FFCP PHASE1:Hg19::chr19:12992190..12992203,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1777|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2960|TSSclassifier=S|UniProt=B7Z4K6|association_with_transcript=59bp_to_ENST00000538460_5end|coexpression_cluster_id=C65|description=CAGE_peak_4_at_DNASE2_5end|id=chr19:12992190..12992203,-|ontology_enrichment_celltype=CL:0002194!7.76e-39!63;CL:0000576!7.76e-39!63;CL:0000040!7.76e-39!63;CL:0000559!7.76e-39!63;CL:0002009!1.89e-36!65;CL:0000839!5.52e-32!70;CL:0000860!1.30e-30!45;CL:0000766!2.67e-30!76;CL:0000557!3.40e-30!71;CL:0002057!5.64e-30!42;CL:0000763!1.42e-16!112;CL:0000049!1.42e-16!112;CL:0002087!4.74e-15!119;CL:0000738!5.09e-12!140;CL:0002031!3.41e-11!124;CL:0000037!5.00e-08!172;CL:0000566!5.00e-08!172;CL:0002032!6.14e-07!165;CL:0000837!6.14e-07!165|ontology_enrichment_celltype_v019=CL:0000860;1.04e-56;33!CL:0002057;1.04e-56;33!CL:0000473;3.52e-56;39!CL:0000234;3.52e-56;39!CL:0000576;8.14e-53;48!CL:0000766;1.56e-36;69!CL:0000763;1.65e-17;100!CL:0002087;1.97e-13;104!CL:0000235;3.59e-12;6!CL:0000738;2.09e-11;136!CL:0002393;3.88e-11;6!CL:0002397;3.88e-11;6!CL:0002619;2.30e-07;3|ontology_enrichment_celltype_v019_2=CL:0002194,7.58e-95,59;CL:0000576,7.58e-95,59;CL:0000040,7.58e-95,59;CL:0000559,7.58e-95,59;CL:0002009,3.42e-91,61;CL:0000473,2.30e-84,48;CL:0000234,2.30e-84,48;CL:0000766,6.60e-84,72;CL:0000839,5.16e-83,66;CL:0000557,1.60e-81,67;CL:0000860,4.20e-73,42;CL:0002057,4.20e-73,42;CL:0000763,8.82e-54,108;CL:0000049,8.82e-54,108;CL:0002087,3.43e-49,115;CL:0000738,3.67e-47,136;CL:0002031,4.71e-43,120;CL:0000037,4.21e-37,168;CL:0000988,3.29e-34,177;CL:0002032,4.52e-34,161;CL:0000837,4.52e-34,161;CL:0000134,1.49e-16,354;CL:0002320,8.13e-16,361;CL:0000219,7.95e-14,386;CL:0002393,3.22e-12,9;CL:0002397,3.22e-12,9;CL:0000235,3.45e-12,6;CL:0000048,1.06e-11,427;CL:0000723,3.05e-11,433;CL:0000034,3.63e-11,441;CL:0002619,2.31e-07,3|ontology_enrichment_development_v019=CL:0002057;5.52e-52;42!CL:0000049;2.44e-17;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!2.29e-26!80;UBERON:0001474!7.01e-24!86;UBERON:0002390!2.53e-22!102;UBERON:0003061!2.53e-22!102;UBERON:0002405!6.59e-22!115;UBERON:0002193!7.78e-21!112;UBERON:0004765!2.03e-18!101;UBERON:0001434!2.03e-18!101;UBERON:0002204!2.27e-10!167;UBERON:0000062!8.30e-09!511;UBERON:0000468!9.60e-07!659|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.59e-73,76;UBERON:0001474,8.63e-69,82;UBERON:0004765,4.20e-61,90;UBERON:0002405,1.77e-58,93;UBERON:0002390,1.51e-56,98;UBERON:0003061,1.51e-56,98;UBERON:0001434,3.22e-53,100;UBERON:0002193,1.46e-51,108;UBERON:0002204,3.69e-28,167;UBERON:0003081,1.73e-24,203;UBERON:0002384,8.18e-15,371;UBERON:0000926,1.43e-13,315;UBERON:0004120,1.43e-13,315;UBERON:0006603,1.43e-13,315|phase1_expression=0,0.856402095563933,0.704772020479856,1.0007329835313,1.34088328328186,0,0,0.631719873426831,0,0.245733936501509