:0002087,8.42e-56,115;CL:0000988,1.19e-54,177;CL:0000134,3.29e-20,354;CL:0002393,5.34e-20,9;CL:0002397,5.34e-20,9;CL:0002320,1.80e-19,361;CL:0000094,2.03e-19,8;CL:0000219,7.13e-17,386;CL:0000048,4.45e-15,427;CL:0000723,1.28e-14,433;CL:0000034,5.02e-14,441;CL:0000081,1.12e-13,11;CL:0000767,1.32e-08,3;CL:0000623,4.63e-08,3;CL:0000825,4.63e-08,3;CL:0000775,9.92e-08,3;CL:0000875,1.95e-07,3;CL:0002396,1.95e-07,3;CL:0000791,7.86e-07,18;CL:0000789,7.86e-07,18;CL:0002420,7.86e-07,18;CL:0002419,7.86e-07,18;CL:0000790,7.86e-07,18|ontology_enrichment_development_v019=CL:0002057;1.86e-56;42!CL:0000049;1.55e-16;108!CL:0000790;7.31e-07;18|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!5.23e-24!80;UBERON:0002390!1.18e-23!102;UBERON:0003061!1.18e-23!102;UBERON:0001474!6.59e-22!86;UBERON:0002193!1.12e-19!112;UBERON:0004765!1.56e-17!101;UBERON:0001434!1.56e-17!101;UBERON:0002405!5.63e-14!115;UBERON:0002204!1.31e-07!167|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.34e-58,76;UBERON:0001474,3.75e-53,82;UBERON:0002405,1.38e-47,93;UBERON:0004765,2.77e-47,90;UBERON:0002390,1.06e-46,98;UBERON:0003061,1.06e-46,98;UBERON:0001434,2.89e-41,100;UBERON:0002193,3.89e-41,108;UBERON:0002204,1.02e-21,167;UBERON:0002384,1.83e-18,371;UBERON:0003081,1.65e-17,203;UBERON:0000926,5.84e-08,315;UBERON:0004120,5.84e-08,315;UBERON:0006603,5.84e-08,315|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0.522371256399677,0,0,0,0,0.37129905888014,0,0,0,0,0.487932798790507,0.123121058076788,0.204000691244253,0.313454721478088,0,0.273748850145768,0.251085279189606,0,0,0,2.75354993794233,3.0706351847777,3.56077083626975,0,0.30120591877825,0.369754010166788,0,0,0.587200878669695,2.76997704265939,3.20871115952227,2.38711957787437,0,0.647787332037959,1.28787783817093,2.4717700592526,1.51150377475524,2.66842467306598,1.85943229524548,2.05583944010913,1.85823822537062,2.3015391385772,2.0492856522328,5.43909128743746,4.82643953031266,7.10033151942209,8.12558919566051,3.01187743268168,2.45615535052061,1.79778787556068,3.97909060082173,2.88836124368484,5.75403413219137,1.64925650093358,2.59302754908121,2.13112375266347,4.64334781805734,1.70215567407342,2.4912889959823,1.50749199154046,0.521482918420201,4.12658804939722,2.42159801053347,1.10483290796269,0.949387162322653,1.47878700418359,1.4882300997553,2.72556239160889,2.02191536063691,1.50176892841506,0.964353520182481,2.85012743741249,1.19350006319454,1.46131323011707,0,0.546138611262131,0,1.28019066769952,1.60158394814405,0,0.661044872784862,0.954053754535364,2.27685187643779,0,2.6759125968766,0,0,0,0.196709770113833,1.17903228824749,2.46721798799411,0.334372990781356,1.30368906653436,0.473447805734733,3.89653456815823,0.334231370655521,0.883817722424512,0.221533894583621,0.270803863765016,0.128091319725675,0.390178042679635,0.328875809207352,0.276350017785848,0.289803085735052,0.593146252648242,1.60524496853828,2.09071047609954,0.113309342697566,1.91610246800961,1.71813722741315,1.01207876807801,0.31856541432409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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7050 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11776 | |||
