FFCP PHASE1:Hg19::chr19:33572114..33572123,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55094|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24658|TSSclassifier=S|UniProt=Q9BRR8|association_with_transcript=9bp_to_AL834465_5end|description=CAGE_peak_2_at_GPATCH1_5end|id=chr19:33572114..33572123,+|ontology_enrichment_celltype=CL:0000542!9.10e-09!53;CL:0000051!9.10e-09!53;CL:0000838!1.14e-08!52|ontology_enrichment_celltype_v019=CL:0000771;3.69e-07;2|ontology_enrichment_celltype_v019_2=CL:0000771,3.48e-07,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:4468;3.69e-07;2|ontology_enrichment_disease_v019_2=DOID:4468,4.17e-07,2|ontology_enrichment_uberon=UBERON:0001893!1.61e-09!34;UBERON:0007023!3.18e-09!115;UBERON:0002780!3.39e-09!41;UBERON:0001890!3.39e-09!41;UBERON:0006240!3.39e-09!41;UBERON:0002020!3.53e-09!34;UBERON:0003528!3.53e-09!34;UBERON:0002791!3.90e-09!33;UBERON:0001869!9.46e-09!32;UBERON:0003080!1.07e-08!42;UBERON:0000955!2.41e-08!69;UBERON:0006238!2.41e-08!69;UBERON:0001049!2.59e-08!57;UBERON:0005068!2.59e-08!57;UBERON:0006241!2.59e-08!57;UBERON:0007135!2.59e-08!57;UBERON:0002616!1.37e-07!59;UBERON:0001017!3.26e-07!82;UBERON:0005743!4.90e-07!86;UBERON:0002619!6.30e-07!22|ontology_enrichment_uberon_v019=UBERON:0002784;1.16e-12;4!UBERON:0002021;2.58e-10;5!UBERON:0001894;1.29e-07;7!UBERON:0001897;3.69e-07;2!UBERON:0001905;3.69e-07;2!UBERON:0002702;3.69e-07;2!UBERON:0002757;3.69e-07;2!UBERON:0010134;3.69e-07;2!UBERON:0005408;3.69e-07;2!UBERON:0010225;3.69e-07;2!UBERON:0001899;3.69e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0002784,1.23e-12,4;UBERON:0002021,2.84e-10,5;UBERON:0001894,1.33e-07,7;UBERON:0006222,1.33e-07,7;UBERON:0000073,1.99e-07,53;UBERON:0002616,1.99e-07,53;UBERON:0001897,2.74e-07,2;UBERON:0010225,2.74e-07,2;UBERON:0002702,4.42e-07,2;UBERON:0001049,5.14e-07,56;UBERON:0005068,5.14e-07,56;UBERON:0006241,5.14e-07,56;UBERON:0007135,5.14e-07,56;UBERON:0001905,5.28e-07,2;UBERON:0002757,5.28e-07,2;UBERON:0010134,5.28e-07,2;UBERON:0005408,5.28e-07,2;UBERON:0001899,5.28e-07,2;UBERON:0002780,7.49e-07,41;UBERON:0001890,7.49e-07,41;UBERON:0003080,7.49e-07,41;UBERON:0006240,7.49e-07,41|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0.872338524100369,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0.273748850145768,0.125542639594803,0.305653622991805,0.328402357799783,0.472264687882075,0,0,0,0.919421224478927,0,0,0.92960640696362,0.426507697462265,0,0,0,0,0.223915474239924,0,0.515151135268373,0.290796477559129,0,0,0,0,0,0,0,0,0,0,1.35426486594342,0,0.272906150057846,0,0,0,0,0,0.398927315243264,0.426224750532694,0,0,0,0,0,0.217188844705117,0,0,0,0.422510572623884,0.212604299965044,0,0,0.150176892841506,0,0.285012743741249,0,0.182664153764634,0,0,0.889509253863555,1.28019066769952,0.400395987036012,0.574752439954483,0.661044872784862,0.954053754535364,0,0.587237189370939,0,0,0,0.263384084775077,0.196709770113833,0.786021525498329,0.205601498999509,0,0.651844533267181,0.946895611469467,0,0,0.294605907474837,0.443067789167242,0,0.25618263945135,0.390178042679635,0.493313713811028,0,0,0.14828656316206,0,0,0.566546713487831,0,0,1.01207876807801,0.318565414324097,0.651083453856419,0.950452044448374,0.301150238155546,0.127986611154418,0,0.236777252044017,0,0.201606743224732,0,0.144824403882799,0,0.670700859703636,0,0,0,0,0,0.486634870302636,0.0945348171640679,0.221729397462564,0,0.523916301990851,0,0,0,0.174129737299267,0,0.476981248610684,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0,0.33472061276467,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0.183201743930407,1.31780417436063,0,0,0,0.12663051166458,0.529636723252875,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0.23486899728753,0,0.140450806702248,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0.179389635688862,0,0,0,0.103052529238439,0,0.18611685633159,0.675105328965065,0.194874010322397,0.504867548488229,0.0920498986422993,0.161646056818812,0,0.201504196455281,0,0.193260853163297,0,0.573609190778008,0.487894824518382,0.530119073285941,0.116193942869518,0.414644220061482,0,0.36497735907583,0,0,0,0.464367928031979,0,0.118306800039844,0,0.241011029883482,0.220587945464788,0.871517776369625,0.237270619111097,0,0.196221465125346,0,0,0,0.4115740113314,0,0,0,0,0.441463099414651,0.368