,0.697801167972428,0.218441372130172,0,0.123766352960047,0,0,0,0,0.487932798790507,0.123121058076788,0,0,0,0.136874425072884,0.125542639594803,0.0764134057479513,0.164201178899891,0.236132343941038,4.72037132218685,3.83829398097213,7.43117391917165,0,0,0.369754010166788,0,0,0.293600439334847,4.43196326825502,2.80762226458198,3.25516306073778,30.0046735481499,19.4336199611388,32.4545215219075,25.8808865027625,73.307933075629,38.5708657288628,17.664606804832,67.4315336355794,28.4929861223495,5.46615545412086,33.8132132618413,12.7700404139836,8.61864201841546,23.8829332926016,9.47985406160392,22.40083840557,60.3122591627839,27.4162651023003,16.2224462956578,60.3346570903056,24.9341479061626,12.2044981069085,42.0868317581643,20.885012776102,6.38460324982885,27.2344907851747,8.09668923694247,8.79370328398601,18.7733850631273,10.4250645458456,10.2917915447673,29.4622108790052,12.9749578850763,4.85887158517466,4.25208599930087,3.14487968262564,5.95341745076424,2.85336096398862,2.57160938715328,2.28010194992999,1.79025009479181,0.91332076882317,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,2.34894875748376,2.29363936875137,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0,0,0,0.670700859703636,0.511450247374121,1.44575660953827,1.00267582127178,0.579386075843295,0,0,0.0945348171640679,0.221729397462564,0.351339142772504,0.327447688744282,0.364295288292542,0.741568885568859,0.649094787309367,1.74129737299267,3.0580330919339,2.62339686735876,2.28797964312051,3.34311751196608,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0.264818361626438,1.14734648299525,0.709336764396714,0,0,0.24666754841716,0,0,0.163461903113459,0,0.576175924479999,0,0,0,0,0,0,0,0.204154171254893,0,0.103325781175765,0,0.247266929278557,0,0.718618141816238,0,0,0,0,0.30648779579902,0,0,0,0,0,0.600182192168805,0.206105058476878,0.515281080091258,0,0.168776332241266,0.487185025805993,0.252433774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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1777 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2960 | |||
|TSSclassifier=S | |||
|UniProt=B7Z4K6 | |||
|association_with_transcript=59bp_to_ENST00000538460_5end | |||
|coexpression_cluster_id=C65 | |||
|description=CAGE_peak_4_at_DNASE2_5end | |||
|id=chr19:12992190..12992203,- | |||
|ontology_enrichment_celltype=CL:0002194!7.76e-39!63;CL:0000576!7.76e-39!63;CL:0000040!7.76e-39!63;CL:0000559!7.76e-39!63;CL:0002009!1.89e-36!65;CL:0000839!5.52e-32!70;CL:0000860!1.30e-30!45;CL:0000766!2.67e-30!76;CL:0000557!3.40e-30!71;CL:0002057!5.64e-30!42;CL:0000763!1.42e-16!112;CL:0000049!1.42e-16!112;CL:0002087!4.74e-15!119;CL:0000738!5.09e-12!140;CL:0002031!3.41e-11!124;CL:0000037!5.00e-08!172;CL:0000566!5.00e-08!172;CL:0002032!6.14e-07!165;CL:0000837!6.14e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.04e-56;33!CL:0002057;1.04e-56;33!CL:0000473;3.52e-56;39!CL:0