|TSSclassifier=S | |||
|UniProt=F8VUY0 | |||
|association_with_transcript=-163bp_to_ENST00000549780_5end | |||
|coexpression_cluster_id=C1148 | |||
|description=CAGE_peak_18_at_TGIF1_5end | |||
|id=chr18:3448314..3448333,+ | |||
|ontology_enrichment_celltype=CL:0000766!2.50e-30!76;CL:0002057!3.16e-28!42;CL:0000860!4.31e-28!45;CL:0000738!1.52e-27!140;CL:0000557!4.81e-26!71;CL:0000839!1.98e-25!70;CL:0002009!1.41e-24!65;CL:0002194!4.73e-24!63;CL:0000576!4.73e-24!63;CL:0000040!4.73e-24!63;CL:0000559!4.73e-24!63;CL:0002031!3.37e-22!124;CL:0002087!6.16e-21!119;CL:0000037!4.05e-20!172;CL:0000566!4.05e-20!172;CL:0000763!7.05e-20!112;CL:0000049!7.05e-20!112;CL:0002032!4.22e-19!165;CL:0000837!4.22e-19!165;CL:0000988!5.82e-19!182;CL:0002393!3.86e-07!9;CL:0002397!3.86e-07!9;CL:0000094!5.80e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.12e-55;33!CL:0002057;2.12e-55;33!CL:0000576;1.48e-44;48!CL:0000473;3.43e-43;39!CL:0000234;3.43e-43;39!CL:0000766;6.31e-38;69!CL:0000763;5.23e-20;100!CL:0000094;5.00e-19;8!CL:0002087;2.95e-18;104!CL:0000738;2.34e-15;136!CL:0002393;4.11e-14;6!CL:0002397;4.11e-14;6!CL:0000081;2.11e-13;11!CL:0000988;1.54e-09;177!CL:0000767;1.45e-08;3!CL:0000623;5.38e-08;3!CL:0000219;6.36e-08;193!CL:0000875;1.89e-07;3!CL:0000775;1.89e-07;3!CL:0002396;1.89e-07;3!CL:0000791;7.31e-07;18!CL:0000789;7.31e-07;18!CL:0002419;7.31e-07;18 | |||
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|ontology_enrichment_development_v019=CL:0002057;1.86e-56;42!CL:0000049;1.55e-16;108!CL:0000790;7.31e-07;18 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.23e-24!80;UBERON:0002390!1.18e-23!102;UBERON:0003061!1.18e-23!102;UBERON:0001474!6.59e-22!86;UBERON:0002193!1.12e-19!112;UBERON:0004765!1.56e-17!101;UBERON:0001434!1.56e-17!101;UBERON:0002405!5.63e-14!115;UBERON:0002204!1.31e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
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| |||
|short_description=p18@TGIF1 | |||
}} |
Revision as of 17:22, 11 September 2013
Short description: | p18@TGIF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_18_at_TGIF1_5end |
Coexpression cluster: | C1148_CD14_Eosinophils_Mast_Neutrophils_CD14CD16_blood_Basophils |
Association with transcript: | -163bp_to_ENST00000549780_5end |
EntrezGene: | TGIF1 |
HGNC: | 11776 |
UniProt: | F8VUY0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.34e-58 | 76 |
bone element | 3.75e-53 | 82 |
immune system | 1.38e-47 | 93 |
skeletal element | 2.77e-47 | 90 |
hematopoietic system | 1.06e-46 | 98 |
blood island | 1.06e-46 | 98 |
skeletal system | 2.89e-41 | 100 |
hemolymphoid system | 3.89e-41 | 108 |
musculoskeletal system | 1.02e-21 | 167 |
connective tissue | 1.83e-18 | 371 |
lateral plate mesoderm | 1.65e-17 | 203 |
mesoderm | 5.84e-08 | 315 |
mesoderm-derived structure | 5.84e-08 | 315 |
presumptive mesoderm | 5.84e-08 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.