965315629341,0.171567810298526,0,1.1240175325762,0,0.0925884451585296,0.325808305310325,0,0,0.115930404975077,0,0,0.462985512576611,0.380508304469197,0,0,0,0,0,0,0,0,0.0895585227028483,0.290633938513962,0,1.97065295158377,0.352193736052904,0.829312462163088,0.144119953416961,0,0.190493682876507,0,0,0,0,0,0.285826432630578,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0.179060963239896,0.112085143993527,0.197030760201927,0,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0.117141414992713,0.300946099727719,0,0,0,0.368738337083406,0,0,0,0.206768026122887,0,0.106727557803444,0,1.66435439510497,0,0,0.61384789315225,0,0.128139149255701,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=55094 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24658 | |||
|TSSclassifier=S | |||
|UniProt=Q9BRR8 | |||
|association_with_transcript=9bp_to_AL834465_5end | |||
|description=CAGE_peak_2_at_GPATCH1_5end | |||
|id=chr19:33572114..33572123,+ | |||
|ontology_enrichment_celltype=CL:0000542!9.10e-09!53;CL:0000051!9.10e-09!53;CL:0000838!1.14e-08!52 | |||
|ontology_enrichment_celltype_v019=CL:0000771;3.69e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000771,3.48e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4468;3.69e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,4.17e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001893!1.61e-09!34;UBERON:0007023!3.18e-09!115;UBERON:0002780!3.39e-09!41;UBERON:0001890!3.39e-09!41;UBERON:0006240!3.39e-09!41;UBERON:0002020!3.53e-09!34;UBERON:0003528!3.53e-09!34;UBERON:0002791!3.90e-09!33;UBERON:0001869!9.46e-09!32;UBERON:0003080!1.07e-08!42;UBERON:0000955!2.41e-08!69;UBERON:0006238!2.41e-08!69;UBERON:0001049!2.59e-08!57;UBERON:0005068!2.59e-08!57;UBERON:0006241!2.59e-08!57;UBERON:0007135!2.59e-08!57;UBERON:0002616!1.37e-07!59;UBERON:0001017!3.26e-07!82;UBERON:0005743!4.90e-07!86;UBERON:0002619!6.30e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002784;1.16e-12;4!UBERON:0002021;2.58e-10;5!UBERON:0001894;1.29e-07;7!UBERON:0001897;3.69e-07;2!UBERON:0001905;3.69e-07;2!UBERON:0002702;3.69e-07;2!UBERON:0002757;3.69e-07;2!UBERON:0010134;3.69e-07;2!UBERON:0005408;3.69e-07;2!UBERON:0010225;3.69e-07;2!UBERON:0001899;3.69e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002784,1.23e-12,4;UBERON:0002021,2.84e-10,5;UBERON:0001894,1.33e-07,7;UBERON:0006222,1.33e-07,7;UBERON:0000073,1.99e-07,53;UBERON:0002616,1.99e-07,53;UBERON:0001897,2.74e-07,2;UBERON:0010225,2.74e-07,2;UBERON:0002702,4.42e-07,2;UBERON:0001049,5.14e-07,56;UBERON:0005068,5.14e-07,56;UBERON:0006241,5.14e-07,56;UBERON:0007135,5.14e-07,56;UBERON:0001905,5.28e-07,2;UBERON:0002757,5.28e-07,2;UBERON:0010134,5.28e-07,2;UBERON:0005408,5.28e-07,2;UBERON:0001899,5.28e-07,2;UBERON:0002780,7.49e-07,41;UBERON:0001890,7.49e-07,41;UBERON:0003080,7.49e-07,41;UBERON:0006240,7.49e-07,41 | |||
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| |||
|short_description=p2@GPATCH1 | |||
}} |
Revision as of 19:57, 11 September 2013
Short description: | p2@GPATCH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_GPATCH1_5end |
Coexpression cluster: | NA |
Association with transcript: | 9bp_to_AL834465_5end |
EntrezGene: | GPATCH1 |
HGNC: | 24658 |
UniProt: | Q9BRR8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eosinophil | 3.48e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
regional part of diencephalon | 1.23e-12 | 4 |
occipital lobe | 2.84e-10 | 5 |
diencephalon | 1.33e-07 | 7 |
future diencephalon | 1.33e-07 | 7 |
regional part of nervous system | 1.99e-07 | 53 |
regional part of brain | 1.99e-07 | 53 |
dorsal plus ventral thalamus | 2.74e-07 | 2 |
thalamic complex | 2.74e-07 | 2 |
middle frontal gyrus | 4.42e-07 | 2 |
neural tube | 5.14e-07 | 56 |
neural rod | 5.14e-07 | 56 |
future spinal cord | 5.14e-07 | 56 |
neural keel | 5.14e-07 | 56 |
pineal body | 5.28e-07 | 2 |
regional part of epithalamus | 5.28e-07 | 2 |
secretory circumventricular organ | 5.28e-07 | 2 |
circumventricular organ | 5.28e-07 | 2 |
epithalamus | 5.28e-07 | 2 |
regional part of forebrain | 7.49e-07 | 41 |
forebrain | 7.49e-07 | 41 |
anterior neural tube | 7.49e-07 | 41 |
future forebrain | 7.49e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 4.17e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.