000234;3.52e-56;39!CL:0000576;8.14e-53;48!CL:0000766;1.56e-36;69!CL:0000763;1.65e-17;100!CL:0002087;1.97e-13;104!CL:0000235;3.59e-12;6!CL:0000738;2.09e-11;136!CL:0002393;3.88e-11;6!CL:0002397;3.88e-11;6!CL:0002619;2.30e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,7.58e-95,59;CL:0000576,7.58e-95,59;CL:0000040,7.58e-95,59;CL:0000559,7.58e-95,59;CL:0002009,3.42e-91,61;CL:0000473,2.30e-84,48;CL:0000234,2.30e-84,48;CL:0000766,6.60e-84,72;CL:0000839,5.16e-83,66;CL:0000557,1.60e-81,67;CL:0000860,4.20e-73,42;CL:0002057,4.20e-73,42;CL:0000763,8.82e-54,108;CL:0000049,8.82e-54,108;CL:0002087,3.43e-49,115;CL:0000738,3.67e-47,136;CL:0002031,4.71e-43,120;CL:0000037,4.21e-37,168;CL:0000988,3.29e-34,177;CL:0002032,4.52e-34,161;CL:0000837,4.52e-34,161;CL:0000134,1.49e-16,354;CL:0002320,8.13e-16,361;CL:0000219,7.95e-14,386;CL:0002393,3.22e-12,9;CL:0002397,3.22e-12,9;CL:0000235,3.45e-12,6;CL:0000048,1.06e-11,427;CL:0000723,3.05e-11,433;CL:0000034,3.63e-11,441;CL:0002619,2.31e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;5.52e-52;42!CL:0000049;2.44e-17;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.29e-26!80;UBERON:0001474!7.01e-24!86;UBERON:0002390!2.53e-22!102;UBERON:0003061!2.53e-22!102;UBERON:0002405!6.59e-22!115;UBERON:0002193!7.78e-21!112;UBERON:0004765!2.03e-18!101;UBERON:0001434!2.03e-18!101;UBERON:0002204!2.27e-10!167;UBERON:0000062!8.30e-09!511;UBERON:0000468!9.60e-07!659 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.59e-73,76;UBERON:0001474,8.63e-69,82;UBERON:0004765,4.20e-61,90;UBERON:0002405,1.77e-58,93;UBERON:0002390,1.51e-56,98;UBERON:0003061,1.51e-56,98;UBERON:0001434,3.22e-53,100;UBERON:0002193,1.46e-51,108;UBERON:0002204,3.69e-28,167;UBERON:0003081,1.73e-24,203;UBERON:0002384,8.18e-15,371;UBERON:0000926,1.43e-13,315;UBERON:0004120,1.43e-13,315;UBERON:0006603,1.43e-13,315 | |||
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| |||
|short_description=p4@DNASE2 | |||
}} |
Revision as of 18:50, 11 September 2013
Short description: | p4@DNASE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_DNASE2_5end |
Coexpression cluster: | C65_CD14_Eosinophils_Monocytederived_Basophils_immature_Macrophage_Neutrophils |
Association with transcript: | 59bp_to_ENST00000538460_5end |
EntrezGene: | DNASE2 |
HGNC: | 2960 |
UniProt: | B7Z4K6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.59e-73 | 76 |
bone element | 8.63e-69 | 82 |
skeletal element | 4.20e-61 | 90 |
immune system | 1.77e-58 | 93 |
hematopoietic system | 1.51e-56 | 98 |
blood island | 1.51e-56 | 98 |
skeletal system | 3.22e-53 | 100 |
hemolymphoid system | 1.46e-51 | 108 |
musculoskeletal system | 3.69e-28 | 167 |
lateral plate mesoderm | 1.73e-24 | 203 |
connective tissue | 8.18e-15 | 371 |
mesoderm | 1.43e-13 | 315 |
mesoderm-derived structure | 1.43e-13 | 315 |
presumptive mesoderm | 1.43e-13 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.